RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 HSPA1AP0DMV8 641 aaKnown RBP9.23□□□□□ -0.93
CCDC60-204ENST00000539847 HSPA1BP0DMV9 641 aaKnown RBP9.23□□□□□ -0.93
CCDC60-204ENST00000539847 IL6STP40189 918 aaPredicted RBP9.23□□□□□ -0.93
CCDC60-204ENST00000539847 HMGN5P82970 282 aaKnown RBP9.23□□□□□ -0.93
CCDC60-204ENST00000539847 PDE4CQ08493 712 aa9.23□□□□□ -0.93
CCDC60-204ENST00000539847 ERFEQ4G0M1 354 aa9.23□□□□□ -0.93
CCDC60-204ENST00000539847 TTC5Q8N0Z6 440 aa9.23□□□□□ -0.93
CCDC60-204ENST00000539847 TSR2Q969E8 191 aaKnown RBP9.23□□□□□ -0.93
CCDC60-204ENST00000539847 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
CCDC60-204ENST00000539847 SYAP1Q96A49 352 aaPredicted RBP9.23□□□□□ -0.93
CCDC60-204ENST00000539847 INTS4Q96HW7 963 aaKnown RBP9.23□□□□□ -0.93
CCDC60-204ENST00000539847 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
CCDC60-204ENST00000539847 IQCA1LA6NCM1 817 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 REC8O95072 547 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 LETM1O95202 739 aaPredicted RBP9.22□□□□□ -0.93
CCDC60-204ENST00000539847 LMOD3Q0VAK6 560 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 MTHFSDQ2M296 383 aaKnown RBP9.22□□□□□ -0.93
CCDC60-204ENST00000539847 PROX2Q3B8N5 592 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 STYK1Q6J9G0 422 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 PLEKHM2Q8IWE5 1019 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 MTMR14Q8NCE2 650 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 RBSNQ9H1K0 784 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 TAOK3Q9H2K8 898 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 GDPD2Q9HCC8 539 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 PRDM4Q9UKN5 801 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 HEG1Q9ULI3 1381 aa9.22□□□□□ -0.93
CCDC60-204ENST00000539847 AFDNP55196 1824 aaKnown RBP9.21□□□□□ -0.93
CCDC60-204ENST00000539847 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
CCDC60-204ENST00000539847 NCLP19338 710 aaKnown RBP9.21□□□□□ -0.94
CCDC60-204ENST00000539847 DNAJB2P25686 324 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC60-204ENST00000539847 NFE2L2Q16236 605 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 PRR5LQ6MZQ0 368 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 ZNF790Q6PG37 636 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 CLEC4GQ6UXB4 293 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 SIRT2Q8IXJ6 389 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 CALR3Q96L12 384 aaKnown RBP9.21□□□□□ -0.94
CCDC60-204ENST00000539847 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 PRDM10Q9NQV6 1147 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 UBR2Q8IWV8 1755 aa9.21□□□□□ -0.94
CCDC60-204ENST00000539847 KLRG2A4D1S0 409 aaPredicted RBP9.2□□□□□ -0.94
CCDC60-204ENST00000539847 MOXD2PA6NHM9 499 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 NBPF26B4DH59 902 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 SPTLC1O15269 473 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 TPM3P06753 285 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 SRGNP10124 158 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 HOXB1P14653 301 aaPredicted RBP9.2□□□□□ -0.94
CCDC60-204ENST00000539847 NDUFV2P19404 249 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 ANAPC15P60006 121 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 ST5P78524 1137 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 TEFQ10587 303 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 CUL4AQ13619 759 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 TBC1D9BQ66K14 1250 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 MCTP1Q6DN14 999 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 MAMSTRQ6ZN01 415 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 PACS2Q86VP3 889 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 LDHDQ86WU2 507 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 ANKRD44Q8N8A2 993 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 CNBD1Q8NA66 436 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 MASTLQ96GX5 879 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
CCDC60-204ENST00000539847 SETDB2Q96T68 719 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 MTMR7Q9Y216 660 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 R3HCC1Q9Y3T6 440 aaKnown RBP9.2□□□□□ -0.94
CCDC60-204ENST00000539847 CEMIPQ8WUJ3 1361 aa9.2□□□□□ -0.94
CCDC60-204ENST00000539847 TIAM2Q8IVF5 1701 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 GNAT3A8MTJ3 354 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 U2SURPO15042 1029 aaKnown RBP9.19□□□□□ -0.94
CCDC60-204ENST00000539847 C21orf2O43822 256 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 CAMTA2O94983 1202 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 HMOX1P09601 288 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 TUSC1Q2TAM9 212 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 CAVIN1Q6NZI2 390 aaKnown RBP9.19□□□□□ -0.94
CCDC60-204ENST00000539847 RSBN1LQ6PCB5 846 aaPredicted RBP9.19□□□□□ -0.94
CCDC60-204ENST00000539847 SULF1Q8IWU6 871 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 MYRIPQ8NFW9 859 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 ZNF622Q969S3 477 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCDC60-204ENST00000539847 FMNL2Q96PY5 1086 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 KCNK17Q96T54 332 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 PRM3Q9NNZ6 103 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 CNTNAP1P78357 1384 aa9.19□□□□□ -0.94
CCDC60-204ENST00000539847 DICER1Q9UPY3 1922 aaKnown RBP9.19□□□□□ -0.94
CCDC60-204ENST00000539847 UQCRHLA0A096LP55 91 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 PRPF40AO75400 957 aaKnown RBP9.18□□□□□ -0.94
CCDC60-204ENST00000539847 BRD1O95696 1058 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 UQCRHP07919 91 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 SCN7AQ01118 1682 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 QPCTQ16769 361 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 FER1L6Q2WGJ9 1857 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
CCDC60-204ENST00000539847 BICDL1Q6ZP65 573 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 IL17REQ8NFR9 667 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 GPT2Q8TD30 523 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 C7orf43Q8WVR3 580 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms