RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
PRPF19-204ENST00000539960 CERS5Q8N5B7 392 aa16.59■□□□□ 0.25
PRPF19-204ENST00000539960 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
PRPF19-204ENST00000539960 GPR108Q9NPR9 543 aa16.59■□□□□ 0.25
PRPF19-204ENST00000539960 PGAP2Q9UHJ9 254 aa16.59■□□□□ 0.25
PRPF19-204ENST00000539960 JAG2Q9Y219 1238 aa16.59■□□□□ 0.25
PRPF19-204ENST00000539960 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
PRPF19-204ENST00000539960 ADORA1P30542 326 aa16.58■□□□□ 0.24
PRPF19-204ENST00000539960 TBC1D10BQ4KMP7 808 aaPredicted RBP16.58■□□□□ 0.24
PRPF19-204ENST00000539960 HSP90AB4PQ58FF6 505 aa16.58■□□□□ 0.24
PRPF19-204ENST00000539960 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
PRPF19-204ENST00000539960 TRPM4Q8TD43 1214 aa16.58■□□□□ 0.24
PRPF19-204ENST00000539960 ZC3H15Q8WU90 426 aaKnown RBP16.58■□□□□ 0.24
PRPF19-204ENST00000539960 XAGE2Q96GT9 111 aa16.58■□□□□ 0.24
PRPF19-204ENST00000539960 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
PRPF19-204ENST00000539960 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
PRPF19-204ENST00000539960 EXOC6BQ9Y2D4 811 aa16.58■□□□□ 0.24
PRPF19-204ENST00000539960 EGFRP00533 1210 aa16.57■□□□□ 0.24
PRPF19-204ENST00000539960 KIAA0825Q8IV33 1275 aa16.57■□□□□ 0.24
PRPF19-204ENST00000539960 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
PRPF19-204ENST00000539960 ZBTB22O15209 634 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
PRPF19-204ENST00000539960 PHKA1P46020 1223 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 CHAF1AQ13111 956 aaPredicted RBP16.56■□□□□ 0.24
PRPF19-204ENST00000539960 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 MFSD14BQ5SR56 506 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 MAP1SQ66K74 1059 aaPredicted RBP16.56■□□□□ 0.24
PRPF19-204ENST00000539960 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 MYOZ2Q9NPC6 264 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
PRPF19-204ENST00000539960 TNNI3KQ59H18 835 aa16.55■□□□□ 0.24
PRPF19-204ENST00000539960 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
PRPF19-204ENST00000539960 TBC1D22AQ8WUA7 517 aa16.55■□□□□ 0.24
PRPF19-204ENST00000539960 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
PRPF19-204ENST00000539960 FPGT-TNNI3KV9GXZ4 949 aa16.55■□□□□ 0.24
PRPF19-204ENST00000539960 SEMA3EO15041 775 aa16.54■□□□□ 0.24
PRPF19-204ENST00000539960 RAB11FIP3O75154 756 aa16.54■□□□□ 0.24
PRPF19-204ENST00000539960 HSPA6P17066 643 aa16.54■□□□□ 0.24
PRPF19-204ENST00000539960 WDR66Q8TBY9 1149 aa16.54■□□□□ 0.24
PRPF19-204ENST00000539960 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
PRPF19-204ENST00000539960 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
PRPF19-204ENST00000539960 SCARF1Q14162 830 aa16.53■□□□□ 0.24
PRPF19-204ENST00000539960 RHPN1Q8TCX5 695 aa16.53■□□□□ 0.24
PRPF19-204ENST00000539960 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
PRPF19-204ENST00000539960 PSME4Q14997 1843 aa16.52■□□□□ 0.24
PRPF19-204ENST00000539960 AAMPQ13685 434 aa16.52■□□□□ 0.24
PRPF19-204ENST00000539960 NBPF9Q3BBW0 867 aa16.52■□□□□ 0.24
PRPF19-204ENST00000539960 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
PRPF19-204ENST00000539960 DBNDD2Q9BQY9 259 aa16.52■□□□□ 0.24
PRPF19-204ENST00000539960 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.24
PRPF19-204ENST00000539960 TTF2Q9UNY4 1162 aaKnown RBP16.52■□□□□ 0.24
PRPF19-204ENST00000539960 SUGT1Q9Y2Z0 365 aa16.52■□□□□ 0.24
PRPF19-204ENST00000539960 APBB1O00213 710 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 WNT10BO00744 389 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 DLGAP5Q15398 846 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 GRIK5Q16478 980 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 MTMR14Q8NCE2 650 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
PRPF19-204ENST00000539960 ZBED3Q96IU2 234 aaPredicted RBP16.51■□□□□ 0.23
PRPF19-204ENST00000539960 DCTPP1Q9H773 170 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
PRPF19-204ENST00000539960 ASTN2O75129 1339 aaPredicted RBP16.5■□□□□ 0.23
PRPF19-204ENST00000539960 PASKQ96RG2 1323 aa16.5■□□□□ 0.23
PRPF19-204ENST00000539960 UQCRFS1P1P0C7P4 283 aa16.5■□□□□ 0.23
PRPF19-204ENST00000539960 APLP1P51693 650 aa16.5■□□□□ 0.23
PRPF19-204ENST00000539960 CCDC158Q5M9N0 1113 aa16.5■□□□□ 0.23
PRPF19-204ENST00000539960 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
PRPF19-204ENST00000539960 MRIQ9BWK5 157 aa16.5■□□□□ 0.23
PRPF19-204ENST00000539960 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
PRPF19-204ENST00000539960 SERPINA10Q9UK55 444 aa16.5■□□□□ 0.23
PRPF19-204ENST00000539960 PDS5AQ29RF7 1337 aaKnown RBP16.49■□□□□ 0.23
PRPF19-204ENST00000539960 SALL1Q9NSC2 1324 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 TRAF5O00463 557 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 ARID4AP29374 1257 aaPredicted RBP16.49■□□□□ 0.23
PRPF19-204ENST00000539960 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
PRPF19-204ENST00000539960 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 ANGEL2Q5VTE6 544 aaKnown RBP16.49■□□□□ 0.23
PRPF19-204ENST00000539960 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 AACSQ86V21 672 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
PRPF19-204ENST00000539960 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 PRMT6Q96LA8 375 aaPredicted RBP16.49■□□□□ 0.23
PRPF19-204ENST00000539960 GLIS2Q9BZE0 524 aaPredicted RBP16.49■□□□□ 0.23
PRPF19-204ENST00000539960 GGA3Q9NZ52 723 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
PRPF19-204ENST00000539960 ZNF646O15015 1829 aaPredicted RBP16.48■□□□□ 0.23
PRPF19-204ENST00000539960 CRKP46108 304 aa16.48■□□□□ 0.23
PRPF19-204ENST00000539960 RBM5P52756 815 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRPF19-204ENST00000539960 FMR1Q06787 632 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRPF19-204ENST00000539960 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
PRPF19-204ENST00000539960 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
PRPF19-204ENST00000539960 ZNF512BQ96KM6 892 aaPredicted RBP16.48■□□□□ 0.23
PRPF19-204ENST00000539960 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
PRPF19-204ENST00000539960 PCDHAC2Q9Y5I4 1007 aa16.48■□□□□ 0.23
PRPF19-204ENST00000539960 PITPNM2Q9BZ72 1349 aa16.47■□□□□ 0.23
PRPF19-204ENST00000539960 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms