RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.52■□□□□ 0.71
TRAF3-204ENST00000539721 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.71
TRAF3-204ENST00000539721 SGSM2O43147 1006 aa19.51■□□□□ 0.71
TRAF3-204ENST00000539721 WASHC4Q2M389 1173 aa19.51■□□□□ 0.71
TRAF3-204ENST00000539721 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
TRAF3-204ENST00000539721 PDS5AQ29RF7 1337 aaKnown RBP19.51■□□□□ 0.71
TRAF3-204ENST00000539721 A0A0D9SFI3 127 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 ZBTB22O15209 634 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 RNF113AO15541 343 aaKnown RBP19.5■□□□□ 0.71
TRAF3-204ENST00000539721 IDH1O75874 414 aaKnown RBP19.5■□□□□ 0.71
TRAF3-204ENST00000539721 ZFYP08048 801 aaPredicted RBP19.5■□□□□ 0.71
TRAF3-204ENST00000539721 CCDC93Q567U6 631 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 ZSCAN25Q6NSZ9 544 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 TDRD7Q8NHU6 1098 aaKnown RBP19.5■□□□□ 0.71
TRAF3-204ENST00000539721 IL25Q9H293 177 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 CD209Q9NNX6 404 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 SNED1Q8TER0 1413 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 RAD50Q92878 1312 aa19.5■□□□□ 0.71
TRAF3-204ENST00000539721 CHAF1AQ13111 956 aaPredicted RBP19.49■□□□□ 0.71
TRAF3-204ENST00000539721 GRIPAP1Q4V328 841 aa19.49■□□□□ 0.71
TRAF3-204ENST00000539721 DALRD3Q5D0E6 543 aaKnown RBP19.49■□□□□ 0.71
TRAF3-204ENST00000539721 CHGBP05060 677 aa19.49■□□□□ 0.71
TRAF3-204ENST00000539721 RTFDC1Q9BY42 306 aaPredicted RBP19.49■□□□□ 0.71
TRAF3-204ENST00000539721 ANO2Q9NQ90 1003 aa19.49■□□□□ 0.71
TRAF3-204ENST00000539721 WWC3Q9ULE0 1092 aa19.49■□□□□ 0.71
TRAF3-204ENST00000539721 IL1R1P14778 569 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 MAP3K12Q12852 859 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 RTKN2Q8IZC4 609 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 SUPT20HQ8NEM7 779 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 C22orf23Q9BZE7 217 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 COA1Q9GZY4 146 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 LRP2BPQ9P2M1 347 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
TRAF3-204ENST00000539721 SLFNL1Q499Z3 407 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 ZMYM1Q5SVZ6 1142 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 SLC9C2Q5TAH2 1124 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 SOGA3Q5TF21 947 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 HELLSQ9NRZ9 838 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 G3V3G9 751 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 ADD2P35612 726 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 DCAF8Q5TAQ9 597 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 KIAA1211Q6ZU35 1233 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 TBC1D32Q96NH3 1257 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 USP26Q9BXU7 913 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 JAG2Q9Y219 1238 aa19.47■□□□□ 0.71
TRAF3-204ENST00000539721 CCDC88AQ3V6T2 1871 aa19.46■□□□□ 0.71
TRAF3-204ENST00000539721 MCMDC2Q4G0Z9 681 aa19.46■□□□□ 0.71
TRAF3-204ENST00000539721 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
TRAF3-204ENST00000539721 SEC62Q99442 399 aaKnown RBP19.46■□□□□ 0.71
TRAF3-204ENST00000539721 MAST2Q6P0Q8 1798 aa19.46■□□□□ 0.71
TRAF3-204ENST00000539721 CHD4Q14839 1912 aa19.45■□□□□ 0.7
TRAF3-204ENST00000539721 PDE6AP16499 860 aa19.45■□□□□ 0.7
TRAF3-204ENST00000539721 DOK7Q18PE1 504 aa19.45■□□□□ 0.7
TRAF3-204ENST00000539721 WDR66Q8TBY9 1149 aa19.45■□□□□ 0.7
TRAF3-204ENST00000539721 APPBP2Q92624 585 aa19.45■□□□□ 0.7
TRAF3-204ENST00000539721 RAI14Q9P0K7 980 aa19.45■□□□□ 0.7
TRAF3-204ENST00000539721 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
TRAF3-204ENST00000539721 ZGPATQ8N5A5 531 aaKnown RBP19.44■□□□□ 0.7
TRAF3-204ENST00000539721 MAGEB6Q8N7X4 407 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 ZNF532Q9HCE3 1301 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 CCDC129Q6ZRS4 1044 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 ERICH6Q7L0X2 663 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 PSMD1Q99460 953 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 BCS1LQ9Y276 419 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 MAST3O60307 1309 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 SALL1Q9NSC2 1324 aa19.44■□□□□ 0.7
TRAF3-204ENST00000539721 ARFGEF1Q9Y6D6 1849 aa19.43■□□□□ 0.7
TRAF3-204ENST00000539721 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
TRAF3-204ENST00000539721 AOC3Q16853 763 aa19.43■□□□□ 0.7
TRAF3-204ENST00000539721 SPTY2D1Q68D10 685 aaPredicted RBP19.43■□□□□ 0.7
TRAF3-204ENST00000539721 OSBP2Q969R2 916 aa19.43■□□□□ 0.7
TRAF3-204ENST00000539721 LSG1Q9H089 658 aaKnown RBP19.43■□□□□ 0.7
TRAF3-204ENST00000539721 CCDC171Q6TFL3 1326 aa19.43■□□□□ 0.7
TRAF3-204ENST00000539721 TCRBV5S4A2TA0A5A2 114 aa19.42■□□□□ 0.7
TRAF3-204ENST00000539721 M0R2C6 588 aa19.42■□□□□ 0.7
TRAF3-204ENST00000539721 EPB41L2O43491 1005 aaKnown RBP19.42■□□□□ 0.7
TRAF3-204ENST00000539721 RBM25P49756 843 aaKnown RBP19.42■□□□□ 0.7
TRAF3-204ENST00000539721 KIAA2012Q0VF49 1180 aa19.42■□□□□ 0.7
TRAF3-204ENST00000539721 DBNDD1Q9H9R9 158 aa19.42■□□□□ 0.7
TRAF3-204ENST00000539721 PPIP5K2O43314 1243 aa19.42■□□□□ 0.7
TRAF3-204ENST00000539721 FAM205AQ6ZU69 1335 aa19.42■□□□□ 0.7
TRAF3-204ENST00000539721 FHDC1Q9C0D6 1143 aaPredicted RBP19.42■□□□□ 0.7
TRAF3-204ENST00000539721 MCCP23508 829 aa19.41■□□□□ 0.7
TRAF3-204ENST00000539721 GTF2IP78347 998 aa19.41■□□□□ 0.7
TRAF3-204ENST00000539721 PTH1RQ03431 593 aa19.41■□□□□ 0.7
TRAF3-204ENST00000539721 PODNQ7Z5L7 613 aa19.41■□□□□ 0.7
TRAF3-204ENST00000539721 FBXW7Q969H0 707 aa19.41■□□□□ 0.7
TRAF3-204ENST00000539721 PUS7LQ9H0K6 701 aaKnown RBP19.41■□□□□ 0.7
TRAF3-204ENST00000539721 ECE2O60344 883 aa19.4■□□□□ 0.7
TRAF3-204ENST00000539721 LDHBP07195 334 aaKnown RBP19.4■□□□□ 0.7
TRAF3-204ENST00000539721 PRDX5P30044 214 aa19.4■□□□□ 0.7
TRAF3-204ENST00000539721 TBC1D22AQ8WUA7 517 aa19.4■□□□□ 0.7
TRAF3-204ENST00000539721 CYP7A1P22680 504 aa19.39■□□□□ 0.7
TRAF3-204ENST00000539721 NAA16Q6N069 864 aaPredicted RBP19.39■□□□□ 0.7
TRAF3-204ENST00000539721 MECOMQ03112 1051 aa19.39■□□□□ 0.69
TRAF3-204ENST00000539721 MFSD14BQ5SR56 506 aa19.39■□□□□ 0.69
TRAF3-204ENST00000539721 DZIP1Q86YF9 867 aaKnown RBP19.39■□□□□ 0.69
TRAF3-204ENST00000539721 NSUN4Q96CB9 384 aaKnown RBP19.39■□□□□ 0.69
TRAF3-204ENST00000539721 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms