RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 USP17L3A6NCW0 530 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 USP17L4A6NCW7 530 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 LINC01387J3KSC0 135 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 GAS2O43903 313 aaKnown RBP5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 BMP3P12645 472 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 CLDN10P78369 228 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 LARP1Q6PKG0 1096 aaKnown RBP5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 USP17L2Q6R6M4 530 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 USP17L1Q7RTZ2 530 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 UBXN4Q92575 508 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 OSBPL1AQ9BXW6 950 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
AC055720.1-201ENST00000539552 TARBP1Q13395 1621 aaKnown RBP5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 AQRO60306 1485 aaKnown RBP eCLIP5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 CARNS1A5YM72 827 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 C21orf2O43822 256 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 XYLBO75191 536 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 SEC13P55735 322 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 DGKZQ13574 1117 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 VSIG10LQ86VR7 867 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 PLEKHM2Q8IWE5 1019 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 FAM20CQ8IXL6 584 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 SIX5Q8N196 739 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 CMTR1Q8N1G2 835 aaKnown RBP5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 KLHL23Q8NBE8 558 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 AGBL5Q8NDL9 886 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 FAM46AQ96IP4 442 aaKnown RBP5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 PSMD1Q99460 953 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 KLK14Q9P0G3 267 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 MKRN1Q9UHC7 482 aaKnown RBP5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 DMGDHQ9UI17 866 aaKnown RBP5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 TRIM33Q9UPN9 1127 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 HIF3AQ9Y2N7 669 aa5.41□□□□□ -1.54
AC055720.1-201ENST00000539552 TMEM88BA6NKF7 163 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 SMNDC1O75940 238 aaKnown RBP eCLIP5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 MICAL2O94851 1124 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 ZNF16P17020 682 aaPredicted RBP5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 RXRBP28702 533 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 SOX18P35713 384 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 ELOAQ14241 798 aaKnown RBP5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 TAF7LQ5H9L4 462 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 ANKRD34AQ69YU3 496 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 FDX2Q6P4F2 183 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 DNAJC14Q6Y2X3 702 aaPredicted RBP5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 MFSD14AQ96MC6 490 aa5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 BCCIPQ9P287 314 aaKnown RBP eCLIP5.4□□□□□ -1.54
AC055720.1-201ENST00000539552 PTPRTO14522 1441 aa5.4□□□□□ -1.55
AC055720.1-201ENST00000539552 WISP1O95388 367 aa5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 CDC25BP30305 580 aa5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 ZC3H6P61129 1189 aaKnown RBP5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 CPSF6Q16630 551 aaKnown RBP eCLIP5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 UCN2Q96RP3 112 aa5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 BIN2Q9UBW5 565 aaPredicted RBP5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 NOVA2Q9UNW9 492 aaKnown RBP5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 BCS1LQ9Y276 419 aa5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 RTCBQ9Y3I0 505 aaKnown RBP5.39□□□□□ -1.55
AC055720.1-201ENST00000539552 SETBP1Q9Y6X0 1596 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 ANKRD62A6NC57 917 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 DBX1A6NMT0 343 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 BIN1O00499 593 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 CDC27P30260 824 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 SF3A1Q15459 793 aaKnown RBP5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 C11orf91Q3C1V1 193 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 FBLN7Q53RD9 439 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 CEP135Q66GS9 1140 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 TXNDC11Q6PKC3 985 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 RGL4Q8IZJ4 473 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 FBXL6Q8N531 539 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 GALNT11Q8NCW6 608 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 FAM200AQ8TCP9 573 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 METTL22Q9BUU2 404 aaPredicted RBP5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 HIRIP3Q9BW71 556 aaPredicted RBP5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 LACRTQ9GZZ8 138 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 CCDC39Q9UFE4 941 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 CEP170Q5SW79 1584 aa5.38□□□□□ -1.55
AC055720.1-201ENST00000539552 ADCY10Q96PN6 1610 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 MMP20O60882 483 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 VAMP1P23763 118 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 HOXA10P31260 410 aaPredicted RBP5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 CABP4P57796 275 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 ZNF326Q5BKZ1 582 aaKnown RBP5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 TICAM2Q86XR7 235 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 FLCNQ8NFG4 579 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 CARD10Q9BWT7 1032 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 RNF208Q9H0X6 261 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 PEG3Q9GZU2 1588 aa5.37□□□□□ -1.55
AC055720.1-201ENST00000539552 FSCN2O14926 492 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 EGFRP00533 1210 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 FOSL1P15407 271 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 IGFBP4P22692 258 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 GRNP28799 593 aaKnown RBP5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 HSPA1LP34931 641 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 TMEM164Q5U3C3 297 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 SLC38A3Q99624 504 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 BCL2L13Q9BXK5 485 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 SEC31BQ9NQW1 1179 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 SHROOM2Q13796 1616 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 RIMS1Q86UR5 1692 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms