RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 IKBKEQ14164 716 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 DUOXA2Q1HG44 320 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 VN1R5Q7Z5H4 357 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 SLC7A3Q8WY07 619 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 DCTN4Q9UJW0 460 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 EIF1AYO14602 144 aaKnown RBP7.06□□□□□ -1.28
SNHG1-217ENST00000541578 GPR182O15218 404 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 DDX3YO15523 660 aaKnown RBP7.06□□□□□ -1.28
SNHG1-217ENST00000541578 DYRK3O43781 588 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 IGHA2P01877 340 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 GLB1P16278 677 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 ACAD11Q709F0 780 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.06□□□□□ -1.28
SNHG1-217ENST00000541578 CCNJLQ8IV13 435 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 MEGF10Q96KG7 1140 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 DNAJC25Q9H1X3 360 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 LIN7BQ9HAP6 207 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
SNHG1-217ENST00000541578 SOX1O00570 391 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-217ENST00000541578 ADAM11O75078 769 aa7.05□□□□□ -1.28
SNHG1-217ENST00000541578 WISP1O95388 367 aa7.05□□□□□ -1.28
SNHG1-217ENST00000541578 MAPK1P28482 360 aa7.05□□□□□ -1.28
SNHG1-217ENST00000541578 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
SNHG1-217ENST00000541578 KIAA1211Q6ZU35 1233 aa7.05□□□□□ -1.28
SNHG1-217ENST00000541578 DZIP1LQ8IYY4 767 aaKnown RBP7.05□□□□□ -1.28
SNHG1-217ENST00000541578 AGGF1Q8N302 714 aaeCLIP7.05□□□□□ -1.28
SNHG1-217ENST00000541578 FOXD4L4Q8WXT5 416 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-217ENST00000541578 ALKBH8Q96BT7 664 aaKnown RBP7.05□□□□□ -1.28
SNHG1-217ENST00000541578 TCF12Q99081 682 aa7.05□□□□□ -1.28
SNHG1-217ENST00000541578 A0A096LPE4 126 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 A0A1W2PPZ6 126 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 METTL12A8MUP2 240 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 NLRP12P59046 1061 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 HGSNATQ68CP4 663 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 Q6ZS46 218 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 TMC7Q7Z402 723 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 CCDC74AQ96AQ1 378 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 CSRNP1Q96S65 589 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 GZF1Q9H116 711 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-217ENST00000541578 EHD4Q9H223 541 aa7.04□□□□□ -1.28
SNHG1-217ENST00000541578 EIF4EBP3O60516 100 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-217ENST00000541578 ESRRAP11474 423 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-217ENST00000541578 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
SNHG1-217ENST00000541578 SPRED3Q2MJR0 410 aa7.03□□□□□ -1.28
SNHG1-217ENST00000541578 CEP41Q9BYV8 373 aa7.03□□□□□ -1.28
SNHG1-217ENST00000541578 SOX17Q9H6I2 414 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-217ENST00000541578 GADD45BO75293 160 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-217ENST00000541578 ITGB7P26010 798 aa7.02□□□□□ -1.29
SNHG1-217ENST00000541578 GRIA4P48058 902 aa7.02□□□□□ -1.29
SNHG1-217ENST00000541578 PCDH1Q08174 1060 aa7.02□□□□□ -1.29
SNHG1-217ENST00000541578 CLEC4MQ9H2X3 399 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-217ENST00000541578 NPHS2Q9NP85 383 aa7.02□□□□□ -1.29
SNHG1-217ENST00000541578 GSTM4Q03013 218 aa7.01□□□□□ -1.29
SNHG1-217ENST00000541578 PRSS36Q5K4E3 855 aa7.01□□□□□ -1.29
SNHG1-217ENST00000541578 ZSCAN29Q8IWY8 852 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-217ENST00000541578 UBL7Q96S82 380 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-217ENST00000541578 RUSC1Q9BVN2 902 aa7.01□□□□□ -1.29
SNHG1-217ENST00000541578 TREHO43280 583 aa7□□□□□ -1.29
SNHG1-217ENST00000541578 DSC3Q14574 896 aa7□□□□□ -1.29
SNHG1-217ENST00000541578 ZNF423Q2M1K9 1284 aa7□□□□□ -1.29
SNHG1-217ENST00000541578 PRR23CQ6ZRP0 262 aa7□□□□□ -1.29
SNHG1-217ENST00000541578 EPS8L3Q8TE67 593 aaKnown RBP7□□□□□ -1.29
SNHG1-217ENST00000541578 USP26Q9BXU7 913 aa7□□□□□ -1.29
SNHG1-217ENST00000541578 RNF208Q9H0X6 261 aa7□□□□□ -1.29
SNHG1-217ENST00000541578 TRAK1Q9UPV9 953 aa7□□□□□ -1.29
SNHG1-217ENST00000541578 MEGF11A6BM72 1044 aa6.99□□□□□ -1.29
SNHG1-217ENST00000541578 SART1O43290 800 aaKnown RBP6.99□□□□□ -1.29
SNHG1-217ENST00000541578 ANKRD34AQ69YU3 496 aa6.99□□□□□ -1.29
SNHG1-217ENST00000541578 DDX54Q8TDD1 881 aaKnown RBP6.99□□□□□ -1.29
SNHG1-217ENST00000541578 NLRP2Q9NX02 1062 aa6.99□□□□□ -1.29
SNHG1-217ENST00000541578 PPP4R2Q9NY27 417 aa6.99□□□□□ -1.29
SNHG1-217ENST00000541578 LOC100289279A0A1B0GTE1 492 aa6.98□□□□□ -1.29
SNHG1-217ENST00000541578 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
SNHG1-217ENST00000541578 DHX15O43143 795 aaKnown RBP6.98□□□□□ -1.29
SNHG1-217ENST00000541578 ITPKAP23677 461 aa6.98□□□□□ -1.29
SNHG1-217ENST00000541578 MFAP1P55081 439 aaKnown RBP6.98□□□□□ -1.29
SNHG1-217ENST00000541578 PTPN12Q05209 780 aaKnown RBP6.98□□□□□ -1.29
SNHG1-217ENST00000541578 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
SNHG1-217ENST00000541578 FDX2Q6P4F2 183 aa6.98□□□□□ -1.29
SNHG1-217ENST00000541578 FAM46AQ96IP4 442 aaKnown RBP6.98□□□□□ -1.29
SNHG1-217ENST00000541578 GRM2Q14416 872 aa6.97□□□□□ -1.29
SNHG1-217ENST00000541578 ENOX2Q16206 610 aaKnown RBP6.97□□□□□ -1.29
SNHG1-217ENST00000541578 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
SNHG1-217ENST00000541578 NUTM2GQ5VZR2 741 aa6.97□□□□□ -1.29
SNHG1-217ENST00000541578 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
SNHG1-217ENST00000541578 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
SNHG1-217ENST00000541578 ZNF576Q9H609 170 aa6.97□□□□□ -1.29
SNHG1-217ENST00000541578 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
SNHG1-217ENST00000541578 STOML1Q9UBI4 398 aa6.97□□□□□ -1.29
SNHG1-217ENST00000541578 RAXQ9Y2V3 346 aa6.97□□□□□ -1.29
SNHG1-217ENST00000541578 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 B3GALT4O96024 378 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 CYP11A1P05108 521 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 RPS26P11Q5JNZ5 115 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-217ENST00000541578 EXOSC6Q5RKV6 272 aaKnown RBP6.96□□□□□ -1.3
SNHG1-217ENST00000541578 SLC51AQ86UW1 340 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 ARMC10Q8N2F6 343 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 ASB16Q96NS5 453 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms