RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 YTHDC2Q9H6S0 1430 aaKnown RBP5.93□□□□□ -1.46
C2CD3-214ENST00000540057 PHRF1Q9P1Y6 1649 aaKnown RBP5.93□□□□□ -1.46
C2CD3-214ENST00000540057 DCDC2BA2VCK2 349 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 FAM157BP0CG42 384 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 ARAFP10398 606 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 MAPTP10636 758 aaKnown RBP5.93□□□□□ -1.46
C2CD3-214ENST00000540057 EVA1CP58658 441 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 ZC3H6P61129 1189 aaKnown RBP5.93□□□□□ -1.46
C2CD3-214ENST00000540057 FLIIQ13045 1269 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 PLEKHM2Q8IWE5 1019 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 AIDAQ96BJ3 306 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 CABP1Q9NZU7 370 aa5.93□□□□□ -1.46
C2CD3-214ENST00000540057 ATP10DQ9P241 1426 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 ATP7BP35670 1465 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 USP17L3A6NCW0 530 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 USP17L4A6NCW7 530 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 BACH1O14867 736 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 ZBTB7BO15156 539 aaPredicted RBP5.92□□□□□ -1.46
C2CD3-214ENST00000540057 EFSO43281 561 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 PROCP04070 461 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 EPXP11678 715 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 TATP17735 454 aaPredicted RBP5.92□□□□□ -1.46
C2CD3-214ENST00000540057 CD33P20138 364 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 COL8A1P27658 744 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 CLDN10P78369 228 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 TXNRD1Q16881 649 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 COL13A1Q5TAT6 717 aaPredicted RBP5.92□□□□□ -1.46
C2CD3-214ENST00000540057 SAMD5Q5TGI4 173 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 USP17L2Q6R6M4 530 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 LINC00114Q6XXX2 140 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 USP17L1Q7RTZ2 530 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 SLC9A9Q8IVB4 645 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 WWC1Q8IX03 1113 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 C7orf43Q8WVR3 580 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 THRAP3Q9Y2W1 955 aaKnown RBP5.92□□□□□ -1.46
C2CD3-214ENST00000540057 LRRC37A3O60309 1634 aa5.92□□□□□ -1.46
C2CD3-214ENST00000540057 LMO7Q8WWI1 1683 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 KRBA1A5PL33 1030 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 NEURL1BA8MQ27 555 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 EML1O00423 815 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 RAD21O60216 631 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 DGKGP49619 791 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 PRELPP51888 382 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 SAFB2Q14151 953 aaKnown RBP eCLIP5.91□□□□□ -1.46
C2CD3-214ENST00000540057 TEAD4Q15561 434 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 ARSJQ5FYB0 599 aaPredicted RBP5.91□□□□□ -1.46
C2CD3-214ENST00000540057 TBCELQ5QJ74 424 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 SH3PXD2AQ5TCZ1 1133 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 FCHSD1Q86WN1 690 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 TNS4Q8IZW8 715 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 DNAJC5GQ8N7S2 189 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 SPOCK3Q9BQ16 436 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 MKL2Q9ULH7 1088 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 GOLGB1Q14789 3259 aaKnown RBP5.91□□□□□ -1.46
C2CD3-214ENST00000540057 PRR36Q9H6K5 1346 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
C2CD3-214ENST00000540057 PIK3C2GO75747 1445 aa5.91□□□□□ -1.46
C2CD3-214ENST00000540057 LOC105371045A0A1W2PR82 267 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 KHNYNO15037 678 aaKnown RBP5.9□□□□□ -1.46
C2CD3-214ENST00000540057 ATP9BO43861 1147 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 DKK1O94907 266 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 YBX3P16989 372 aaKnown RBP eCLIP5.9□□□□□ -1.46
C2CD3-214ENST00000540057 NLGN2Q8NFZ4 835 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 TPCN2Q8NHX9 752 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 L3MBTL2Q969R5 705 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 BTBD6Q96KE9 485 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 PRAM1Q96QH2 718 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 SUV39H2Q9H5I1 410 aa5.9□□□□□ -1.46
C2CD3-214ENST00000540057 COL24A1Q17RW2 1714 aa5.9□□□□□ -1.47
C2CD3-214ENST00000540057 PAPPAQ13219 1627 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 AKAP12Q02952 1782 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 GRIN3BO60391 1043 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 ADH6P28332 368 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 NOS2P35228 1153 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 ITGAEP38570 1179 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 DDB1Q16531 1140 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 HDGFL1Q5TGJ6 251 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 NUTM2GQ5VZR2 741 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 CCDC102BQ68D86 513 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 TRIM50Q86XT4 487 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 MARCH10Q8NA82 808 aaPredicted RBP5.89□□□□□ -1.47
C2CD3-214ENST00000540057 MDFIQ99750 246 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 RRAGCQ9HB90 399 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 AVENQ9NQS1 362 aaPredicted RBP5.89□□□□□ -1.47
C2CD3-214ENST00000540057 ADCY9O60503 1353 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 AATKQ6ZMQ8 1374 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 ANKRD30BQ9BXX2 1392 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 BCL9O00512 1426 aa5.89□□□□□ -1.47
C2CD3-214ENST00000540057 MSTNO14793 375 aa5.88□□□□□ -1.47
C2CD3-214ENST00000540057 GRIN2CQ14957 1233 aa5.88□□□□□ -1.47
C2CD3-214ENST00000540057 RGL3Q3MIN7 710 aa5.88□□□□□ -1.47
C2CD3-214ENST00000540057 ZNF468Q5VIY5 522 aaPredicted RBP5.88□□□□□ -1.47
C2CD3-214ENST00000540057 NGDNQ8NEJ9 315 aaKnown RBP5.88□□□□□ -1.47
C2CD3-214ENST00000540057 ZNF526Q8TF50 670 aaPredicted RBP5.88□□□□□ -1.47
C2CD3-214ENST00000540057 HIRIP3Q9BW71 556 aaPredicted RBP5.88□□□□□ -1.47
C2CD3-214ENST00000540057 TSPAN10Q9H1Z9 355 aaPredicted RBP5.88□□□□□ -1.47
C2CD3-214ENST00000540057 CPDO75976 1380 aa5.88□□□□□ -1.47
C2CD3-214ENST00000540057 CRB1P82279 1406 aa5.88□□□□□ -1.47
C2CD3-214ENST00000540057 COL5A2P05997 1499 aaPredicted RBP5.88□□□□□ -1.47
C2CD3-214ENST00000540057 TULP4Q9NRJ4 1543 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms