RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 Q6ZUG5 572 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
CDCA3-207ENST00000538862 BCL2L12Q9HB09 334 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 NARFQ9UHQ1 456 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
CDCA3-207ENST00000538862 TPM3P06753 285 aa17.14■□□□□ 0.33
CDCA3-207ENST00000538862 DDR1Q08345 913 aa17.14■□□□□ 0.33
CDCA3-207ENST00000538862 STK3Q13188 491 aa17.14■□□□□ 0.33
CDCA3-207ENST00000538862 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
CDCA3-207ENST00000538862 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
CDCA3-207ENST00000538862 LEO1Q8WVC0 666 aaPredicted RBP17.14■□□□□ 0.33
CDCA3-207ENST00000538862 ZSCAN16Q9H4T2 348 aaPredicted RBP17.14■□□□□ 0.33
CDCA3-207ENST00000538862 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
CDCA3-207ENST00000538862 CWC25Q9NXE8 425 aaPredicted RBP17.14■□□□□ 0.33
CDCA3-207ENST00000538862 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 IL6STP40189 918 aaPredicted RBP17.13■□□□□ 0.33
CDCA3-207ENST00000538862 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
CDCA3-207ENST00000538862 DDX46Q7L014 1031 aaKnown RBP17.13■□□□□ 0.33
CDCA3-207ENST00000538862 ATG9AQ7Z3C6 839 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 FAM200AQ8TCP9 573 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 SEC62Q99442 399 aaKnown RBP17.13■□□□□ 0.33
CDCA3-207ENST00000538862 DSCC1Q9BVC3 393 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 CD2APQ9Y5K6 639 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 PARP3Q9Y6F1 533 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 LIG1P18858 919 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 CCDC129Q6ZRS4 1044 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
CDCA3-207ENST00000538862 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
CDCA3-207ENST00000538862 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
CDCA3-207ENST00000538862 PDCL3Q9H2J4 239 aa17.12■□□□□ 0.33
CDCA3-207ENST00000538862 PAG1Q9NWQ8 432 aa17.12■□□□□ 0.33
CDCA3-207ENST00000538862 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 PFKFB2O60825 505 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 UQCRHP07919 91 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
CDCA3-207ENST00000538862 RESTQ13127 1097 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 GPR162Q16538 588 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 BICDL1Q6ZP65 573 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
CDCA3-207ENST00000538862 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
CDCA3-207ENST00000538862 SPEF2Q9C093 1822 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 JAK2O60674 1132 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 TYRO3Q06418 890 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 NFIXQ14938 502 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 NOLC1Q14978 699 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDCA3-207ENST00000538862 ZMYM1Q5SVZ6 1142 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 BRF1Q92994 677 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 CFAP45Q9UL16 551 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 CHMP3Q9Y3E7 222 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 MRVI1Q9Y6F6 885 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 LAMA4Q16363 1823 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 KIF13BQ9NQT8 1826 aa17.11■□□□□ 0.33
CDCA3-207ENST00000538862 H3BQV1 296 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 EYA2O00167 538 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
CDCA3-207ENST00000538862 CIAO1O76071 339 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 TM4SF1P30408 202 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDCA3-207ENST00000538862 NEUROD6Q96NK8 337 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
CDCA3-207ENST00000538862 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 GOLIM4O00461 696 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 AP5Z1O43299 807 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 CHGBP05060 677 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 EXOSC10Q01780 885 aaKnown RBP17.09■□□□□ 0.33
CDCA3-207ENST00000538862 SCRN1Q12765 414 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 NAA16Q6N069 864 aaPredicted RBP17.09■□□□□ 0.33
CDCA3-207ENST00000538862 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
CDCA3-207ENST00000538862 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
CDCA3-207ENST00000538862 SPTLC3Q9NUV7 552 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 BCORQ6W2J9 1755 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
CDCA3-207ENST00000538862 ZNF830Q96NB3 372 aaPredicted RBP17.09■□□□□ 0.33
CDCA3-207ENST00000538862 MAP7D2Q96T17 732 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 KIAA1551Q9HCM1 1747 aa17.09■□□□□ 0.33
CDCA3-207ENST00000538862 CAMTA2O94983 1202 aa17.08■□□□□ 0.33
CDCA3-207ENST00000538862 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.33
CDCA3-207ENST00000538862 PLCB2Q00722 1185 aa17.08■□□□□ 0.33
CDCA3-207ENST00000538862 CAMK4Q16566 473 aa17.08■□□□□ 0.33
CDCA3-207ENST00000538862 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.33
CDCA3-207ENST00000538862 PGBD1Q96JS3 809 aa17.08■□□□□ 0.33
CDCA3-207ENST00000538862 RNF113AO15541 343 aaKnown RBP17.08■□□□□ 0.32
CDCA3-207ENST00000538862 CAVIN2O95810 425 aa17.08■□□□□ 0.32
CDCA3-207ENST00000538862 TIMM10P62072 90 aa17.08■□□□□ 0.32
CDCA3-207ENST00000538862 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms