RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SNRKQ9NRH2 765 aa23.05■■□□□ 1.28
TNFRSF1A-213ENST00000540022 GNL3LQ9NVN8 582 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-213ENST00000540022 HMG20BQ9P0W2 317 aa23.05■■□□□ 1.28
TNFRSF1A-213ENST00000540022 KIAA2012Q0VF49 1180 aa23.04■■□□□ 1.28
TNFRSF1A-213ENST00000540022 TDRD7Q8NHU6 1098 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-213ENST00000540022 EDC3Q96F86 508 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-213ENST00000540022 DNAJC2Q99543 621 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-213ENST00000540022 IARSP41252 1262 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 ZAP70P43403 619 aa23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 COA1Q9GZY4 146 aa23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 PPIP5K2O43314 1243 aa23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 IL1R1P14778 569 aa23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 SDSP20132 328 aa23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 DOK7Q18PE1 504 aa23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 SPATA5Q8NB90 893 aa23.03■■□□□ 1.28
TNFRSF1A-213ENST00000540022 COL1A1P02452 1464 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1A-213ENST00000540022 GLTPD2A6NH11 291 aa23.02■■□□□ 1.28
TNFRSF1A-213ENST00000540022 TRIM6-TRIM34B2RNG4 842 aa23.01■■□□□ 1.27
TNFRSF1A-213ENST00000540022 SEMA3EO15041 775 aa23.01■■□□□ 1.27
TNFRSF1A-213ENST00000540022 ZBTB22O15209 634 aa23.01■■□□□ 1.27
TNFRSF1A-213ENST00000540022 FRAT2O75474 233 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1A-213ENST00000540022 ANTXR1Q9H6X2 564 aa23.01■■□□□ 1.27
TNFRSF1A-213ENST00000540022 DBNDD1Q9H9R9 158 aa23.01■■□□□ 1.27
TNFRSF1A-213ENST00000540022 DENND2AQ9ULE3 1009 aa23.01■■□□□ 1.27
TNFRSF1A-213ENST00000540022 CEP350Q5VT06 3117 aa23■■□□□ 1.27
TNFRSF1A-213ENST00000540022 GOLIM4O00461 696 aa23■■□□□ 1.27
TNFRSF1A-213ENST00000540022 LARGE2Q8N3Y3 721 aa23■■□□□ 1.27
TNFRSF1A-213ENST00000540022 RILPL2Q969X0 211 aa23■■□□□ 1.27
TNFRSF1A-213ENST00000540022 VPS33BQ9H267 617 aa23■■□□□ 1.27
TNFRSF1A-213ENST00000540022 PAG1Q9NWQ8 432 aa23■■□□□ 1.27
TNFRSF1A-213ENST00000540022 WDR90Q96KV7 1748 aa22.99■■□□□ 1.27
TNFRSF1A-213ENST00000540022 G3V3G9 751 aa22.99■■□□□ 1.27
TNFRSF1A-213ENST00000540022 CYP2E1P05181 493 aaPredicted RBP22.99■■□□□ 1.27
TNFRSF1A-213ENST00000540022 DCAF8Q5TAQ9 597 aa22.99■■□□□ 1.27
TNFRSF1A-213ENST00000540022 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
TNFRSF1A-213ENST00000540022 CNTROBQ8N137 903 aa22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 EVI5LQ96CN4 794 aa22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 PDS5AQ29RF7 1337 aaKnown RBP22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 ECE2O60344 883 aa22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 TOMM70O94826 608 aa22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 CHAF1AQ13111 956 aaPredicted RBP22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 PODNQ7Z5L7 613 aa22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 JAG2Q9Y219 1238 aa22.98■■□□□ 1.27
TNFRSF1A-213ENST00000540022 TBC1D9Q6ZT07 1266 aa22.97■■□□□ 1.27
TNFRSF1A-213ENST00000540022 KCNQ5Q9NR82 932 aa22.97■■□□□ 1.27
TNFRSF1A-213ENST00000540022 YDJCA8MPS7 323 aa22.96■■□□□ 1.27
TNFRSF1A-213ENST00000540022 PIH1D3Q9NQM4 214 aaKnown RBP22.96■■□□□ 1.27
TNFRSF1A-213ENST00000540022 KBTBD3Q8NAB2 608 aa22.95■■□□□ 1.26
TNFRSF1A-213ENST00000540022 GTF2IP78347 998 aa22.94■■□□□ 1.26
TNFRSF1A-213ENST00000540022 TTF1Q15361 905 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF1A-213ENST00000540022 DPY19L2Q6NUT2 758 aa22.94■■□□□ 1.26
TNFRSF1A-213ENST00000540022 NIM1KQ8IY84 436 aa22.94■■□□□ 1.26
TNFRSF1A-213ENST00000540022 FSD1Q9BTV5 496 aa22.94■■□□□ 1.26
TNFRSF1A-213ENST00000540022 FAM205AQ6ZU69 1335 aa22.94■■□□□ 1.26
TNFRSF1A-213ENST00000540022 AKAP11Q9UKA4 1901 aa22.94■■□□□ 1.26
TNFRSF1A-213ENST00000540022 POTECB2RU33 542 aa22.93■■□□□ 1.26
TNFRSF1A-213ENST00000540022 WDR66Q8TBY9 1149 aa22.93■■□□□ 1.26
TNFRSF1A-213ENST00000540022 JDP2Q8WYK2 163 aa22.93■■□□□ 1.26
TNFRSF1A-213ENST00000540022 FZD9O00144 591 aa22.92■■□□□ 1.26
TNFRSF1A-213ENST00000540022 ABCF2Q9UG63 623 aa22.92■■□□□ 1.26
TNFRSF1A-213ENST00000540022 ZNF541Q9H0D2 1346 aa22.92■■□□□ 1.26
TNFRSF1A-213ENST00000540022 TTLL5Q6EMB2 1281 aa22.92■■□□□ 1.26
TNFRSF1A-213ENST00000540022 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1A-213ENST00000540022 ZNRF3Q9ULT6 936 aa22.92■■□□□ 1.26
TNFRSF1A-213ENST00000540022 SALL1Q9NSC2 1324 aa22.91■■□□□ 1.26
TNFRSF1A-213ENST00000540022 SCN4AP35499 1836 aa22.91■■□□□ 1.26
TNFRSF1A-213ENST00000540022 IDH1O75874 414 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1A-213ENST00000540022 DDNO94850 711 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-213ENST00000540022 CHGBP05060 677 aa22.91■■□□□ 1.26
TNFRSF1A-213ENST00000540022 VEGFAP15692 232 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-213ENST00000540022 FBXW7Q969H0 707 aa22.91■■□□□ 1.26
TNFRSF1A-213ENST00000540022 CDC45O75419 566 aa22.9■■□□□ 1.26
TNFRSF1A-213ENST00000540022 RAD17O75943 681 aa22.9■■□□□ 1.26
TNFRSF1A-213ENST00000540022 HSPA6P17066 643 aa22.9■■□□□ 1.26
TNFRSF1A-213ENST00000540022 LRP2BPQ9P2M1 347 aa22.9■■□□□ 1.26
TNFRSF1A-213ENST00000540022 CHMLP26374 656 aa22.89■■□□□ 1.26
TNFRSF1A-213ENST00000540022 PRDX5P30044 214 aa22.89■■□□□ 1.26
TNFRSF1A-213ENST00000540022 CXCL9Q07325 125 aa22.89■■□□□ 1.26
TNFRSF1A-213ENST00000540022 GRIK5Q16478 980 aa22.89■■□□□ 1.26
TNFRSF1A-213ENST00000540022 MFSD14BQ5SR56 506 aa22.89■■□□□ 1.26
TNFRSF1A-213ENST00000540022 STRIP1Q5VSL9 837 aa22.89■■□□□ 1.26
TNFRSF1A-213ENST00000540022 MXD3Q9BW11 206 aa22.89■■□□□ 1.26
TNFRSF1A-213ENST00000540022 USP17L3A6NCW0 530 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 USP17L4A6NCW7 530 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 SLFNL1Q499Z3 407 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 C8orf34Q49A92 452 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 DACT2Q5SW24 774 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 USP17L1Q7RTZ2 530 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ZGPATQ8N5A5 531 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 CERS5Q8N5B7 392 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 TBC1D22AQ8WUA7 517 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 RFX7Q2KHR2 1363 aa22.88■■□□□ 1.25
TNFRSF1A-213ENST00000540022 MAP3K12Q12852 859 aa22.87■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ERICH6Q7L0X2 663 aa22.87■■□□□ 1.25
TNFRSF1A-213ENST00000540022 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.87■■□□□ 1.25
TNFRSF1A-213ENST00000540022 RAI14Q9P0K7 980 aa22.87■■□□□ 1.25
TNFRSF1A-213ENST00000540022 PSMD14O00487 310 aa22.86■■□□□ 1.25
TNFRSF1A-213ENST00000540022 RNF113AO15541 343 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1A-213ENST00000540022 SLC9C2Q5TAH2 1124 aa22.86■■□□□ 1.25
TNFRSF1A-213ENST00000540022 SPTY2D1Q68D10 685 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms