RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 ISM2Q6H9L7 571 aa17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 MNS1Q8NEH6 495 aa17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 LINS1Q8NG48 757 aa17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 NEK1Q96PY6 1258 aa17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 ALDH8A1Q9H2A2 487 aaPredicted RBP17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.26■□□□□ 0.35
AC005840.4-201ENST00000541242 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 TRIM66O15016 1216 aa17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 ETF1P62495 437 aaKnown RBP17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 ARGLU1Q9NWB6 273 aaPredicted RBP17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 IMPACTQ9P2X3 320 aa17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 GRM8O00222 908 aa17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 TAF5LO75529 589 aa17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 TPM4P67936 248 aa17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 CCT2P78371 535 aaKnown RBP17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
AC005840.4-201ENST00000541242 XIRP1Q702N8 1843 aaKnown RBP17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 TRIM65Q6PJ69 517 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 BRINP3Q76B58 766 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 XAGE3Q8WTP9 111 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 NAT10Q9H0A0 1025 aaKnown RBP17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 HIP1O00291 1037 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 TADA3O75528 432 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 C10orf67Q8IYJ2 551 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 NCOA5Q9HCD5 579 aaKnown RBP17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 LAMA4Q16363 1823 aa17.24■□□□□ 0.35
AC005840.4-201ENST00000541242 CTDNEP1O95476 244 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 DDX58O95786 925 aaKnown RBP17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 NDUFA8P51970 172 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 COPS6Q7L5N1 327 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 ILDR1Q86SU0 546 aaPredicted RBP17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 PCDHA7Q9UN72 937 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 EVCP57679 992 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 FMR1NBQ8N0W7 255 aaPredicted RBP17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 NSUN7Q8NE18 718 aaKnown RBP17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 UTYO14607 1347 aa17.23■□□□□ 0.35
AC005840.4-201ENST00000541242 APOBRQ0VD83 1088 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 LRP10Q7Z4F1 713 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 RSPH14Q9UHP6 348 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 CCDC191Q8NCU4 936 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 HMG20BQ9P0W2 317 aa17.22■□□□□ 0.35
AC005840.4-201ENST00000541242 CYP21A2P08686 494 aa17.21■□□□□ 0.35
AC005840.4-201ENST00000541242 ZSCAN26Q16670 478 aa17.21■□□□□ 0.35
AC005840.4-201ENST00000541242 ERC1Q8IUD2 1116 aa17.21■□□□□ 0.35
AC005840.4-201ENST00000541242 UBXN6Q9BZV1 441 aa17.21■□□□□ 0.35
AC005840.4-201ENST00000541242 TSPYL1Q9H0U9 437 aa17.21■□□□□ 0.35
AC005840.4-201ENST00000541242 PARP3Q9Y6F1 533 aa17.21■□□□□ 0.35
AC005840.4-201ENST00000541242 CPDO75976 1380 aa17.21■□□□□ 0.35
AC005840.4-201ENST00000541242 PHLPP2Q6ZVD8 1323 aa17.21■□□□□ 0.34
AC005840.4-201ENST00000541242 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.34
AC005840.4-201ENST00000541242 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.34
AC005840.4-201ENST00000541242 CC2D1AQ6P1N0 951 aaPredicted RBP17.21■□□□□ 0.34
AC005840.4-201ENST00000541242 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.34
AC005840.4-201ENST00000541242 DPF2Q92785 391 aa17.21■□□□□ 0.34
AC005840.4-201ENST00000541242 KIAA1468Q9P260 1216 aa17.21■□□□□ 0.34
AC005840.4-201ENST00000541242 NEURL1BA8MQ27 555 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 TNNT3P45378 269 aaPredicted RBP17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 G3BP1Q13283 466 aaKnown RBP eCLIP17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 ZRSR1Q15695 479 aaKnown RBP17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 PAXIP1Q6ZW49 1069 aaPredicted RBP17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 REXO1L1PQ8IX06 675 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 MYD88Q99836 296 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 NCAPHQ15003 741 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 EPHA10Q5JZY3 1008 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
AC005840.4-201ENST00000541242 ABCC6O95255 1503 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 MRC1P22897 1456 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 NEDD4P46934 1319 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 MYO1CO00159 1063 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 MUM1L1Q5H9M0 696 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 JCADQ9P266 1359 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 EFCAB8A8MWE9 144 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 CABP4P57796 275 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 FANCCQ00597 558 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 USPL1Q5W0Q7 1092 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 NAA16Q6N069 864 aaPredicted RBP17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 CHST3Q7LGC8 479 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 ZNF396Q96N95 335 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms