RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ATP2B3Q16720 1220 aa20.99■□□□□ 0.95
CD9-209ENST00000540891 CAVIN4Q5BKX8 364 aa20.99■□□□□ 0.95
CD9-209ENST00000540891 KIAA0825Q8IV33 1275 aa20.99■□□□□ 0.95
CD9-209ENST00000540891 SSH3Q8TE77 659 aa20.99■□□□□ 0.95
CD9-209ENST00000540891 SLC5A1P13866 664 aa20.98■□□□□ 0.95
CD9-209ENST00000540891 CREBZFQ9NS37 354 aa20.98■□□□□ 0.95
CD9-209ENST00000540891 IQSEC3Q9UPP2 1182 aaPredicted RBP20.98■□□□□ 0.95
CD9-209ENST00000540891 TFCP2Q12800 502 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 SCARF1Q14162 830 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 CEP85Q6P2H3 762 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 DLK2Q6UY11 383 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 CDC37L1Q7L3B6 337 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 VPS37DQ86XT2 251 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 OGFOD1Q8N543 542 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 GGA3Q9NZ52 723 aa20.97■□□□□ 0.95
CD9-209ENST00000540891 TMEM88BA6NKF7 163 aa20.96■□□□□ 0.95
CD9-209ENST00000540891 NBPF9Q3BBW0 867 aa20.96■□□□□ 0.95
CD9-209ENST00000540891 ZBED3Q96IU2 234 aaPredicted RBP20.96■□□□□ 0.95
CD9-209ENST00000540891 DDX19BQ9UMR2 479 aa20.96■□□□□ 0.95
CD9-209ENST00000540891 WNT10BO00744 389 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 ADORA1P30542 326 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 MMP14P50281 582 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 PDE3AQ14432 1141 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 MFSD14BQ5SR56 506 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 CST9Q5W186 159 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 USP48Q86UV5 1035 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 ARAP2Q8WZ64 1704 aa20.95■□□□□ 0.94
CD9-209ENST00000540891 COL1A1P02452 1464 aaPredicted RBP20.94■□□□□ 0.94
CD9-209ENST00000540891 ADM5C9JUS6 153 aa20.94■□□□□ 0.94
CD9-209ENST00000540891 F8W031 263 aaPredicted RBP20.94■□□□□ 0.94
CD9-209ENST00000540891 TIMM10P62072 90 aa20.94■□□□□ 0.94
CD9-209ENST00000540891 GRIK5Q16478 980 aa20.94■□□□□ 0.94
CD9-209ENST00000540891 ANGEL2Q5VTE6 544 aaKnown RBP20.94■□□□□ 0.94
CD9-209ENST00000540891 KLRG1Q96E93 195 aa20.94■□□□□ 0.94
CD9-209ENST00000540891 ZBTB40Q9NUA8 1239 aa20.94■□□□□ 0.94
CD9-209ENST00000540891 HDAC9Q9UKV0 1011 aa20.94■□□□□ 0.94
CD9-209ENST00000540891 A0A1B0GUL7 405 aa20.93■□□□□ 0.94
CD9-209ENST00000540891 CHAF1AQ13111 956 aaPredicted RBP20.93■□□□□ 0.94
CD9-209ENST00000540891 G3BP1Q13283 466 aaKnown RBP eCLIP20.93■□□□□ 0.94
CD9-209ENST00000540891 KRT26Q7Z3Y9 468 aa20.93■□□□□ 0.94
CD9-209ENST00000540891 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.93■□□□□ 0.94
CD9-209ENST00000540891 DCPSQ96C86 337 aaKnown RBP20.93■□□□□ 0.94
CD9-209ENST00000540891 NOP58Q9Y2X3 529 aaKnown RBP20.93■□□□□ 0.94
CD9-209ENST00000540891 PCDHAC2Q9Y5I4 1007 aa20.93■□□□□ 0.94
CD9-209ENST00000540891 POLR2AP24928 1970 aaKnown RBP20.92■□□□□ 0.94
CD9-209ENST00000540891 PHKA1P46020 1223 aa20.92■□□□□ 0.94
CD9-209ENST00000540891 TRPM7Q96QT4 1865 aa20.92■□□□□ 0.94
CD9-209ENST00000540891 FRAT2O75474 233 aaPredicted RBP20.91■□□□□ 0.94
CD9-209ENST00000540891 SURF6O75683 361 aaKnown RBP20.91■□□□□ 0.94
CD9-209ENST00000540891 MTMR14Q8NCE2 650 aa20.91■□□□□ 0.94
CD9-209ENST00000540891 PITPNM2Q9BZ72 1349 aa20.91■□□□□ 0.94
CD9-209ENST00000540891 SCAF8Q9UPN6 1271 aaKnown RBP20.91■□□□□ 0.94
CD9-209ENST00000540891 AKAP2Q9Y2D5 859 aa20.91■□□□□ 0.94
CD9-209ENST00000540891 AOX1Q06278 1338 aa20.9■□□□□ 0.94
CD9-209ENST00000540891 ZBTB22O15209 634 aa20.9■□□□□ 0.94
CD9-209ENST00000540891 CELF2O95319 508 aaKnown RBP20.9■□□□□ 0.94
CD9-209ENST00000540891 CFAP100Q494V2 611 aa20.9■□□□□ 0.94
CD9-209ENST00000540891 CCDC102BQ68D86 513 aa20.9■□□□□ 0.94
CD9-209ENST00000540891 SULF1Q8IWU6 871 aa20.9■□□□□ 0.94
CD9-209ENST00000540891 XAGE2Q96GT9 111 aa20.9■□□□□ 0.94
CD9-209ENST00000540891 TTF2Q9UNY4 1162 aaKnown RBP20.9■□□□□ 0.94
CD9-209ENST00000540891 CNTNAP1P78357 1384 aa20.89■□□□□ 0.93
CD9-209ENST00000540891 DLGAP5Q15398 846 aa20.89■□□□□ 0.93
CD9-209ENST00000540891 SIRT2Q8IXJ6 389 aa20.89■□□□□ 0.93
CD9-209ENST00000540891 TBC1D22AQ8WUA7 517 aa20.89■□□□□ 0.93
CD9-209ENST00000540891 MKRN1Q9UHC7 482 aaKnown RBP20.89■□□□□ 0.93
CD9-209ENST00000540891 PRMT6Q96LA8 375 aaPredicted RBP20.88■□□□□ 0.93
CD9-209ENST00000540891 ZNF408Q9H9D4 720 aa20.88■□□□□ 0.93
CD9-209ENST00000540891 SPDYE2BA6NHP3 402 aa20.87■□□□□ 0.93
CD9-209ENST00000540891 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
CD9-209ENST00000540891 SPDYE6P0CI01 402 aa20.87■□□□□ 0.93
CD9-209ENST00000540891 RRP1P56182 461 aaKnown RBP20.87■□□□□ 0.93
CD9-209ENST00000540891 RPAP2Q8IXW5 612 aaPredicted RBP20.87■□□□□ 0.93
CD9-209ENST00000540891 CDCA5Q96FF9 252 aa20.87■□□□□ 0.93
CD9-209ENST00000540891 GPR108Q9NPR9 543 aa20.87■□□□□ 0.93
CD9-209ENST00000540891 GNL3LQ9NVN8 582 aaKnown RBP20.87■□□□□ 0.93
CD9-209ENST00000540891 SERPINA10Q9UK55 444 aa20.87■□□□□ 0.93
CD9-209ENST00000540891 ABT1Q9ULW3 272 aaKnown RBP20.87■□□□□ 0.93
CD9-209ENST00000540891 TLL2Q9Y6L7 1015 aa20.87■□□□□ 0.93
CD9-209ENST00000540891 MYH13Q9UKX3 1938 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 SEMA3EO15041 775 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 OS9Q13438 667 aaPredicted RBP20.86■□□□□ 0.93
CD9-209ENST00000540891 TNNI3KQ59H18 835 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 JMYQ8N9B5 988 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 WDR66Q8TBY9 1149 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 CHMP4BQ9H444 224 aaKnown RBP20.86■□□□□ 0.93
CD9-209ENST00000540891 EXOC6BQ9Y2D4 811 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 FPGT-TNNI3KV9GXZ4 949 aa20.86■□□□□ 0.93
CD9-209ENST00000540891 CRKP46108 304 aa20.85■□□□□ 0.93
CD9-209ENST00000540891 RASGRF1Q13972 1273 aa20.85■□□□□ 0.93
CD9-209ENST00000540891 DENND2AQ9ULE3 1009 aa20.85■□□□□ 0.93
CD9-209ENST00000540891 SUGT1Q9Y2Z0 365 aa20.85■□□□□ 0.93
CD9-209ENST00000540891 SALL1Q9NSC2 1324 aa20.84■□□□□ 0.93
CD9-209ENST00000540891 DEFB115Q30KQ5 88 aa20.84■□□□□ 0.93
CD9-209ENST00000540891 PRAMEF18Q5VWM3 479 aa20.84■□□□□ 0.93
CD9-209ENST00000540891 SAPCD2Q86UD0 394 aa20.84■□□□□ 0.93
CD9-209ENST00000540891 ECM29Q5VYK3 1845 aa20.83■□□□□ 0.93
CD9-209ENST00000540891 CLRN2A0PK11 232 aa20.83■□□□□ 0.93
CD9-209ENST00000540891 RBM5P52756 815 aaKnown RBP eCLIP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms