RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CEP83Q9Y592 693 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 KRT79Q5XKE5 535 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 ACSBG1Q96GR2 724 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 NSRP1Q9H0G5 558 aaKnown RBP7.35□□□□□ -1.23
LSAMP-207ENST00000539563 KIF5AQ12840 1032 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 CEP63Q96MT8 703 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 STK24Q9Y6E0 443 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 FAM13AO94988 1023 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 LDHBP07195 334 aaKnown RBP7.35□□□□□ -1.23
LSAMP-207ENST00000539563 ASIC1P78348 528 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 IP6K1Q92551 441 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 IRS4O14654 1257 aaPredicted RBP7.35□□□□□ -1.23
LSAMP-207ENST00000539563 VAMP4O75379 141 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 TNNI2P48788 182 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 SLC39A6Q13433 755 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
LSAMP-207ENST00000539563 MSANTD4Q8NCY6 345 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 DENND2AQ9ULE3 1009 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 KRT86O43790 486 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 NEK11Q8NG66 645 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 ZMYM4Q5VZL5 1548 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 OPA1O60313 960 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 RAB11FIP4Q86YS3 637 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 CCDC65Q8IXS2 484 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 RNMTO43148 476 aaKnown RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 HS2ST1Q7LGA3 356 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 AOPEPQ8N6M6 819 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 PPP1R14CQ8TAE6 165 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 LRRC2Q9BYS8 371 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 C19orf44Q9H6X5 657 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 EDC4Q6P2E9 1401 aaKnown RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 CTAGE15A4D2H0 777 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 CTAGE8P0CG41 777 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 APBB1IPQ7Z5R6 666 aaPredicted RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 CTAGE6Q86UF2 777 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 SKAP1Q86WV1 359 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 CTAGE4Q8IX94 777 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 RBM17Q96I25 401 aaKnown RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 CDCA7Q9BWT1 371 aaPredicted RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 PICALMQ13492 652 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 BICC1Q9H694 974 aaKnown RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 DACT1Q9NYF0 836 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 DHX58Q96C10 678 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 CCDC77Q9BR77 488 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 LLPHQ9BRT6 129 aaKnown RBP7.34□□□□□ -1.23
LSAMP-207ENST00000539563 ATP2A1O14983 1001 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 TUBBP07437 444 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 MCM9Q9NXL9 1143 aa7.34□□□□□ -1.23
LSAMP-207ENST00000539563 MARCKSP29966 332 aaPredicted RBP7.34□□□□□ -1.24
LSAMP-207ENST00000539563 PPM1FP49593 454 aaPredicted RBP7.34□□□□□ -1.24
LSAMP-207ENST00000539563 GOLGA1Q92805 767 aa7.34□□□□□ -1.24
LSAMP-207ENST00000539563 TYRO3Q06418 890 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 JAKMIP2Q96AA8 810 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 DDX21Q9NR30 783 aaKnown RBP eCLIP7.33□□□□□ -1.24
LSAMP-207ENST00000539563 SKILP12757 684 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 SYT1P21579 422 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 AK2P54819 239 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 SH2D4AQ9H788 454 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 C16orf71Q8IYS4 520 aaPredicted RBP7.33□□□□□ -1.24
LSAMP-207ENST00000539563 TMEM87BQ96K49 555 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 ZBTB40Q9NUA8 1239 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 ELP1O95163 1332 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 AOX1Q06278 1338 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 F8W031 263 aaPredicted RBP7.33□□□□□ -1.24
LSAMP-207ENST00000539563 RPL13P26373 211 aaKnown RBP7.33□□□□□ -1.24
LSAMP-207ENST00000539563 GLT8D2Q9H1C3 349 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 TFCP2Q12800 502 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 NOLC1Q14978 699 aaKnown RBP eCLIP7.33□□□□□ -1.24
LSAMP-207ENST00000539563 RAB3GAP1Q15042 981 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 TRMT1LQ7Z2T5 733 aaKnown RBP7.33□□□□□ -1.24
LSAMP-207ENST00000539563 MRVI1Q9Y6F6 885 aa7.33□□□□□ -1.24
LSAMP-207ENST00000539563 IQUBQ8NA54 791 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PA2G4Q9UQ80 394 aaKnown RBP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 ATP7AQ04656 1500 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 GCP02774 474 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 IVLP07476 585 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PARP1P09874 1014 aaKnown RBP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 FBLN1P23142 703 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 HOXC9P31274 260 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PARP10Q53GL7 1025 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 HS1BP3Q53T59 392 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 TTC6Q86TZ1 520 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 A0A1W2PP64 1363 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 COL17A1Q9UMD9 1497 aaPredicted RBP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 HOXB7P09629 217 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 APOBRQ0VD83 1088 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 CCDC129Q6ZRS4 1044 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PLEKHM2Q8IWE5 1019 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 SMC5Q8IY18 1101 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PLBD2Q8NHP8 589 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 LRRC59Q96AG4 307 aaKnown RBP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 IQCGQ9H095 443 aaKnown RBP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 MCM7P33993 719 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 TRAPPC8Q9Y2L5 1435 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 CHMLP26374 656 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms