RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-204ENST00000541225 LIMCH1Q9UPQ0 1083 aa5.67□□□□□ -1.5
ABCA8-204ENST00000541225 CDHR2Q9BYE9 1310 aa5.67□□□□□ -1.5
ABCA8-204ENST00000541225 SLIT2O94813 1529 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ARFGEF1Q9Y6D6 1849 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ANKRD18BA2A2Z9 1011 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 PPP1R12AO14974 1030 aaPredicted RBP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 RAB11FIP3O75154 756 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 IVLP07476 585 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 CCDC192P0DO97 292 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 LIG1P18858 919 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 EXOSC10Q01780 885 aaKnown RBP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 CREB5Q02930 508 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 DRP2Q13474 957 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 KIAA0753Q2KHM9 967 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 C16orf71Q8IYS4 520 aaPredicted RBP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 LEO1Q8WVC0 666 aaPredicted RBP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 MMTAG2Q9BU76 263 aaKnown RBP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 EBF2Q9HAK2 575 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 EMILIN1Q9Y6C2 1016 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 SPDYE4A6NLX3 237 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 MGRN1O60291 552 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 LCA5LO95447 670 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 TNNT1P13805 278 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 MCCP23508 829 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 TNNT2P45379 298 aaPredicted RBP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ZNF568Q3ZCX4 644 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 UNC5CLQ8IV45 518 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 MED15Q96RN5 788 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 SLC12A5Q9H2X9 1139 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ABCC12Q96J65 1359 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ZNFX1Q9P2E3 1918 aaKnown RBP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 CTDNEP1O95476 244 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 APOBRQ0VD83 1088 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ELF2Q15723 593 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 SYNE3Q6ZMZ3 975 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ARHGEF25Q86VW2 580 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
ABCA8-204ENST00000541225 MNS1Q8NEH6 495 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 GOLPH3LQ9H4A5 285 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 JRKLQ9Y4A0 524 aa5.66□□□□□ -1.5
ABCA8-204ENST00000541225 FNDC1Q4ZHG4 1894 aaPredicted RBP5.65□□□□□ -1.5
ABCA8-204ENST00000541225 A0A1B0GUL7 405 aa5.65□□□□□ -1.5
ABCA8-204ENST00000541225 BIN1O00499 593 aa5.65□□□□□ -1.5
ABCA8-204ENST00000541225 PPFIA4O75335 1185 aa5.65□□□□□ -1.5
ABCA8-204ENST00000541225 AK2P54819 239 aa5.65□□□□□ -1.5
ABCA8-204ENST00000541225 SIP14410 1827 aa5.65□□□□□ -1.5
ABCA8-204ENST00000541225 XIRP1Q702N8 1843 aaKnown RBP5.65□□□□□ -1.5
ABCA8-204ENST00000541225 C10orf71Q711Q0 1435 aa5.65□□□□□ -1.51
ABCA8-204ENST00000541225 RIPK1Q13546 671 aa5.65□□□□□ -1.51
ABCA8-204ENST00000541225 BYSLQ13895 437 aaKnown RBP5.65□□□□□ -1.51
ABCA8-204ENST00000541225 ZSCAN26Q16670 478 aa5.65□□□□□ -1.51
ABCA8-204ENST00000541225 C11orf57Q6ZUT1 292 aaPredicted RBP5.65□□□□□ -1.51
ABCA8-204ENST00000541225 NCSTNQ92542 709 aa5.65□□□□□ -1.51
ABCA8-204ENST00000541225 ITFG2Q969R8 447 aa5.65□□□□□ -1.51
ABCA8-204ENST00000541225 AZIN2Q96A70 460 aa5.65□□□□□ -1.51
ABCA8-204ENST00000541225 ZMYM6O95789 1325 aa5.65□□□□□ -1.51
ABCA8-204ENST00000541225 A0A087WUV0 522 aaPredicted RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 GOLGA6L6A8MZA4 724 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 EIF3CLB5ME19 914 aaKnown RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 COL9A3Q14050 684 aaPredicted RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 ZC3H12AQ5D1E8 599 aaKnown RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 RASGRP2Q7LDG7 609 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 VSTM4Q8IW00 320 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 AENQ8WTP8 325 aaKnown RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 EIF3CQ99613 913 aaKnown RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 CXorf56Q9H5V9 222 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 DNAJC5BQ9UF47 199 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 A6NHS1 94 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 NEFHP12036 1026 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 ERCC3P19447 782 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 TXLNAP40222 546 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 EFCAB2Q5VUJ9 269 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 FAM71BQ8TC56 605 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 PPM1EQ8WY54 764 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 RTEL1Q9NZ71 1219 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 MYO1AQ9UBC5 1043 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 LOC285556D6RIA3 1793 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 LTBP1Q14766 1721 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 ARHGAP25P42331 645 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 SLC8A3P57103 927 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 ME3Q16798 604 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 CCDC186Q7Z3E2 898 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 SH3RF1Q7Z6J0 888 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 CCDC112Q8NEF3 446 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 ZFAND2BQ8WV99 257 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 SEC14L1Q92503 715 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 RTF1Q92541 710 aaKnown RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 MIEF2Q96C03 454 aa5.64□□□□□ -1.51
ABCA8-204ENST00000541225 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 U3KPZ7 1027 aaPredicted RBP5.64□□□□□ -1.51
ABCA8-204ENST00000541225 TRIM66O15016 1216 aa5.63□□□□□ -1.51
ABCA8-204ENST00000541225 SEMA3EO15041 775 aa5.63□□□□□ -1.51
ABCA8-204ENST00000541225 IFIT2P09913 472 aaKnown RBP5.63□□□□□ -1.51
ABCA8-204ENST00000541225 CCT4P50991 539 aaKnown RBP5.63□□□□□ -1.51
ABCA8-204ENST00000541225 PAPD7Q5XG87 772 aaKnown RBP5.63□□□□□ -1.51
ABCA8-204ENST00000541225 FOXR2Q6PJQ5 311 aa5.63□□□□□ -1.51
ABCA8-204ENST00000541225 NBPF15Q8N660 670 aa5.63□□□□□ -1.51
ABCA8-204ENST00000541225 FAM210AQ96ND0 272 aa5.63□□□□□ -1.51
ABCA8-204ENST00000541225 PANX2Q96RD6 677 aa5.63□□□□□ -1.51
ABCA8-204ENST00000541225 SCAND2PQ9GZW5 306 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms