RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ADCK5Q3MIX3 580 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 E4F1Q66K89 784 aaPredicted RBP12.56□□□□□ -0.4
PBX1-212ENST00000540236 FAM47EQ6ZV65 393 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 DHX40Q8IX18 779 aaKnown RBP12.56□□□□□ -0.4
PBX1-212ENST00000540236 SLC35F6Q8N357 371 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 TANGO6Q9C0B7 1094 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 ARMCX6Q7L4S7 300 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 NUCKS1Q9H1E3 243 aaKnown RBP12.56□□□□□ -0.4
PBX1-212ENST00000540236 KLC4Q9NSK0 619 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 PHLPP2Q6ZVD8 1323 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 AKAP2Q9Y2D5 859 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 MYO1BO43795 1136 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 IMPACTQ9P2X3 320 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 RPAP1Q9BWH6 1393 aaPredicted RBP12.55□□□□□ -0.4
PBX1-212ENST00000540236 NMIQ13287 307 aaPredicted RBP12.55□□□□□ -0.4
PBX1-212ENST00000540236 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 RTEL1-TNFRSF6BF6WH68 1400 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 GNAI3P08754 354 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 PTH1RQ03431 593 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 ZKSCAN8Q15776 578 aaPredicted RBP12.55□□□□□ -0.4
PBX1-212ENST00000540236 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 RABGGTAQ92696 567 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 AKR1B15C9JRZ8 316 aaPredicted RBP12.55□□□□□ -0.4
PBX1-212ENST00000540236 CA8P35219 290 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 HAND2P61296 217 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 SRGAP1Q7Z6B7 1085 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 FAM114A2Q9NRY5 505 aa12.55□□□□□ -0.4
PBX1-212ENST00000540236 CREB3L3Q68CJ9 461 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 CCT4P50991 539 aaKnown RBP12.54□□□□□ -0.4
PBX1-212ENST00000540236 EHD4Q9H223 541 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 TLDC2A0PJX2 215 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 RXRAP19793 462 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 ANAPC15P60006 121 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 DBN1Q16643 649 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 VIMP08670 466 aaKnown RBP12.54□□□□□ -0.4
PBX1-212ENST00000540236 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 TMCO4Q5TGY1 634 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 CCDC129Q6ZRS4 1044 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 PARP9Q8IXQ6 854 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 GOLPH3LQ9H4A5 285 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 IDEP14735 1019 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 NPHP3Q7Z494 1330 aa12.54□□□□□ -0.4
PBX1-212ENST00000540236 VAMP4O75379 141 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 H2AFXP16104 143 aaPredicted RBP12.53□□□□□ -0.4
PBX1-212ENST00000540236 CCDC6Q16204 474 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 SULT6B1Q6IMI4 303 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
PBX1-212ENST00000540236 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
PBX1-212ENST00000540236 YEATS4O95619 227 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 IGBP1P78318 339 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 MGARPQ8TDB4 240 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 CCDC97Q96F63 343 aaPredicted RBP12.53□□□□□ -0.4
PBX1-212ENST00000540236 GGT7Q9UJ14 662 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 NDUFA8P51970 172 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 CCDC122Q5T0U0 273 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
PBX1-212ENST00000540236 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
PBX1-212ENST00000540236 TADA3O75528 432 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 MYO1EQ12965 1108 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 SPA17Q15506 151 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.4
PBX1-212ENST00000540236 CEP128Q6ZU80 1094 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 VPS16Q9H269 839 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 ANKRD62A6NC57 917 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 N4BP3O15049 544 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 ERCC3P19447 782 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 APBA1Q02410 837 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 TSC22D3Q99576 134 aa12.52□□□□□ -0.4
PBX1-212ENST00000540236 RPGRIP1LQ68CZ1 1315 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 VSNL1P62760 191 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 IRX1P78414 480 aaPredicted RBP12.52□□□□□ -0.41
PBX1-212ENST00000540236 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
PBX1-212ENST00000540236 PPFIA1Q13136 1202 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 PFDN1O60925 122 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 SETSIPP0DME0 302 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
PBX1-212ENST00000540236 FAM227BQ96M60 508 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 CEP89Q96ST8 783 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.41
PBX1-212ENST00000540236 ATP8B1O43520 1251 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 NLRP12P59046 1061 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 VPS53Q5VIR6 699 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 MAPK8IP1Q9UQF2 711 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 KANK1Q14678 1352 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms