RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TMEM87A	Q8NBN3	555 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	KIF1BP	Q96EK5	621 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	USP54	Q70EL1	1684 aa		6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	GOLGA6L6	A8MZA4	724 aa		6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CAMTA2	O94983	1202 aa		6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	STYK1	Q6J9G0	422 aa		6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	PRPF40B	Q6NWY9	871 aa	Known RBP	6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	OGFOD1	Q8N543	542 aa		6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	JAKMIP1	Q96N16	626 aa	Known RBP	6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TCHH	Q07283	1943 aa		6.65	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CTSW	P56202	376 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ARID5B	Q14865	1188 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TPD52L1	Q16890	204 aa	Predicted RBP	6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TTC6	Q86TZ1	520 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TTC14	Q96N46	770 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PPEF1	O14829	653 aa	Predicted RBP	6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CTIF	O43310	598 aa	Known RBP	6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MYO1B	O43795	1136 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GYS1	P13807	737 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TYRO3	Q06418	890 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ANO6	Q4KMQ2	910 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	RUFY2	Q8WXA3	655 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	DACT1	Q9NYF0	836 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MRVI1	Q9Y6F6	885 aa		6.65	□□□□□ -1.35
RAPGEF4-215	ENST00000540783		A0A087WWV3	80 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	VGLL3	A8MV65	326 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SGSM2	O43147	1006 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PTH1R	Q03431	593 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CWF19L2	Q2TBE0	894 aa	Known RBP	6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	AKT1S1	Q96B36	256 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CRAMP1	Q96RY5	1269 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LSG1	Q9H089	658 aa	Known RBP	6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CBX8	Q9HC52	389 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PDRG1	Q9NUG6	133 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ATP6V1D	Q9Y5K8	247 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CDHR2	Q9BYE9	1310 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GLI3	P10071	1580 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	FGD1	P98174	961 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TNIP1	Q15025	636 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MAP3K11	Q16584	847 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TBC1D9B	Q66K14	1250 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	FAM200A	Q8TCP9	573 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NUP62CL	Q9H1M0	184 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GOLGA6L4	A6NEF3	574 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ERICH4	A6NGS2	130 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	UFL1	O94874	794 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	STK3	Q13188	491 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GRAP	Q13588	217 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LARP1B	Q659C4	914 aa	Known RBP	6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CDC37L1	Q7L3B6	337 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CCDC112	Q8NEF3	446 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GRAPL	Q8TC17	118 aa	Predicted RBP	6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ISCA1	Q9BUE6	129 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TAOK3	Q9H2K8	898 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TRMT1	Q9NXH9	659 aa	Known RBP	6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	OGFR	Q9NZT2	677 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	STAP2	Q9UGK3	403 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CTNNA3	Q9UI47	895 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LEMD3	Q9Y2U8	911 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MROH5	Q6ZUA9	1318 aa		6.64	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NBPF26	B4DH59	902 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PPIP5K2	O43314	1243 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	WDHD1	O75717	1129 aa	Predicted RBP	6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ITGA6	P23229	1130 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	GSTO1	P78417	241 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ME3	Q16798	604 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CCDC144B	Q3MJ40	725 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NBPF10	Q6P3W6	841 aa	Known RBP	6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CCDC144CP	Q8IYA2	1237 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NBPF15	Q8N660	670 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CACTIN	Q8WUQ7	758 aa	Known RBP	6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	USP44	Q9H0E7	712 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SIL1	Q9H173	461 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	DNAJC25	Q9H1X3	360 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TNMD	Q9H2S6	317 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	MAST3	O60307	1309 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	RAD50	Q92878	1312 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	USP27X	A6NNY8	438 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	HIP1	O00291	1037 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	CEBPZ	Q03701	1054 aa	Known RBP	6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ST3GAL1	Q11201	340 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ZNF827	Q17R98	1081 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PROSER3	Q2NL68	480 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ZNF34	Q8IZ26	560 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	RHPN1	Q8TCX5	695 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ST7	Q9NRC1	585 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	LRRC4B	Q9NT99	713 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	NF2	P35240	595 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	RBM5	P52756	815 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	FOSB	P53539	338 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	ERFE	Q4G0M1	354 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	SUSD4	Q5VX71	490 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PI4K2B	Q8TCG2	481 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TRERF1	Q96PN7	1200 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PNPLA7	Q6ZV29	1317 aa		6.63	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	PRAMEF22	A3QJZ6	481 aa		6.62	□□□□□ -1.35
RAPGEF4-215	ENST00000540783	TPM3	P06753	285 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 87 ms