RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 MYOZ2Q9NPC6 264 aa17.05■□□□□ 0.32
CD9-208ENST00000538834 DDX19BQ9UMR2 479 aa17.05■□□□□ 0.32
CD9-208ENST00000538834 MYH2Q9UKX2 1941 aa17.04■□□□□ 0.32
CD9-208ENST00000538834 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
CD9-208ENST00000538834 BCAMP50895 628 aa17.04■□□□□ 0.32
CD9-208ENST00000538834 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
CD9-208ENST00000538834 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
CD9-208ENST00000538834 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
CD9-208ENST00000538834 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
CD9-208ENST00000538834 COL1A1P02452 1464 aaPredicted RBP17.04■□□□□ 0.32
CD9-208ENST00000538834 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
CD9-208ENST00000538834 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
CD9-208ENST00000538834 CST9Q5W186 159 aa17.03■□□□□ 0.32
CD9-208ENST00000538834 SIRT2Q8IXJ6 389 aa17.03■□□□□ 0.32
CD9-208ENST00000538834 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
CD9-208ENST00000538834 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
CD9-208ENST00000538834 CREBZFQ9NS37 354 aa17.03■□□□□ 0.32
CD9-208ENST00000538834 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.32
CD9-208ENST00000538834 WNT10BO00744 389 aa17.02■□□□□ 0.32
CD9-208ENST00000538834 SLC5A1P13866 664 aa17.02■□□□□ 0.32
CD9-208ENST00000538834 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.32
CD9-208ENST00000538834 TFCP2Q12800 502 aa17.02■□□□□ 0.32
CD9-208ENST00000538834 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
CD9-208ENST00000538834 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.32
CD9-208ENST00000538834 HTRA3P83110 453 aa17.01■□□□□ 0.31
CD9-208ENST00000538834 SCARF1Q14162 830 aa17.01■□□□□ 0.31
CD9-208ENST00000538834 RPAP2Q8IXW5 612 aaPredicted RBP17.01■□□□□ 0.31
CD9-208ENST00000538834 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
CD9-208ENST00000538834 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
CD9-208ENST00000538834 GLIS2Q9BZE0 524 aaPredicted RBP17.01■□□□□ 0.31
CD9-208ENST00000538834 PDS5AQ29RF7 1337 aaKnown RBP17■□□□□ 0.31
CD9-208ENST00000538834 TMEM88BA6NKF7 163 aa17■□□□□ 0.31
CD9-208ENST00000538834 TRAF5O00463 557 aa17■□□□□ 0.31
CD9-208ENST00000538834 TIMM10P62072 90 aa17■□□□□ 0.31
CD9-208ENST00000538834 GRIK5Q16478 980 aa17■□□□□ 0.31
CD9-208ENST00000538834 NBPF9Q3BBW0 867 aa17■□□□□ 0.31
CD9-208ENST00000538834 KIAA0825Q8IV33 1275 aa17■□□□□ 0.31
CD9-208ENST00000538834 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 A0A1B0GUL7 405 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 SEMA3EO15041 775 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 ADORA1P30542 326 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 PHKA1P46020 1223 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
CD9-208ENST00000538834 MFSD14BQ5SR56 506 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
CD9-208ENST00000538834 OGFOD1Q8N543 542 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 JMYQ8N9B5 988 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 TBC1D22AQ8WUA7 517 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
CD9-208ENST00000538834 SALL1Q9NSC2 1324 aa16.98■□□□□ 0.31
CD9-208ENST00000538834 LAMB1P07942 1786 aa16.98■□□□□ 0.31
CD9-208ENST00000538834 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
CD9-208ENST00000538834 CCDC102BQ68D86 513 aa16.98■□□□□ 0.31
CD9-208ENST00000538834 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
CD9-208ENST00000538834 XAGE2Q96GT9 111 aa16.98■□□□□ 0.31
CD9-208ENST00000538834 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
CD9-208ENST00000538834 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
CD9-208ENST00000538834 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
CD9-208ENST00000538834 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
CD9-208ENST00000538834 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
CD9-208ENST00000538834 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
CD9-208ENST00000538834 DLK2Q6UY11 383 aa16.97■□□□□ 0.31
CD9-208ENST00000538834 USP48Q86UV5 1035 aa16.97■□□□□ 0.31
CD9-208ENST00000538834 PRMT6Q96LA8 375 aaPredicted RBP16.97■□□□□ 0.31
CD9-208ENST00000538834 SERPINA10Q9UK55 444 aa16.97■□□□□ 0.31
CD9-208ENST00000538834 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
CD9-208ENST00000538834 JAG2Q9Y219 1238 aa16.97■□□□□ 0.31
CD9-208ENST00000538834 PCDHAC2Q9Y5I4 1007 aa16.97■□□□□ 0.31
CD9-208ENST00000538834 AOX1Q06278 1338 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
CD9-208ENST00000538834 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 ANGEL2Q5VTE6 544 aaKnown RBP16.96■□□□□ 0.31
CD9-208ENST00000538834 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 VPS37DQ86XT2 251 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 FBXW7Q969H0 707 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
CD9-208ENST00000538834 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
CD9-208ENST00000538834 CNTNAP1P78357 1384 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 CDK5RAP2Q96SN8 1893 aa16.96■□□□□ 0.31
CD9-208ENST00000538834 PAPPA2Q9BXP8 1791 aa16.95■□□□□ 0.3
CD9-208ENST00000538834 ARID4AP29374 1257 aaPredicted RBP16.95■□□□□ 0.3
CD9-208ENST00000538834 CFAP100Q494V2 611 aa16.95■□□□□ 0.3
CD9-208ENST00000538834 TNNI3KQ59H18 835 aa16.95■□□□□ 0.3
CD9-208ENST00000538834 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
CD9-208ENST00000538834 TLL2Q9Y6L7 1015 aa16.95■□□□□ 0.3
CD9-208ENST00000538834 FPGT-TNNI3KV9GXZ4 949 aa16.95■□□□□ 0.3
CD9-208ENST00000538834 ADM5C9JUS6 153 aa16.94■□□□□ 0.3
CD9-208ENST00000538834 RASGRF1Q13972 1273 aa16.94■□□□□ 0.3
CD9-208ENST00000538834 HHIPL1Q96JK4 782 aa16.94■□□□□ 0.3
CD9-208ENST00000538834 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
CD9-208ENST00000538834 DENND2AQ9ULE3 1009 aa16.94■□□□□ 0.3
CD9-208ENST00000538834 TTF2Q9UNY4 1162 aaKnown RBP16.94■□□□□ 0.3
CD9-208ENST00000538834 DLGAP5Q15398 846 aa16.93■□□□□ 0.3
CD9-208ENST00000538834 HHIPL2Q6UWX4 724 aa16.93■□□□□ 0.3
CD9-208ENST00000538834 SAPCD2Q86UD0 394 aa16.93■□□□□ 0.3
CD9-208ENST00000538834 EAF2Q96CJ1 260 aaPredicted RBP16.93■□□□□ 0.3
CD9-208ENST00000538834 GNL3LQ9NVN8 582 aaKnown RBP16.93■□□□□ 0.3
CD9-208ENST00000538834 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms