RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PEAR1Q5VY43 1037 aaPredicted RBP10.74□□□□□ -0.69
CCDC7-209ENST00000539197 ZDHHC13Q8IUH4 622 aa10.74□□□□□ -0.69
CCDC7-209ENST00000539197 MTMR7Q9Y216 660 aa10.74□□□□□ -0.69
CCDC7-209ENST00000539197 POLR3DP05423 398 aaPredicted RBP10.73□□□□□ -0.69
CCDC7-209ENST00000539197 BMP3P12645 472 aa10.73□□□□□ -0.69
CCDC7-209ENST00000539197 RNF43Q68DV7 783 aa10.73□□□□□ -0.69
CCDC7-209ENST00000539197 FAM20CQ8IXL6 584 aa10.73□□□□□ -0.69
CCDC7-209ENST00000539197 RUSC1Q9BVN2 902 aa10.73□□□□□ -0.69
CCDC7-209ENST00000539197 METTL12A8MUP2 240 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 FAM13AO94988 1023 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 EDN3P14138 238 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 USP5P45974 858 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 EHHADHQ08426 723 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 C19orf57Q0VDD7 668 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 ASAP3Q8TDY4 903 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 SNX29Q8TEQ0 813 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 BSNDQ8WZ55 320 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 DBNDD2Q9BQY9 259 aa10.72□□□□□ -0.69
CCDC7-209ENST00000539197 DLGAP3O95886 979 aa10.71□□□□□ -0.69
CCDC7-209ENST00000539197 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
CCDC7-209ENST00000539197 FDX2Q6P4F2 183 aa10.71□□□□□ -0.69
CCDC7-209ENST00000539197 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.71□□□□□ -0.69
CCDC7-209ENST00000539197 FAM83CQ9BQN1 747 aa10.71□□□□□ -0.69
CCDC7-209ENST00000539197 KCNF1Q9H3M0 494 aa10.71□□□□□ -0.69
CCDC7-209ENST00000539197 ADAMTS4O75173 837 aa10.7□□□□□ -0.7
CCDC7-209ENST00000539197 GRIK1P39086 918 aa10.7□□□□□ -0.7
CCDC7-209ENST00000539197 IKBKEQ14164 716 aa10.7□□□□□ -0.7
CCDC7-209ENST00000539197 GJD3Q8N144 294 aa10.7□□□□□ -0.7
CCDC7-209ENST00000539197 HIF3AQ9Y2N7 669 aa10.7□□□□□ -0.7
CCDC7-209ENST00000539197 PRR19A6NJB7 356 aa10.69□□□□□ -0.7
CCDC7-209ENST00000539197 KIAA1324LA8MWY0 1029 aaPredicted RBP10.69□□□□□ -0.7
CCDC7-209ENST00000539197 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
CCDC7-209ENST00000539197 BEND4Q6ZU67 534 aa10.69□□□□□ -0.7
CCDC7-209ENST00000539197 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
CCDC7-209ENST00000539197 MEGF11A6BM72 1044 aa10.68□□□□□ -0.7
CCDC7-209ENST00000539197 INTS5Q6P9B9 1019 aaKnown RBP10.68□□□□□ -0.7
CCDC7-209ENST00000539197 BHLHE41Q9C0J9 482 aaPredicted RBP10.68□□□□□ -0.7
CCDC7-209ENST00000539197 ZFYVE28Q9HCC9 887 aa10.68□□□□□ -0.7
CCDC7-209ENST00000539197 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
CCDC7-209ENST00000539197 SGO2Q562F6 1265 aa10.67□□□□□ -0.7
CCDC7-209ENST00000539197 MCTP1Q6DN14 999 aa10.67□□□□□ -0.7
CCDC7-209ENST00000539197 SHKBP1Q8TBC3 707 aa10.67□□□□□ -0.7
CCDC7-209ENST00000539197 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
CCDC7-209ENST00000539197 LOC100289279A0A1B0GTE1 492 aa10.66□□□□□ -0.7
CCDC7-209ENST00000539197 ESRRAP11474 423 aaPredicted RBP10.66□□□□□ -0.7
CCDC7-209ENST00000539197 DRD2P14416 443 aa10.65□□□□□ -0.7
CCDC7-209ENST00000539197 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.7
CCDC7-209ENST00000539197 TMPRSS13Q9BYE2 586 aa10.65□□□□□ -0.7
CCDC7-209ENST00000539197 SERPINB4P48594 390 aa10.64□□□□□ -0.71
CCDC7-209ENST00000539197 ECM1Q16610 540 aa10.64□□□□□ -0.71
CCDC7-209ENST00000539197 USPL1Q5W0Q7 1092 aa10.64□□□□□ -0.71
CCDC7-209ENST00000539197 SHISA5Q8N114 240 aa10.64□□□□□ -0.71
CCDC7-209ENST00000539197 C12orf50Q8NA57 414 aaPredicted RBP10.64□□□□□ -0.71
CCDC7-209ENST00000539197 SOX17Q9H6I2 414 aaPredicted RBP10.64□□□□□ -0.71
CCDC7-209ENST00000539197 MAP4P27816 1152 aaKnown RBP10.63□□□□□ -0.71
CCDC7-209ENST00000539197 GSTM4Q03013 218 aa10.63□□□□□ -0.71
CCDC7-209ENST00000539197 MFSD14AQ96MC6 490 aa10.63□□□□□ -0.71
CCDC7-209ENST00000539197 OAS3Q9Y6K5 1087 aaKnown RBP10.63□□□□□ -0.71
CCDC7-209ENST00000539197 SPINK2P20155 84 aa10.62□□□□□ -0.71
CCDC7-209ENST00000539197 HOXA10P31260 410 aaPredicted RBP10.62□□□□□ -0.71
CCDC7-209ENST00000539197 SPRED3Q2MJR0 410 aa10.62□□□□□ -0.71
CCDC7-209ENST00000539197 SMG8Q8ND04 991 aaKnown RBP10.62□□□□□ -0.71
CCDC7-209ENST00000539197 KRTAP4-12Q9BQ66 201 aa10.62□□□□□ -0.71
CCDC7-209ENST00000539197 CYP4F12Q9HCS2 524 aa10.62□□□□□ -0.71
CCDC7-209ENST00000539197 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
CCDC7-209ENST00000539197 A0A1W2PP55 124 aa10.61□□□□□ -0.71
CCDC7-209ENST00000539197 WDR64B1ANS9 1081 aa10.61□□□□□ -0.71
CCDC7-209ENST00000539197 EIF4EBP3O60516 100 aaPredicted RBP10.61□□□□□ -0.71
CCDC7-209ENST00000539197 TIAF1O95411 115 aa10.61□□□□□ -0.71
CCDC7-209ENST00000539197 GRIA4P48058 902 aa10.61□□□□□ -0.71
CCDC7-209ENST00000539197 IRAK1P51617 712 aa10.61□□□□□ -0.71
CCDC7-209ENST00000539197 GP2P55259 537 aaKnown RBP10.61□□□□□ -0.71
CCDC7-209ENST00000539197 SUGCTQ9HAC7 445 aa10.61□□□□□ -0.71
CCDC7-209ENST00000539197 H3BRB1 525 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 ICMTO60725 284 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 CTSBP07858 339 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 RXRBP28702 533 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 ZNF423Q2M1K9 1284 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 GIMAP7Q8NHV1 300 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 TCF12Q99081 682 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 NRSN2Q9GZP1 204 aa10.6□□□□□ -0.71
CCDC7-209ENST00000539197 TUT1Q9H6E5 874 aaKnown RBP10.6□□□□□ -0.71
CCDC7-209ENST00000539197 EXOSC6Q5RKV6 272 aaKnown RBP10.59□□□□□ -0.71
CCDC7-209ENST00000539197 CDPF1Q6NVV7 123 aa10.59□□□□□ -0.71
CCDC7-209ENST00000539197 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
CCDC7-209ENST00000539197 DTX1Q86Y01 620 aa10.59□□□□□ -0.71
CCDC7-209ENST00000539197 FBXL6Q8N531 539 aa10.59□□□□□ -0.71
CCDC7-209ENST00000539197 A0A096LPE4 126 aa10.58□□□□□ -0.72
CCDC7-209ENST00000539197 A0A1W2PPZ6 126 aa10.58□□□□□ -0.72
CCDC7-209ENST00000539197 CCNJLQ8IV13 435 aa10.58□□□□□ -0.72
CCDC7-209ENST00000539197 GALNT12Q8IXK2 581 aa10.58□□□□□ -0.72
CCDC7-209ENST00000539197 FBLIM1Q8WUP2 373 aa10.58□□□□□ -0.72
CCDC7-209ENST00000539197 LIN7BQ9HAP6 207 aa10.58□□□□□ -0.72
CCDC7-209ENST00000539197 PAX4O43316 350 aa10.57□□□□□ -0.72
CCDC7-209ENST00000539197 PCDH1Q08174 1060 aa10.57□□□□□ -0.72
CCDC7-209ENST00000539197 ATG3Q9NT62 314 aa10.57□□□□□ -0.72
CCDC7-209ENST00000539197 ECEL1O95672 775 aa10.56□□□□□ -0.72
CCDC7-209ENST00000539197 F13BP05160 661 aa10.56□□□□□ -0.72
CCDC7-209ENST00000539197 USP11P51784 963 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms