RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 COL1A1P02452 1464 aaPredicted RBP8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 MYO5AQ9Y4I1 1855 aaKnown RBP8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 HMMRO75330 724 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 SURF6O75683 361 aaKnown RBP8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 DDNO94850 711 aaPredicted RBP8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 SASH1O94885 1247 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 EIF6P56537 245 aaKnown RBP8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 CXCL9Q07325 125 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 TFCP2Q12800 502 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 ATP2B3Q16720 1220 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 ZNF804AQ7Z570 1209 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 PODNQ7Z5L7 613 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 GPC2Q8N158 579 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 LPIN2Q92539 896 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 L3MBTL3Q96JM7 780 aaPredicted RBP8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 COA1Q9GZY4 146 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
LPCAT3-209ENST00000540060 RAD17O75943 681 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 SLC5A1P13866 664 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 IL1R1P14778 569 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 GYG1P46976 350 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 G3BP1Q13283 466 aaKnown RBP eCLIP8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 AAMPQ13685 434 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 CIAPIN1Q6FI81 312 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 DPY19L2Q6NUT2 758 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 EXOC6Q8TAG9 804 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 FAM84BQ96KN1 310 aaPredicted RBP8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 CD209Q9NNX6 404 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 KCNQ5Q9NR82 932 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 EXOC6BQ9Y2D4 811 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
LPCAT3-209ENST00000540060 A0A1B0GUL7 405 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 POTECB2RU33 542 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 G3V3G9 751 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 PSMD14O00487 310 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 IFIT1P09914 478 aaKnown RBP8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 SCNN1DP51172 638 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 IRX6P78412 446 aaPredicted RBP8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 OS9Q13438 667 aaPredicted RBP8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 TNIP1Q15025 636 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 DCAF8Q5TAQ9 597 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 NMRK2Q9NPI5 230 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 GPR108Q9NPR9 543 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 GJA3Q9Y6H8 435 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 MYH7P12883 1935 aa8.62□□□□□ -1.03
LPCAT3-209ENST00000540060 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 VIL1P09327 827 aaKnown RBP8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 ADORA1P30542 326 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 HIBADHP31937 336 aaKnown RBP8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 GMPSP49915 693 aaPredicted RBP8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 BCAMP50895 628 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 HSP90AB4PQ58FF6 505 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 TNNI3KQ59H18 835 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 CAVIN4Q5BKX8 364 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 DACT2Q5SW24 774 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 STRIP1Q5VSL9 837 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 FBXO33Q7Z6M2 555 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 ERC1Q8IUD2 1116 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 TDRD7Q8NHU6 1098 aaKnown RBP8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 FPGT-TNNI3KV9GXZ4 949 aa8.61□□□□□ -1.03
LPCAT3-209ENST00000540060 MYH2Q9UKX2 1941 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 FAM205AQ6ZU69 1335 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 MYO3BQ8WXR4 1341 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 IQCA1LA6NCM1 817 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 KIF3CO14782 793 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 RPS12P25398 132 aaKnown RBP8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 PHKA1P46020 1223 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 TIMM10P62072 90 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 GTF2IP78347 998 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 RSBN1LQ6PCB5 846 aaPredicted RBP8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 RHPN1Q8TCX5 695 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 KIF1BPQ96EK5 621 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 XAGE2Q96GT9 111 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 GMLQ99445 158 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 DCTPP1Q9H773 170 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 RRAGCQ9HB90 399 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 GPRC5DQ9NZD1 345 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 CDK5RAP2Q96SN8 1893 aa8.6□□□□□ -1.03
LPCAT3-209ENST00000540060 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 VEGFAP15692 232 aaPredicted RBP8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 HDAC1Q13547 482 aaPredicted RBP8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 CCDC102BQ68D86 513 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 TTLL5Q6EMB2 1281 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 CERS5Q8N5B7 392 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 AGBL3Q8NEM8 1001 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 DPF2Q92785 391 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 EAF2Q96CJ1 260 aaPredicted RBP8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 NEUROD6Q96NK8 337 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
LPCAT3-209ENST00000540060 MXD3Q9BW11 206 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms