RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 CHMP4BQ9H444 224 aaKnown RBP28.56■■■□□ 2.16
CLTA-209ENST00000538225 ZNF646O15015 1829 aaPredicted RBP28.55■■■□□ 2.16
CLTA-209ENST00000538225 SURF6O75683 361 aaKnown RBP28.55■■■□□ 2.16
CLTA-209ENST00000538225 APLP1P51693 650 aa28.55■■■□□ 2.16
CLTA-209ENST00000538225 MYOZ2Q9NPC6 264 aa28.55■■■□□ 2.16
CLTA-209ENST00000538225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.55■■■□□ 2.16
CLTA-209ENST00000538225 FAM205AQ6ZU69 1335 aa28.54■■■□□ 2.16
CLTA-209ENST00000538225 RRP1P56182 461 aaKnown RBP28.54■■■□□ 2.16
CLTA-209ENST00000538225 TIMM10P62072 90 aa28.54■■■□□ 2.16
CLTA-209ENST00000538225 OS9Q13438 667 aaPredicted RBP28.54■■■□□ 2.16
CLTA-209ENST00000538225 ZC3H15Q8WU90 426 aaKnown RBP28.54■■■□□ 2.16
CLTA-209ENST00000538225 PGAP2Q9UHJ9 254 aa28.54■■■□□ 2.16
CLTA-209ENST00000538225 F8W031 263 aaPredicted RBP28.53■■■□□ 2.16
CLTA-209ENST00000538225 HTRA3P83110 453 aa28.53■■■□□ 2.16
CLTA-209ENST00000538225 CHAF1AQ13111 956 aaPredicted RBP28.53■■■□□ 2.16
CLTA-209ENST00000538225 AKAP2Q9Y2D5 859 aa28.53■■■□□ 2.16
CLTA-209ENST00000538225 PASKQ96RG2 1323 aa28.52■■■□□ 2.16
CLTA-209ENST00000538225 ADORA1P30542 326 aa28.52■■■□□ 2.16
CLTA-209ENST00000538225 HDAC9Q9UKV0 1011 aa28.52■■■□□ 2.16
CLTA-209ENST00000538225 A0A1B0GUL7 405 aa28.51■■■□□ 2.15
CLTA-209ENST00000538225 FKBP1AP62942 108 aaKnown RBP28.51■■■□□ 2.15
CLTA-209ENST00000538225 SCARF1Q14162 830 aa28.51■■■□□ 2.15
CLTA-209ENST00000538225 MFSD14BQ5SR56 506 aa28.51■■■□□ 2.15
CLTA-209ENST00000538225 NEUROD6Q96NK8 337 aa28.51■■■□□ 2.15
CLTA-209ENST00000538225 ASTN2O75129 1339 aaPredicted RBP28.5■■■□□ 2.15
CLTA-209ENST00000538225 RPAP2Q8IXW5 612 aaPredicted RBP28.5■■■□□ 2.15
CLTA-209ENST00000538225 GLIS2Q9BZE0 524 aaPredicted RBP28.5■■■□□ 2.15
CLTA-209ENST00000538225 TRAF5O00463 557 aa28.49■■■□□ 2.15
CLTA-209ENST00000538225 FMR1Q06787 632 aaKnown RBP eCLIP28.49■■■□□ 2.15
CLTA-209ENST00000538225 NOP58Q9Y2X3 529 aaKnown RBP28.49■■■□□ 2.15
CLTA-209ENST00000538225 PHKA1P46020 1223 aa28.48■■■□□ 2.15
CLTA-209ENST00000538225 DCPSQ96C86 337 aaKnown RBP28.48■■■□□ 2.15
CLTA-209ENST00000538225 XAGE2Q96GT9 111 aa28.48■■■□□ 2.15
CLTA-209ENST00000538225 GNL3LQ9NVN8 582 aaKnown RBP28.48■■■□□ 2.15
CLTA-209ENST00000538225 MMP14P50281 582 aa28.47■■■□□ 2.15
CLTA-209ENST00000538225 NBPF9Q3BBW0 867 aa28.47■■■□□ 2.15
CLTA-209ENST00000538225 CDC37L1Q7L3B6 337 aa28.47■■■□□ 2.15
CLTA-209ENST00000538225 USP48Q86UV5 1035 aa28.47■■■□□ 2.15
CLTA-209ENST00000538225 SIRT2Q8IXJ6 389 aa28.47■■■□□ 2.15
CLTA-209ENST00000538225 GGA3Q9NZ52 723 aa28.47■■■□□ 2.15
CLTA-209ENST00000538225 ANGEL2Q5VTE6 544 aaKnown RBP28.46■■■□□ 2.15
CLTA-209ENST00000538225 CCDC102BQ68D86 513 aa28.46■■■□□ 2.15
CLTA-209ENST00000538225 EXOC6BQ9Y2D4 811 aa28.46■■■□□ 2.15
CLTA-209ENST00000538225 HMMRO75330 724 aa28.45■■■□□ 2.14
CLTA-209ENST00000538225 KRT26Q7Z3Y9 468 aa28.45■■■□□ 2.14
CLTA-209ENST00000538225 TBC1D22AQ8WUA7 517 aa28.45■■■□□ 2.14
CLTA-209ENST00000538225 WNT10BO00744 389 aa28.44■■■□□ 2.14
CLTA-209ENST00000538225 GRIK5Q16478 980 aa28.44■■■□□ 2.14
CLTA-209ENST00000538225 GORABQ5T7V8 394 aa28.44■■■□□ 2.14
CLTA-209ENST00000538225 DLK2Q6UY11 383 aa28.44■■■□□ 2.14
CLTA-209ENST00000538225 TTF2Q9UNY4 1162 aaKnown RBP28.44■■■□□ 2.14
CLTA-209ENST00000538225 DLGAP5Q15398 846 aa28.43■■■□□ 2.14
CLTA-209ENST00000538225 PCDHAC2Q9Y5I4 1007 aa28.43■■■□□ 2.14
CLTA-209ENST00000538225 TMEM88BA6NKF7 163 aa28.42■■■□□ 2.14
CLTA-209ENST00000538225 ADM5C9JUS6 153 aa28.42■■■□□ 2.14
CLTA-209ENST00000538225 RBM5P52756 815 aaKnown RBP eCLIP28.42■■■□□ 2.14
CLTA-209ENST00000538225 TNNI3KQ59H18 835 aa28.42■■■□□ 2.14
CLTA-209ENST00000538225 CREBZFQ9NS37 354 aa28.42■■■□□ 2.14
CLTA-209ENST00000538225 FPGT-TNNI3KV9GXZ4 949 aa28.42■■■□□ 2.14
CLTA-209ENST00000538225 CFAP100Q494V2 611 aa28.41■■■□□ 2.14
CLTA-209ENST00000538225 SULF1Q8IWU6 871 aa28.41■■■□□ 2.14
CLTA-209ENST00000538225 WDR66Q8TBY9 1149 aa28.41■■■□□ 2.14
CLTA-209ENST00000538225 GPR108Q9NPR9 543 aa28.41■■■□□ 2.14
CLTA-209ENST00000538225 DENND2AQ9ULE3 1009 aa28.41■■■□□ 2.14
CLTA-209ENST00000538225 SCAF8Q9UPN6 1271 aaKnown RBP28.41■■■□□ 2.14
CLTA-209ENST00000538225 ARAP2Q8WZ64 1704 aa28.4■■■□□ 2.14
CLTA-209ENST00000538225 COL1A1P02452 1464 aaPredicted RBP28.4■■■□□ 2.14
CLTA-209ENST00000538225 SEMA3EO15041 775 aa28.4■■■□□ 2.14
CLTA-209ENST00000538225 HSP90AB4PQ58FF6 505 aa28.4■■■□□ 2.14
CLTA-209ENST00000538225 ZBED3Q96IU2 234 aaPredicted RBP28.4■■■□□ 2.14
CLTA-209ENST00000538225 ZNF408Q9H9D4 720 aa28.4■■■□□ 2.14
CLTA-209ENST00000538225 APBB1O00213 710 aa28.39■■■□□ 2.14
CLTA-209ENST00000538225 CST9Q5W186 159 aa28.39■■■□□ 2.14
CLTA-209ENST00000538225 ERC1Q8IUD2 1116 aa28.39■■■□□ 2.14
CLTA-209ENST00000538225 MTMR14Q8NCE2 650 aa28.39■■■□□ 2.14
CLTA-209ENST00000538225 CRBNQ96SW2 442 aa28.39■■■□□ 2.14
CLTA-209ENST00000538225 RASGRF1Q13972 1273 aa28.38■■■□□ 2.13
CLTA-209ENST00000538225 PRMT6Q96LA8 375 aaPredicted RBP28.38■■■□□ 2.13
CLTA-209ENST00000538225 POLR2AP24928 1970 aaKnown RBP28.37■■■□□ 2.13
CLTA-209ENST00000538225 CELF2O95319 508 aaKnown RBP28.37■■■□□ 2.13
CLTA-209ENST00000538225 DNAJC5GQ8N7S2 189 aa28.37■■■□□ 2.13
CLTA-209ENST00000538225 DBNDD2Q9BQY9 259 aa28.37■■■□□ 2.13
CLTA-209ENST00000538225 SERPINA10Q9UK55 444 aa28.37■■■□□ 2.13
CLTA-209ENST00000538225 PITPNM2Q9BZ72 1349 aa28.37■■■□□ 2.13
CLTA-209ENST00000538225 SPDYE2BA6NHP3 402 aa28.36■■■□□ 2.13
CLTA-209ENST00000538225 SPDYE6P0CI01 402 aa28.36■■■□□ 2.13
CLTA-209ENST00000538225 CRKP46108 304 aa28.36■■■□□ 2.13
CLTA-209ENST00000538225 EAF2Q96CJ1 260 aaPredicted RBP28.36■■■□□ 2.13
CLTA-209ENST00000538225 CCDC8Q9H0W5 538 aaPredicted RBP28.36■■■□□ 2.13
CLTA-209ENST00000538225 SUGT1Q9Y2Z0 365 aa28.36■■■□□ 2.13
CLTA-209ENST00000538225 MYH13Q9UKX3 1938 aa28.35■■■□□ 2.13
CLTA-209ENST00000538225 RHPN1Q8TCX5 695 aa28.35■■■□□ 2.13
CLTA-209ENST00000538225 BCL11AQ9H165 835 aa28.35■■■□□ 2.13
CLTA-209ENST00000538225 IL1RAPL2Q9NP60 686 aa28.35■■■□□ 2.13
CLTA-209ENST00000538225 ABT1Q9ULW3 272 aaKnown RBP28.35■■■□□ 2.13
CLTA-209ENST00000538225 MYO1BO43795 1136 aa28.34■■■□□ 2.13
CLTA-209ENST00000538225 AOX1Q06278 1338 aa28.34■■■□□ 2.13
CLTA-209ENST00000538225 CLRN2A0PK11 232 aa28.33■■■□□ 2.13
CLTA-209ENST00000538225 ZBTB22O15209 634 aa28.33■■■□□ 2.13
CLTA-209ENST00000538225 CCDC158Q5M9N0 1113 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms