RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ARFGAP3Q9NP61 516 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 VPS18Q9P253 973 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 ATRNO75882 1429 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 PRAMEF22A3QJZ6 481 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 EFCAB8A8MWE9 144 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 SMC2O95347 1197 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 C11orf91Q3C1V1 193 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 SARM1Q6SZW1 724 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 PIGBQ92521 554 aa10.99□□□□□ -0.65
CTNNA1-243ENST00000540387 ONECUT3O60422 494 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 EVCP57679 992 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 FAM182BQ5T319 152 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 KAT2BQ92831 832 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 ACSBG1Q96GR2 724 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 ZNF496Q96IT1 587 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 ADAMTS7Q9UKP4 1686 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 KIF3CO14782 793 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 EIF2S2P20042 333 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 LRRC31Q6UY01 552 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 TTC5Q8N0Z6 440 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 MRPL50Q8N5N7 158 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 CARD6Q9BX69 1037 aa10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 SRRTQ9BXP5 876 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-243ENST00000540387 SHANK3Q9BYB0 1731 aa10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 CALRP27797 417 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 HNRNPH1P31943 449 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 CCDC30Q5VVM6 783 aa10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 TBC1D22AQ8WUA7 517 aa10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 DACT1Q9NYF0 836 aa10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 ASAP1Q9ULH1 1129 aa10.97□□□□□ -0.65
CTNNA1-243ENST00000540387 SCN11AQ9UI33 1791 aa10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 GOLGA6L19H0YKK7 550 aa10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 SLC4A2P04920 1241 aa10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 ZNF772Q68DY9 489 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 RBM43Q6ZSC3 357 aaKnown RBP10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 TTC6Q86TZ1 520 aa10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 ESYT1Q9BSJ8 1104 aa10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 DNAI1Q9UI46 699 aa10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 GLI3P10071 1580 aa10.96□□□□□ -0.65
CTNNA1-243ENST00000540387 PSDA5PKW4 1024 aaPredicted RBP10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 APBB1O00213 710 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 C21orf2O43822 256 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 PTCD1O75127 700 aaKnown RBP10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 TUBB4AP04350 444 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 GNAI3P08754 354 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 HDGFL1Q5TGJ6 251 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 KCNV1Q6PIU1 500 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 ARHGAP45Q92619 1136 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 PLEKHA4Q9H4M7 779 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 AKAP2Q9Y2D5 859 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 KAT6BQ8WYB5 2073 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 MRC1P22897 1456 aa10.96□□□□□ -0.66
CTNNA1-243ENST00000540387 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 MAP2K7O14733 419 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 KCNQ2O43526 872 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 URI1O94763 535 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 ERLIN2O94905 339 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 IQCB1Q15051 598 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 LONRF2Q1L5Z9 754 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 LRRFIP1Q32MZ4 808 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 FAXDC2Q96IV6 333 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 SMC3Q9UQE7 1217 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 MTMR6Q9Y217 621 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 ABCC4O15439 1325 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 PHLPP2Q6ZVD8 1323 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 KLHL33A6NCF5 533 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 USP8P40818 1118 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 APOBRQ0VD83 1088 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 MIEF2Q96C03 454 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 IL17RAQ96F46 866 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 FMNL2Q96PY5 1086 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 PDE11AQ9HCR9 933 aa10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 RGS17Q9UGC6 210 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-243ENST00000540387 SRGAP3O43295 1099 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 GSDMDP57764 484 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 INHBEP58166 350 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 NBPF10Q6P3W6 841 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 G2E3Q7L622 706 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 PARD6BQ9BYG5 372 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 H0YHG0 523 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 PPFIA4O75335 1185 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 HOXB7P09629 217 aa10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 SARNPP82979 210 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-243ENST00000540387 TTC41PQ6P2S7 1318 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms