RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 HSCBQ8IWL3 235 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 SLC16A10Q8TF71 515 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 IL17RAQ96F46 866 aa10.41□□□□□ -0.74
THBS3-210ENST00000541576 SLC9C2Q5TAH2 1124 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 RBM8AQ9Y5S9 174 aaKnown RBP10.4□□□□□ -0.74
THBS3-210ENST00000541576 MAST3O60307 1309 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 SEMA3EO15041 775 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 HSP90AA1P07900 732 aaKnown RBP10.4□□□□□ -0.74
THBS3-210ENST00000541576 MAP3K12Q12852 859 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 NECTIN1Q15223 517 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 PRPF40BQ6NWY9 871 aaKnown RBP10.4□□□□□ -0.74
THBS3-210ENST00000541576 C2CD5Q86YS7 1000 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 APPBP2Q92624 585 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 OSBP2Q969R2 916 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 DENND2AQ9ULE3 1009 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 SNX14Q9Y5W7 946 aa10.4□□□□□ -0.74
THBS3-210ENST00000541576 COL11A2P13942 1736 aaPredicted RBP10.39□□□□□ -0.75
THBS3-210ENST00000541576 UFL1O94874 794 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 ATP2B4P23634 1241 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 ADD2P35612 726 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 TXNRD3Q86VQ6 643 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 GGA1Q9UJY5 639 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 IRS2Q9Y4H2 1338 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 MYO5AQ9Y4I1 1855 aaKnown RBP10.39□□□□□ -0.75
THBS3-210ENST00000541576 H0YIN7 160 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 M0R2C6 588 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 PDE6AP16499 860 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 UBE3CQ15386 1083 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 ZNF622Q969S3 477 aaKnown RBP eCLIP10.39□□□□□ -0.757e-6■■■■□ 22.7
THBS3-210ENST00000541576 PODXL2Q9NZ53 605 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 ATP6V0A2Q9Y487 856 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 NEK4P51957 841 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 KCNB2Q92953 911 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 WWC3Q9ULE0 1092 aa10.39□□□□□ -0.75
THBS3-210ENST00000541576 COL1A1P02452 1464 aaPredicted RBP10.38□□□□□ -0.75
THBS3-210ENST00000541576 ZNF532Q9HCE3 1301 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 ST18O60284 1047 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 ZKSCAN1P17029 563 aaPredicted RBP10.38□□□□□ -0.75
THBS3-210ENST00000541576 C15orf52Q6ZUT6 534 aaKnown RBP10.38□□□□□ -0.75
THBS3-210ENST00000541576 UPF3BQ9BZI7 483 aaKnown RBP10.38□□□□□ -0.75
THBS3-210ENST00000541576 LRP2BPQ9P2M1 347 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 LRRC37AA6NMS7 1700 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 CREB3L3Q68CJ9 461 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 STYK1Q6J9G0 422 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 ZNF804AQ7Z570 1209 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 PUS7LQ9H0K6 701 aaKnown RBP10.38□□□□□ -0.75
THBS3-210ENST00000541576 TMX4Q9H1E5 349 aaPredicted RBP10.38□□□□□ -0.75
THBS3-210ENST00000541576 ABCF2Q9UG63 623 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 TAF6LQ9Y6J9 622 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
THBS3-210ENST00000541576 DOCK2Q92608 1830 aa10.38□□□□□ -0.75
THBS3-210ENST00000541576 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
THBS3-210ENST00000541576 VPS53Q5VIR6 699 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 MAGEB6Q8N7X4 407 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 GPR101Q96P66 508 aaPredicted RBP10.37□□□□□ -0.75
THBS3-210ENST00000541576 DSCC1Q9BVC3 393 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 TCRBV5S4A2TA0A5A2 114 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 K7ELQ4 463 aaPredicted RBP10.37□□□□□ -0.75
THBS3-210ENST00000541576 ADCK5Q3MIX3 580 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 MYH13Q9UKX3 1938 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 SLC27A2O14975 620 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 ZBTB22O15209 634 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 GPAA1O43292 621 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 HSPD1P10809 573 aaKnown RBP10.37□□□□□ -0.75
THBS3-210ENST00000541576 CHRNA5P30532 468 aa10.37□□□□□ -0.75
THBS3-210ENST00000541576 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
THBS3-210ENST00000541576 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
THBS3-210ENST00000541576 MPNDQ8N594 471 aa10.36□□□□□ -0.75
THBS3-210ENST00000541576 UPF1Q92900 1129 aaKnown RBP eCLIP10.36□□□□□ -0.75
THBS3-210ENST00000541576 RAI14Q9P0K7 980 aa10.36□□□□□ -0.75
THBS3-210ENST00000541576 CPA1P15085 419 aa10.36□□□□□ -0.75
THBS3-210ENST00000541576 CNKSR1Q969H4 720 aa10.36□□□□□ -0.75
THBS3-210ENST00000541576 C10orf71Q711Q0 1435 aa10.36□□□□□ -0.75
THBS3-210ENST00000541576 OLFM4Q6UX06 510 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 TDRD7Q8NHU6 1098 aaKnown RBP10.35□□□□□ -0.75
THBS3-210ENST00000541576 AIDAQ96BJ3 306 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 LTBP1Q14766 1721 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 FOXP2O15409 715 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 ZBTB7AO95365 584 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 DPP8Q6V1X1 898 aaPredicted RBP10.35□□□□□ -0.75
THBS3-210ENST00000541576 JAKMIP1Q96N16 626 aaKnown RBP10.35□□□□□ -0.75
THBS3-210ENST00000541576 CACNA1SQ13698 1873 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 CASTP20810 708 aaKnown RBP10.35□□□□□ -0.75
THBS3-210ENST00000541576 TM6SF1Q9BZW5 370 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 CD209Q9NNX6 404 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
THBS3-210ENST00000541576 A0A0G2JLW4 131 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 A0A0U1RQG5 324 aaPredicted RBP10.34□□□□□ -0.75
THBS3-210ENST00000541576 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 JAG2Q9Y219 1238 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 GOLGA6L3A6NEY3 463 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 CYP21A2P08686 494 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 CYP7A1P22680 504 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 PSMA5P28066 241 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms