RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
SNRPA1-203ENST00000540017 MYOZ2Q9NPC6 264 aa22.73■■□□□ 1.23
SNRPA1-203ENST00000540017 FAM205AQ6ZU69 1335 aa22.73■■□□□ 1.23
SNRPA1-203ENST00000540017 SLC5A1P13866 664 aa22.72■■□□□ 1.23
SNRPA1-203ENST00000540017 TFCP2Q12800 502 aa22.72■■□□□ 1.23
SNRPA1-203ENST00000540017 CAVIN4Q5BKX8 364 aa22.72■■□□□ 1.23
SNRPA1-203ENST00000540017 DLK2Q6UY11 383 aa22.72■■□□□ 1.23
SNRPA1-203ENST00000540017 VPS37DQ86XT2 251 aa22.72■■□□□ 1.23
SNRPA1-203ENST00000540017 CEP85Q6P2H3 762 aa22.71■■□□□ 1.23
SNRPA1-203ENST00000540017 ADORA1P30542 326 aa22.7■■□□□ 1.22
SNRPA1-203ENST00000540017 FKBP1AP62942 108 aaKnown RBP22.7■■□□□ 1.22
SNRPA1-203ENST00000540017 SCARF1Q14162 830 aa22.7■■□□□ 1.22
SNRPA1-203ENST00000540017 PDE3AQ14432 1141 aa22.7■■□□□ 1.22
SNRPA1-203ENST00000540017 ZBTB40Q9NUA8 1239 aa22.7■■□□□ 1.22
SNRPA1-203ENST00000540017 DDX19BQ9UMR2 479 aa22.7■■□□□ 1.22
SNRPA1-203ENST00000540017 TIMM10P62072 90 aa22.69■■□□□ 1.22
SNRPA1-203ENST00000540017 NBPF9Q3BBW0 867 aa22.69■■□□□ 1.22
SNRPA1-203ENST00000540017 OGFOD1Q8N543 542 aa22.69■■□□□ 1.22
SNRPA1-203ENST00000540017 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.69■■□□□ 1.22
SNRPA1-203ENST00000540017 GGA3Q9NZ52 723 aa22.69■■□□□ 1.22
SNRPA1-203ENST00000540017 POLR2AP24928 1970 aaKnown RBP22.69■■□□□ 1.22
SNRPA1-203ENST00000540017 F8W031 263 aaPredicted RBP22.68■■□□□ 1.22
SNRPA1-203ENST00000540017 CHAF1AQ13111 956 aaPredicted RBP22.68■■□□□ 1.22
SNRPA1-203ENST00000540017 G3BP1Q13283 466 aaKnown RBP eCLIP22.68■■□□□ 1.22
SNRPA1-203ENST00000540017 GRIK5Q16478 980 aa22.68■■□□□ 1.22
SNRPA1-203ENST00000540017 USP48Q86UV5 1035 aa22.68■■□□□ 1.22
SNRPA1-203ENST00000540017 CREBZFQ9NS37 354 aa22.68■■□□□ 1.22
SNRPA1-203ENST00000540017 PCDHAC2Q9Y5I4 1007 aa22.68■■□□□ 1.22
SNRPA1-203ENST00000540017 TMEM88BA6NKF7 163 aa22.67■■□□□ 1.22
SNRPA1-203ENST00000540017 MFSD14BQ5SR56 506 aa22.67■■□□□ 1.22
SNRPA1-203ENST00000540017 ANGEL2Q5VTE6 544 aaKnown RBP22.67■■□□□ 1.22
SNRPA1-203ENST00000540017 CST9Q5W186 159 aa22.67■■□□□ 1.22
SNRPA1-203ENST00000540017 CDC37L1Q7L3B6 337 aa22.67■■□□□ 1.22
SNRPA1-203ENST00000540017 ZBED3Q96IU2 234 aaPredicted RBP22.67■■□□□ 1.22
SNRPA1-203ENST00000540017 A0A1B0GUL7 405 aa22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 ADM5C9JUS6 153 aa22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 WNT10BO00744 389 aa22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 FRAT2O75474 233 aaPredicted RBP22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 PHKA1P46020 1223 aa22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 KRT26Q7Z3Y9 468 aa22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 DCPSQ96C86 337 aaKnown RBP22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 HDAC9Q9UKV0 1011 aa22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 COL1A1P02452 1464 aaPredicted RBP22.66■■□□□ 1.22
SNRPA1-203ENST00000540017 ARAP2Q8WZ64 1704 aa22.65■■□□□ 1.22
SNRPA1-203ENST00000540017 SURF6O75683 361 aaKnown RBP22.65■■□□□ 1.22
SNRPA1-203ENST00000540017 MMP14P50281 582 aa22.65■■□□□ 1.22
SNRPA1-203ENST00000540017 SCAF8Q9UPN6 1271 aaKnown RBP22.65■■□□□ 1.22
SNRPA1-203ENST00000540017 NOP58Q9Y2X3 529 aaKnown RBP22.65■■□□□ 1.22
SNRPA1-203ENST00000540017 SIRT2Q8IXJ6 389 aa22.64■■□□□ 1.21
SNRPA1-203ENST00000540017 XAGE2Q96GT9 111 aa22.64■■□□□ 1.21
SNRPA1-203ENST00000540017 AKAP2Q9Y2D5 859 aa22.64■■□□□ 1.21
SNRPA1-203ENST00000540017 TRPM7Q96QT4 1865 aa22.64■■□□□ 1.21
SNRPA1-203ENST00000540017 AOX1Q06278 1338 aa22.63■■□□□ 1.21
SNRPA1-203ENST00000540017 CCDC102BQ68D86 513 aa22.63■■□□□ 1.21
SNRPA1-203ENST00000540017 KLRG1Q96E93 195 aa22.63■■□□□ 1.21
SNRPA1-203ENST00000540017 CELF2O95319 508 aaKnown RBP22.62■■□□□ 1.21
SNRPA1-203ENST00000540017 RRP1P56182 461 aaKnown RBP22.62■■□□□ 1.21
SNRPA1-203ENST00000540017 CFAP100Q494V2 611 aa22.62■■□□□ 1.21
SNRPA1-203ENST00000540017 MTMR14Q8NCE2 650 aa22.62■■□□□ 1.21
SNRPA1-203ENST00000540017 NEUROD6Q96NK8 337 aa22.62■■□□□ 1.21
SNRPA1-203ENST00000540017 TTF2Q9UNY4 1162 aaKnown RBP22.62■■□□□ 1.21
SNRPA1-203ENST00000540017 OS9Q13438 667 aaPredicted RBP22.61■■□□□ 1.21
SNRPA1-203ENST00000540017 DLGAP5Q15398 846 aa22.61■■□□□ 1.21
SNRPA1-203ENST00000540017 SULF1Q8IWU6 871 aa22.61■■□□□ 1.21
SNRPA1-203ENST00000540017 ZNF408Q9H9D4 720 aa22.61■■□□□ 1.21
SNRPA1-203ENST00000540017 MYH13Q9UKX3 1938 aa22.61■■□□□ 1.21
SNRPA1-203ENST00000540017 PITPNM2Q9BZ72 1349 aa22.6■■□□□ 1.21
SNRPA1-203ENST00000540017 RPAP2Q8IXW5 612 aaPredicted RBP22.6■■□□□ 1.21
SNRPA1-203ENST00000540017 TBC1D22AQ8WUA7 517 aa22.6■■□□□ 1.21
SNRPA1-203ENST00000540017 PRMT6Q96LA8 375 aaPredicted RBP22.6■■□□□ 1.21
SNRPA1-203ENST00000540017 MKRN1Q9UHC7 482 aaKnown RBP22.6■■□□□ 1.21
SNRPA1-203ENST00000540017 EXOC6BQ9Y2D4 811 aa22.6■■□□□ 1.21
SNRPA1-203ENST00000540017 SPDYE2BA6NHP3 402 aa22.59■■□□□ 1.21
SNRPA1-203ENST00000540017 SPDYE6P0CI01 402 aa22.59■■□□□ 1.21
SNRPA1-203ENST00000540017 TNNI3KQ59H18 835 aa22.59■■□□□ 1.21
SNRPA1-203ENST00000540017 GNL3LQ9NVN8 582 aaKnown RBP22.59■■□□□ 1.21
SNRPA1-203ENST00000540017 FPGT-TNNI3KV9GXZ4 949 aa22.59■■□□□ 1.21
SNRPA1-203ENST00000540017 RBM5P52756 815 aaKnown RBP eCLIP22.58■■□□□ 1.216e-6■□□□□ 9
SNRPA1-203ENST00000540017 RASGRF1Q13972 1273 aa22.58■■□□□ 1.21
SNRPA1-203ENST00000540017 WDR66Q8TBY9 1149 aa22.58■■□□□ 1.21
SNRPA1-203ENST00000540017 CHMP4BQ9H444 224 aaKnown RBP22.58■■□□□ 1.21
SNRPA1-203ENST00000540017 GPR108Q9NPR9 543 aa22.58■■□□□ 1.21
SNRPA1-203ENST00000540017 SERPINA10Q9UK55 444 aa22.58■■□□□ 1.21
SNRPA1-203ENST00000540017 SEMA3EO15041 775 aa22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 ZBTB22O15209 634 aa22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 CRKP46108 304 aa22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 PRAMEF18Q5VWM3 479 aa22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 CDCA5Q96FF9 252 aa22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 DENND2AQ9ULE3 1009 aa22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 ABT1Q9ULW3 272 aaKnown RBP22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 CNTNAP1P78357 1384 aa22.57■■□□□ 1.2
SNRPA1-203ENST00000540017 RASSF10A6NK89 507 aa22.56■■□□□ 1.2
SNRPA1-203ENST00000540017 TLL2Q9Y6L7 1015 aa22.56■■□□□ 1.2
SNRPA1-203ENST00000540017 CLRN2A0PK11 232 aa22.55■■□□□ 1.2
SNRPA1-203ENST00000540017 PRDX5P30044 214 aa22.55■■□□□ 1.2
SNRPA1-203ENST00000540017 DBNDD2Q9BQY9 259 aa22.55■■□□□ 1.2
SNRPA1-203ENST00000540017 SUGT1Q9Y2Z0 365 aa22.55■■□□□ 1.2
SNRPA1-203ENST00000540017 ECM29Q5VYK3 1845 aa22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 DEFB115Q30KQ5 88 aa22.54■■□□□ 1.2
SNRPA1-203ENST00000540017 GORABQ5T7V8 394 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms