RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 APOBRQ0VD83 1088 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 AXDND1Q5T1B0 1012 aaPredicted RBP8.17□□□□□ -1.1
PROM1-219ENST00000539194 TNMDQ9H2S6 317 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 NLRP2Q9NX02 1062 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 CCZ1BP86790 482 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 CCZ1P86791 482 aaPredicted RBP8.17□□□□□ -1.1
PROM1-219ENST00000539194 RBM10P98175 930 aaKnown RBP8.17□□□□□ -1.1
PROM1-219ENST00000539194 STK3Q13188 491 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 CACTINQ8WUQ7 758 aaKnown RBP8.17□□□□□ -1.1
PROM1-219ENST00000539194 TACC3Q9Y6A5 838 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 BCL9O00512 1426 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 A1BGP04217 495 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 CKAP2LQ8IYA6 745 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 VSIG10Q8N0Z9 540 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 LINC00301Q8NCQ3 95 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 CARD10Q9BWT7 1032 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 COL24A1Q17RW2 1714 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 LRMPQ12912 555 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 NCAPHQ15003 741 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 CHRNA2Q15822 529 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 ZNF594Q96JF6 807 aaPredicted RBP8.16□□□□□ -1.1
PROM1-219ENST00000539194 BCL2L12Q9HB09 334 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 CFAP45Q9UL16 551 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 GOLIM4O00461 696 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 CABP4P57796 275 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 TCIRG1Q13488 830 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 TTLL5Q6EMB2 1281 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 LRRC2Q9BYS8 371 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 HPSEQ9Y251 543 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 SBF2Q86WG5 1849 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 PCCAP05165 728 aaPredicted RBP8.16□□□□□ -1.1
PROM1-219ENST00000539194 ADORA1P30542 326 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 ADALQ6DHV7 355 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 LRRC8AQ8IWT6 810 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 MPNDQ8N594 471 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 SLC4A9Q96Q91 983 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 PUS7LQ9H0K6 701 aaKnown RBP8.16□□□□□ -1.1
PROM1-219ENST00000539194 DNAJC25Q9H1X3 360 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 GPHNQ9NQX3 736 aaPredicted RBP8.16□□□□□ -1.1
PROM1-219ENST00000539194 PCDHA7Q9UN72 937 aa8.16□□□□□ -1.1
PROM1-219ENST00000539194 ZBTB7CA1YPR0 619 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 KIF28PB7ZC32 967 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 FAM160A1Q05DH4 1040 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 NTRK3Q16288 839 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 TTC5Q8N0Z6 440 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 MAP3K14Q99558 947 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 CCDC94Q9BW85 323 aaPredicted RBP8.15□□□□□ -1.1
PROM1-219ENST00000539194 OSBPL5Q9H0X9 879 aaPredicted RBP8.15□□□□□ -1.1
PROM1-219ENST00000539194 NCOA5Q9HCD5 579 aaKnown RBP8.15□□□□□ -1.1
PROM1-219ENST00000539194 FAM217BQ9NTX9 383 aaPredicted RBP8.15□□□□□ -1.1
PROM1-219ENST00000539194 MAST2Q6P0Q8 1798 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 MYH13Q9UKX3 1938 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 RIOK3O14730 519 aaKnown RBP8.15□□□□□ -1.1
PROM1-219ENST00000539194 CTAGE5O15320 804 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 FGAP02671 866 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 FGFR2P21802 821 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 ZNF165P49910 485 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 TSC1Q92574 1164 aa8.15□□□□□ -1.1
PROM1-219ENST00000539194 DNAJC2Q99543 621 aaKnown RBP8.15□□□□□ -1.1
PROM1-219ENST00000539194 PTPAQ15257 358 aa8.15□□□□□ -1.11
PROM1-219ENST00000539194 ZCRB1Q8TBF4 217 aaKnown RBP8.15□□□□□ -1.11
PROM1-219ENST00000539194 MAP3K15Q6ZN16 1313 aa8.15□□□□□ -1.11
PROM1-219ENST00000539194 ARID4AP29374 1257 aaPredicted RBP8.14□□□□□ -1.11
PROM1-219ENST00000539194 KCNJ6P48051 423 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 CCDC186Q7Z3E2 898 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 CADPS2Q86UW7 1296 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
PROM1-219ENST00000539194 FBXO18Q8NFZ0 1043 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 MROH7-TTC4A0A0A0MT08 1334 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 MCAMP43121 646 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 NCBP1Q09161 790 aaKnown RBP8.14□□□□□ -1.11
PROM1-219ENST00000539194 XAGE2Q96GT9 111 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 TUBE1Q9UJT0 475 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 DENND2AQ9ULE3 1009 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 DUOX1Q9NRD9 1551 aa8.14□□□□□ -1.11
PROM1-219ENST00000539194 ZSCAN20P17040 1043 aaPredicted RBP8.14□□□□□ -1.11
PROM1-219ENST00000539194 CCAR1Q8IX12 1150 aaKnown RBP8.14□□□□□ -1.11
PROM1-219ENST00000539194 ELOA2Q8IYF1 753 aaPredicted RBP8.14□□□□□ -1.11
PROM1-219ENST00000539194 MORC2Q9Y6X9 1032 aaPredicted RBP8.14□□□□□ -1.11
PROM1-219ENST00000539194 YEATS4O95619 227 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 ZFYP08048 801 aaPredicted RBP8.13□□□□□ -1.11
PROM1-219ENST00000539194 ADD2P35612 726 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 KCNJ4P48050 445 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 TMX1Q9H3N1 280 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 CLIC4Q9Y696 253 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 AHDC1Q5TGY3 1603 aaPredicted RBP8.13□□□□□ -1.11
PROM1-219ENST00000539194 TAF1P21675 1872 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 CDK5RAP2Q96SN8 1893 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 USP27XA6NNY8 438 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 U2AF2P26368 475 aaKnown RBP eCLIP8.13□□□□□ -1.116e-6■■■■□ 22.5
PROM1-219ENST00000539194 NDUFA8P51970 172 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 MDM2Q00987 491 aaPredicted RBP8.13□□□□□ -1.11
PROM1-219ENST00000539194 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 STX1AQ16623 288 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 ATP2B3Q16720 1220 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 IGDCC4Q8TDY8 1250 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 APPBP2Q92624 585 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
PROM1-219ENST00000539194 DDX60LQ5H9U9 1706 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms