RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 EVI5LQ96CN4 794 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 PAG1Q9NWQ8 432 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 POLLQ9UGP5 575 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
CD4-208ENST00000538827 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
CD4-208ENST00000538827 HIBADHP31937 336 aaKnown RBP17.16■□□□□ 0.34
CD4-208ENST00000538827 ZAP70P43403 619 aa17.16■□□□□ 0.34
CD4-208ENST00000538827 RASGRF1Q13972 1273 aa17.16■□□□□ 0.34
CD4-208ENST00000538827 DALRD3Q5D0E6 543 aaKnown RBP17.16■□□□□ 0.34
CD4-208ENST00000538827 CASC1Q6TDU7 716 aa17.16■□□□□ 0.34
CD4-208ENST00000538827 PRDM10Q9NQV6 1147 aa17.16■□□□□ 0.34
CD4-208ENST00000538827 COL1A1P02452 1464 aaPredicted RBP17.16■□□□□ 0.34
CD4-208ENST00000538827 ARFGEF1Q9Y6D6 1849 aa17.16■□□□□ 0.34
CD4-208ENST00000538827 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
CD4-208ENST00000538827 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
CD4-208ENST00000538827 CC2D2BQ6DHV5 1058 aa17.15■□□□□ 0.34
CD4-208ENST00000538827 TXNRD3Q86VQ6 643 aa17.15■□□□□ 0.34
CD4-208ENST00000538827 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
CD4-208ENST00000538827 FAM84BQ96KN1 310 aaPredicted RBP17.15■□□□□ 0.34
CD4-208ENST00000538827 EYA3Q99504 573 aa17.15■□□□□ 0.34
CD4-208ENST00000538827 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
CD4-208ENST00000538827 VEGFAP15692 232 aaPredicted RBP17.14■□□□□ 0.33
CD4-208ENST00000538827 CHAF1AQ13111 956 aaPredicted RBP17.14■□□□□ 0.33
CD4-208ENST00000538827 TBC1D9Q6ZT07 1266 aa17.14■□□□□ 0.33
CD4-208ENST00000538827 SPATA5Q8NB90 893 aa17.14■□□□□ 0.33
CD4-208ENST00000538827 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
CD4-208ENST00000538827 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
CD4-208ENST00000538827 G3V3G9 751 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 DCAF8Q5TAQ9 597 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
CD4-208ENST00000538827 FBXO33Q7Z6M2 555 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 C7orf43Q8WVR3 580 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 FER1L6Q2WGJ9 1857 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
CD4-208ENST00000538827 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
CD4-208ENST00000538827 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
CD4-208ENST00000538827 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
CD4-208ENST00000538827 DENND2AQ9ULE3 1009 aa17.12■□□□□ 0.33
CD4-208ENST00000538827 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
CD4-208ENST00000538827 SEMA3EO15041 775 aa17.11■□□□□ 0.33
CD4-208ENST00000538827 TTF1Q15361 905 aaPredicted RBP17.11■□□□□ 0.33
CD4-208ENST00000538827 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
CD4-208ENST00000538827 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
CD4-208ENST00000538827 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
CD4-208ENST00000538827 FBXW7Q969H0 707 aa17.11■□□□□ 0.33
CD4-208ENST00000538827 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
CD4-208ENST00000538827 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
CD4-208ENST00000538827 CCDC88AQ3V6T2 1871 aa17.11■□□□□ 0.33
CD4-208ENST00000538827 HIP1O00291 1037 aa17.1■□□□□ 0.33
CD4-208ENST00000538827 CHMLP26374 656 aa17.1■□□□□ 0.33
CD4-208ENST00000538827 MFAP1P55081 439 aaKnown RBP17.1■□□□□ 0.33
CD4-208ENST00000538827 DOK7Q18PE1 504 aa17.1■□□□□ 0.33
CD4-208ENST00000538827 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
CD4-208ENST00000538827 CD209Q9NNX6 404 aa17.1■□□□□ 0.33
CD4-208ENST00000538827 GLTPD2A6NH11 291 aa17.09■□□□□ 0.33
CD4-208ENST00000538827 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
CD4-208ENST00000538827 IDH1O75874 414 aaKnown RBP17.09■□□□□ 0.33
CD4-208ENST00000538827 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
CD4-208ENST00000538827 AOC3Q16853 763 aa17.09■□□□□ 0.33
CD4-208ENST00000538827 RTFDC1Q9BY42 306 aaPredicted RBP17.09■□□□□ 0.33
CD4-208ENST00000538827 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
CD4-208ENST00000538827 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.32
CD4-208ENST00000538827 LRRFIP1Q32MZ4 808 aaKnown RBP17.08■□□□□ 0.32
CD4-208ENST00000538827 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.32
CD4-208ENST00000538827 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.32
CD4-208ENST00000538827 COA1Q9GZY4 146 aa17.08■□□□□ 0.32
CD4-208ENST00000538827 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
CD4-208ENST00000538827 CREBZFQ9NS37 354 aa17.08■□□□□ 0.32
CD4-208ENST00000538827 ABCF2Q9UG63 623 aa17.08■□□□□ 0.32
CD4-208ENST00000538827 PDS5AQ29RF7 1337 aaKnown RBP17.07■□□□□ 0.32
CD4-208ENST00000538827 FOXN1O15353 648 aa17.07■□□□□ 0.32
CD4-208ENST00000538827 CTCFP49711 727 aaPredicted RBP17.07■□□□□ 0.32
CD4-208ENST00000538827 RUFY2Q8WXA3 655 aa17.07■□□□□ 0.32
CD4-208ENST00000538827 PSMD1Q99460 953 aa17.07■□□□□ 0.32
CD4-208ENST00000538827 ESYT1Q9BSJ8 1104 aa17.07■□□□□ 0.32
CD4-208ENST00000538827 ZNF277Q9NRM2 450 aaPredicted RBP17.07■□□□□ 0.32
CD4-208ENST00000538827 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
CD4-208ENST00000538827 SCN9AQ15858 1988 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 PSME4Q14997 1843 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 ECE2O60344 883 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 IL1R1P14778 569 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 ZSCAN25Q6NSZ9 544 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 FAM227BQ96M60 508 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 TAOK3Q9H2K8 898 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
CD4-208ENST00000538827 RAI14Q9P0K7 980 aa17.06■□□□□ 0.32
CD4-208ENST00000538827 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
CD4-208ENST00000538827 RAD50Q92878 1312 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 A0A0D9SFI3 127 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 RNF113AO15541 343 aaKnown RBP17.05■□□□□ 0.32
CD4-208ENST00000538827 SEC24BO95487 1268 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 CHGBP05060 677 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 LMNB1P20700 586 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 RASSF7Q02833 373 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
CD4-208ENST00000538827 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms