RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SLC10A4Q96EP9 437 aa34.22■■■■□ 3.07
CHFR-218ENST00000540963 ANKRD18BA2A2Z9 1011 aa34.21■■■■□ 3.07
CHFR-218ENST00000540963 NCBP3Q53F19 620 aaKnown RBP34.21■■■■□ 3.07
CHFR-218ENST00000540963 WWC1Q8IX03 1113 aa34.21■■■■□ 3.07
CHFR-218ENST00000540963 A0A1B0GUL6 1792 aa34.21■■■■□ 3.07
CHFR-218ENST00000540963 R3HDMLQ9H3Y0 253 aa34.2■■■■□ 3.07
CHFR-218ENST00000540963 MYO1BO43795 1136 aa34.19■■■■□ 3.06
CHFR-218ENST00000540963 IFNL1Q8IU54 200 aa34.19■■■■□ 3.06
CHFR-218ENST00000540963 IL1R1P14778 569 aa34.18■■■■□ 3.06
CHFR-218ENST00000540963 FKBP5Q13451 457 aaPredicted RBP34.18■■■■□ 3.06
CHFR-218ENST00000540963 SUPT20HL1Q3ZLR7 823 aa34.18■■■■□ 3.06
CHFR-218ENST00000540963 CERS5Q8N5B7 392 aa34.18■■■■□ 3.06
CHFR-218ENST00000540963 ZNF804AQ7Z570 1209 aa34.17■■■■□ 3.06
CHFR-218ENST00000540963 SSC5DA1L4H1 1573 aa34.16■■■■□ 3.06
CHFR-218ENST00000540963 IFIT5Q13325 482 aaKnown RBP34.16■■■■□ 3.06
CHFR-218ENST00000540963 WNK4Q96J92 1243 aa34.16■■■■□ 3.06
CHFR-218ENST00000540963 SPDYE2BA6NHP3 402 aa34.15■■■■□ 3.06
CHFR-218ENST00000540963 SPDYE6P0CI01 402 aa34.15■■■■□ 3.06
CHFR-218ENST00000540963 INTS3Q68E01 1043 aaKnown RBP34.15■■■■□ 3.06
CHFR-218ENST00000540963 CFAP100Q494V2 611 aa34.13■■■■□ 3.05
CHFR-218ENST00000540963 FZD1Q9UP38 647 aa34.13■■■■□ 3.05
CHFR-218ENST00000540963 TAF5LO75529 589 aa34.12■■■■□ 3.05
CHFR-218ENST00000540963 FOXO4P98177 505 aa34.12■■■■□ 3.05
CHFR-218ENST00000540963 OTUD7BQ6GQQ9 843 aa34.12■■■■□ 3.05
CHFR-218ENST00000540963 HTTP42858 3142 aa34.11■■■■□ 3.05
CHFR-218ENST00000540963 IREB2P48200 963 aaKnown RBP34.11■■■■□ 3.05
CHFR-218ENST00000540963 OTOP1Q7RTM1 612 aa34.11■■■■□ 3.05
CHFR-218ENST00000540963 GCC1Q96CN9 775 aa34.11■■■■□ 3.05
CHFR-218ENST00000540963 CLMNQ96JQ2 1002 aa34.11■■■■□ 3.05
CHFR-218ENST00000540963 TRIM17Q9Y577 477 aa34.11■■■■□ 3.05
CHFR-218ENST00000540963 SNAP23O00161 211 aa34.1■■■■□ 3.05
CHFR-218ENST00000540963 IGF2BP3O00425 579 aaKnown RBP eCLIP34.1■■■■□ 3.05
CHFR-218ENST00000540963 ERO1AQ96HE7 468 aa34.1■■■■□ 3.05
CHFR-218ENST00000540963 PRMT6Q96LA8 375 aaPredicted RBP34.1■■■■□ 3.05
CHFR-218ENST00000540963 RBBP6Q7Z6E9 1792 aaKnown RBP34.1■■■■□ 3.05
CHFR-218ENST00000540963 HELBQ8NG08 1087 aaPredicted RBP34.09■■■■□ 3.05
CHFR-218ENST00000540963 ANKRD13AQ8IZ07 590 aa34.08■■■■□ 3.05
CHFR-218ENST00000540963 CLRN2A0PK11 232 aa34.07■■■■□ 3.04
CHFR-218ENST00000540963 F8W031 263 aaPredicted RBP34.07■■■■□ 3.04
CHFR-218ENST00000540963 PCDHAC2Q9Y5I4 1007 aa34.07■■■■□ 3.04
CHFR-218ENST00000540963 FANCIQ9NVI1 1328 aa34.06■■■■□ 3.04
CHFR-218ENST00000540963 TESPA1A2RU30 521 aaPredicted RBP34.06■■■■□ 3.04
CHFR-218ENST00000540963 VAMP4O75379 141 aa34.06■■■■□ 3.04
CHFR-218ENST00000540963 USP2O75604 605 aaPredicted RBP34.06■■■■□ 3.04
CHFR-218ENST00000540963 TNFAIP1Q13829 316 aa34.06■■■■□ 3.04
CHFR-218ENST00000540963 NBPF12Q5TAG4 269 aaPredicted RBP34.06■■■■□ 3.04
CHFR-218ENST00000540963 VEZTQ9HBM0 779 aa34.06■■■■□ 3.04
CHFR-218ENST00000540963 FAM205AQ6ZU69 1335 aa34.05■■■■□ 3.04
CHFR-218ENST00000540963 RASA3Q14644 834 aa34.05■■■■□ 3.04
CHFR-218ENST00000540963 BEND3Q5T5X7 828 aa34.05■■■■□ 3.04
CHFR-218ENST00000540963 CHMP3Q9Y3E7 222 aa34.05■■■■□ 3.04
CHFR-218ENST00000540963 CCDC57Q2TAC2 916 aa34.04■■■■□ 3.04
CHFR-218ENST00000540963 LMBR1LQ6UX01 489 aa34.03■■■■□ 3.04
CHFR-218ENST00000540963 LDHAL6AQ6ZMR3 332 aa34.03■■■■□ 3.04
CHFR-218ENST00000540963 PTPN22Q9Y2R2 807 aa34.03■■■■□ 3.04
CHFR-218ENST00000540963 RBM5P52756 815 aaKnown RBP eCLIP34.02■■■■□ 3.04
CHFR-218ENST00000540963 CRHR2Q13324 411 aa34.02■■■■□ 3.04
CHFR-218ENST00000540963 WDR63Q8IWG1 891 aa34.02■■■■□ 3.04
CHFR-218ENST00000540963 SERPINA10Q9UK55 444 aa34.02■■■■□ 3.04
CHFR-218ENST00000540963 OTOFQ9HC10 1997 aa34.02■■■■□ 3.04
CHFR-218ENST00000540963 GJA5P36382 358 aa34.01■■■■□ 3.03
CHFR-218ENST00000540963 SPDYE2Q495Y8 402 aa34■■■■□ 3.03
CHFR-218ENST00000540963 TAF7LQ5H9L4 462 aa34■■■■□ 3.03
CHFR-218ENST00000540963 TDRD7Q8NHU6 1098 aaKnown RBP34■■■■□ 3.03
CHFR-218ENST00000540963 ARAP2Q8WZ64 1704 aa34■■■■□ 3.03
CHFR-218ENST00000540963 CNNM1Q9NRU3 951 aa34■■■■□ 3.03
CHFR-218ENST00000540963 ZBTB4Q9P1Z0 1013 aaPredicted RBP34■■■■□ 3.03
CHFR-218ENST00000540963 MKI67P46013 3256 aaKnown RBP34■■■■□ 3.03
CHFR-218ENST00000540963 CENPFP49454 3210 aa34■■■■□ 3.03
CHFR-218ENST00000540963 GRM8O00222 908 aa33.99■■■■□ 3.03
CHFR-218ENST00000540963 SP3Q02447 781 aa33.99■■■■□ 3.03
CHFR-218ENST00000540963 UBE4AQ14139 1066 aa33.99■■■■□ 3.03
CHFR-218ENST00000540963 CCDC184Q52MB2 194 aa33.99■■■■□ 3.03
CHFR-218ENST00000540963 ARMC5Q96C12 935 aa33.99■■■■□ 3.03
CHFR-218ENST00000540963 AOX1Q06278 1338 aa33.99■■■■□ 3.03
CHFR-218ENST00000540963 KIAA0100Q14667 2235 aaKnown RBP33.99■■■■□ 3.03
CHFR-218ENST00000540963 MFSD14BQ5SR56 506 aa33.98■■■■□ 3.03
CHFR-218ENST00000540963 CD99L2Q8TCZ2 262 aa33.98■■■■□ 3.03
CHFR-218ENST00000540963 PTPN18Q99952 460 aa33.98■■■■□ 3.03
CHFR-218ENST00000540963 EFCC1Q9HA90 598 aa33.98■■■■□ 3.03
CHFR-218ENST00000540963 POTEFA5A3E0 1075 aa33.97■■■■□ 3.03
CHFR-218ENST00000540963 F6X3S4 739 aa33.97■■■■□ 3.03
CHFR-218ENST00000540963 EPHA10Q5JZY3 1008 aa33.97■■■■□ 3.03
CHFR-218ENST00000540963 ZNF70Q9UC06 446 aaPredicted RBP33.97■■■■□ 3.03
CHFR-218ENST00000540963 OPTNQ96CV9 577 aa33.96■■■■□ 3.03
CHFR-218ENST00000540963 ZNF594Q96JF6 807 aaPredicted RBP33.96■■■■□ 3.03
CHFR-218ENST00000540963 TTF2Q9UNY4 1162 aaKnown RBP33.96■■■■□ 3.03
CHFR-218ENST00000540963 JAG2Q9Y219 1238 aa33.96■■■■□ 3.03
CHFR-218ENST00000540963 PLIN1O60240 522 aa33.95■■■■□ 3.03
CHFR-218ENST00000540963 HIBADHP31937 336 aaKnown RBP33.95■■■■□ 3.03
CHFR-218ENST00000540963 ARHGEF6Q15052 776 aa33.95■■■■□ 3.03
CHFR-218ENST00000540963 MS4A4AQ96JQ5 239 aa33.95■■■■□ 3.03
CHFR-218ENST00000540963 EXOSC9Q06265 439 aaKnown RBP33.94■■■■□ 3.02
CHFR-218ENST00000540963 ALDH1L1O75891 902 aa33.93■■■■□ 3.02
CHFR-218ENST00000540963 DZIP1LQ8IYY4 767 aaKnown RBP33.93■■■■□ 3.02
CHFR-218ENST00000540963 TEPSINQ96N21 525 aa33.93■■■■□ 3.02
CHFR-218ENST00000540963 ELP3Q9H9T3 547 aa33.93■■■■□ 3.02
CHFR-218ENST00000540963 C9orf78Q9NZ63 289 aaPredicted RBP33.93■■■■□ 3.02
CHFR-218ENST00000540963 TNNI2P48788 182 aa33.92■■■■□ 3.02
CHFR-218ENST00000540963 FAM84BQ96KN1 310 aaPredicted RBP33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms