RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KIF4BQ2VIQ3 1234 aa11.45□□□□□ -0.58
SNHG1-215ENST00000540904 FBXO33Q7Z6M2 555 aa11.45□□□□□ -0.58
SNHG1-215ENST00000540904 OGFOD1Q8N543 542 aa11.45□□□□□ -0.58
SNHG1-215ENST00000540904 LPIN2Q92539 896 aa11.45□□□□□ -0.58
SNHG1-215ENST00000540904 DDX19BQ9UMR2 479 aa11.45□□□□□ -0.58
SNHG1-215ENST00000540904 IQSEC3Q9UPP2 1182 aaPredicted RBP11.45□□□□□ -0.58
SNHG1-215ENST00000540904 ITGBL1O95965 494 aaPredicted RBP11.44□□□□□ -0.58
SNHG1-215ENST00000540904 HTRA3P83110 453 aa11.44□□□□□ -0.58
SNHG1-215ENST00000540904 TFCP2Q12800 502 aa11.44□□□□□ -0.58
SNHG1-215ENST00000540904 G3BP1Q13283 466 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNHG1-215ENST00000540904 PDE3AQ14432 1141 aa11.44□□□□□ -0.58
SNHG1-215ENST00000540904 KIAA0825Q8IV33 1275 aa11.44□□□□□ -0.58
SNHG1-215ENST00000540904 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
SNHG1-215ENST00000540904 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
SNHG1-215ENST00000540904 ZNF609O15014 1411 aa11.43□□□□□ -0.58
SNHG1-215ENST00000540904 F8W031 263 aaPredicted RBP11.43□□□□□ -0.58
SNHG1-215ENST00000540904 CHAF1AQ13111 956 aaPredicted RBP11.43□□□□□ -0.58
SNHG1-215ENST00000540904 OS9Q13438 667 aaPredicted RBP11.43□□□□□ -0.58
SNHG1-215ENST00000540904 CEP85Q6P2H3 762 aa11.43□□□□□ -0.58
SNHG1-215ENST00000540904 CERS5Q8N5B7 392 aa11.43□□□□□ -0.58
SNHG1-215ENST00000540904 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
SNHG1-215ENST00000540904 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
SNHG1-215ENST00000540904 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
SNHG1-215ENST00000540904 HDAC9Q9UKV0 1011 aa11.43□□□□□ -0.58
SNHG1-215ENST00000540904 A0A1B0GUL6 1792 aa11.43□□□□□ -0.58
SNHG1-215ENST00000540904 FAM205AQ6ZU69 1335 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 PASKQ96RG2 1323 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 TRAF5O00463 557 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 SURF6O75683 361 aaKnown RBP11.42□□□□□ -0.58
SNHG1-215ENST00000540904 TIMM10P62072 90 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 MFSD14BQ5SR56 506 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 GLIS2Q9BZE0 524 aaPredicted RBP11.42□□□□□ -0.58
SNHG1-215ENST00000540904 ZBTB40Q9NUA8 1239 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 GGA3Q9NZ52 723 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 PGAP2Q9UHJ9 254 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 AKAP2Q9Y2D5 859 aa11.42□□□□□ -0.58
SNHG1-215ENST00000540904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.42□□□□□ -0.58
SNHG1-215ENST00000540904 ASTN2O75129 1339 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-215ENST00000540904 A0A1B0GUL7 405 aa11.41□□□□□ -0.58
SNHG1-215ENST00000540904 ADORA1P30542 326 aa11.41□□□□□ -0.58
SNHG1-215ENST00000540904 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
SNHG1-215ENST00000540904 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
SNHG1-215ENST00000540904 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNHG1-215ENST00000540904 SCARF1Q14162 830 aa11.41□□□□□ -0.58
SNHG1-215ENST00000540904 CDC37L1Q7L3B6 337 aa11.41□□□□□ -0.58
SNHG1-215ENST00000540904 KRT26Q7Z3Y9 468 aa11.41□□□□□ -0.58
SNHG1-215ENST00000540904 DCPSQ96C86 337 aaKnown RBP11.41□□□□□ -0.58
SNHG1-215ENST00000540904 NEUROD6Q96NK8 337 aa11.41□□□□□ -0.58
SNHG1-215ENST00000540904 PHKA1P46020 1223 aa11.4□□□□□ -0.58
SNHG1-215ENST00000540904 NBPF9Q3BBW0 867 aa11.4□□□□□ -0.58
SNHG1-215ENST00000540904 ANGEL2Q5VTE6 544 aaKnown RBP11.4□□□□□ -0.58
SNHG1-215ENST00000540904 USP48Q86UV5 1035 aa11.4□□□□□ -0.58
SNHG1-215ENST00000540904 XAGE2Q96GT9 111 aa11.4□□□□□ -0.58
SNHG1-215ENST00000540904 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
SNHG1-215ENST00000540904 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
SNHG1-215ENST00000540904 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
SNHG1-215ENST00000540904 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 ADM5C9JUS6 153 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 WNT10BO00744 389 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 MMP14P50281 582 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 RBM5P52756 815 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNHG1-215ENST00000540904 DLGAP5Q15398 846 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 GORABQ5T7V8 394 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 CCDC102BQ68D86 513 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 SULF1Q8IWU6 871 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 RPAP2Q8IXW5 612 aaPredicted RBP11.39□□□□□ -0.59
SNHG1-215ENST00000540904 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 ZNF408Q9H9D4 720 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 TTF2Q9UNY4 1162 aaKnown RBP11.39□□□□□ -0.59
SNHG1-215ENST00000540904 EXOC6BQ9Y2D4 811 aa11.39□□□□□ -0.59
SNHG1-215ENST00000540904 PSME4Q14997 1843 aa11.38□□□□□ -0.59
SNHG1-215ENST00000540904 HMMRO75330 724 aa11.38□□□□□ -0.59
SNHG1-215ENST00000540904 CELF2O95319 508 aaKnown RBP11.38□□□□□ -0.59
SNHG1-215ENST00000540904 GRIK5Q16478 980 aa11.38□□□□□ -0.59
SNHG1-215ENST00000540904 CFAP100Q494V2 611 aa11.38□□□□□ -0.59
SNHG1-215ENST00000540904 SIRT2Q8IXJ6 389 aa11.38□□□□□ -0.59
SNHG1-215ENST00000540904 SCAF8Q9UPN6 1271 aaKnown RBP11.38□□□□□ -0.59
SNHG1-215ENST00000540904 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
SNHG1-215ENST00000540904 APBB1O00213 710 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 CST9Q5W186 159 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 DNAJC5GQ8N7S2 189 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 WDR66Q8TBY9 1149 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 SERPINA10Q9UK55 444 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 DENND2AQ9ULE3 1009 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
SNHG1-215ENST00000540904 FPGT-TNNI3KV9GXZ4 949 aa11.37□□□□□ -0.59
SNHG1-215ENST00000540904 COL1A1P02452 1464 aaPredicted RBP11.37□□□□□ -0.59
SNHG1-215ENST00000540904 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 SEMA3EO15041 775 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 MYO1BO43795 1136 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 ERC1Q8IUD2 1116 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 MTMR14Q8NCE2 650 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms