RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SEC24BO95487 1268 aa19■□□□□ 0.63
SFSWAP-206ENST00000537582 KBTBD3Q8NAB2 608 aa19■□□□□ 0.63
SFSWAP-206ENST00000537582 PSMD1Q99460 953 aa19■□□□□ 0.63
SFSWAP-206ENST00000537582 IL25Q9H293 177 aa19■□□□□ 0.63
SFSWAP-206ENST00000537582 IL1R1P14778 569 aa18.99■□□□□ 0.63
SFSWAP-206ENST00000537582 CHMLP26374 656 aa18.99■□□□□ 0.63
SFSWAP-206ENST00000537582 RASSF7Q02833 373 aa18.99■□□□□ 0.63
SFSWAP-206ENST00000537582 SOGA3Q5TF21 947 aa18.99■□□□□ 0.63
SFSWAP-206ENST00000537582 KCNQ5Q9NR82 932 aa18.99■□□□□ 0.63
SFSWAP-206ENST00000537582 DENND2AQ9ULE3 1009 aa18.99■□□□□ 0.63
SFSWAP-206ENST00000537582 AK9Q5TCS8 1911 aa18.99■□□□□ 0.63
SFSWAP-206ENST00000537582 PPIP5K2O43314 1243 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 PRELPP51888 382 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 KIAA2012Q0VF49 1180 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 BACH2Q9BYV9 841 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 COA1Q9GZY4 146 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 SEMA3EO15041 775 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 YBX3P16989 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 GRIK5Q16478 980 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 SUPT20HQ8NEM7 779 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 FAM227BQ96M60 508 aa18.98■□□□□ 0.63
SFSWAP-206ENST00000537582 FER1L6Q2WGJ9 1857 aa18.97■□□□□ 0.63
SFSWAP-206ENST00000537582 MYO5AQ9Y4I1 1855 aaKnown RBP18.97■□□□□ 0.63
SFSWAP-206ENST00000537582 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
SFSWAP-206ENST00000537582 IDH1O75874 414 aaKnown RBP18.97■□□□□ 0.63
SFSWAP-206ENST00000537582 GRIPAP1Q4V328 841 aa18.97■□□□□ 0.63
SFSWAP-206ENST00000537582 TAOK3Q9H2K8 898 aa18.97■□□□□ 0.63
SFSWAP-206ENST00000537582 ABCF2Q9UG63 623 aa18.97■□□□□ 0.63
SFSWAP-206ENST00000537582 CHD4Q14839 1912 aa18.96■□□□□ 0.63
SFSWAP-206ENST00000537582 MYH13Q9UKX3 1938 aa18.96■□□□□ 0.63
SFSWAP-206ENST00000537582 G3V3G9 751 aa18.96■□□□□ 0.63
SFSWAP-206ENST00000537582 ECE2O60344 883 aa18.96■□□□□ 0.63
SFSWAP-206ENST00000537582 NMIQ13287 307 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-206ENST00000537582 DCAF8Q5TAQ9 597 aa18.96■□□□□ 0.63
SFSWAP-206ENST00000537582 MXD3Q9BW11 206 aa18.96■□□□□ 0.63
SFSWAP-206ENST00000537582 A0A0D9SFI3 127 aa18.95■□□□□ 0.62
SFSWAP-206ENST00000537582 YDJCA8MPS7 323 aa18.95■□□□□ 0.62
SFSWAP-206ENST00000537582 GTF2IP78347 998 aa18.95■□□□□ 0.62
SFSWAP-206ENST00000537582 CWC27Q6UX04 472 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-206ENST00000537582 LARGE2Q8N3Y3 721 aa18.95■□□□□ 0.62
SFSWAP-206ENST00000537582 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
SFSWAP-206ENST00000537582 PDS5AQ29RF7 1337 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-206ENST00000537582 UTRNP46939 3433 aa18.94■□□□□ 0.62
SFSWAP-206ENST00000537582 PRDX5P30044 214 aa18.94■□□□□ 0.62
SFSWAP-206ENST00000537582 IARSP41252 1262 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-206ENST00000537582 TTF1Q15361 905 aaPredicted RBP18.94■□□□□ 0.62
SFSWAP-206ENST00000537582 SEC62Q99442 399 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-206ENST00000537582 DIAPH3Q9NSV4 1193 aa18.94■□□□□ 0.62
SFSWAP-206ENST00000537582 DOCK2Q92608 1830 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 ZNF384Q8TF68 577 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 ESYT1Q9BSJ8 1104 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 LRP2BPQ9P2M1 347 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 ZBTB22O15209 634 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 RNF113AO15541 343 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 PDE6AP16499 860 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 SLC9C2Q5TAH2 1124 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 CERS5Q8N5B7 392 aa18.93■□□□□ 0.62
SFSWAP-206ENST00000537582 RFX7Q2KHR2 1363 aa18.92■□□□□ 0.62
SFSWAP-206ENST00000537582 FAM205AQ6ZU69 1335 aa18.92■□□□□ 0.62
SFSWAP-206ENST00000537582 ADD2P35612 726 aa18.92■□□□□ 0.62
SFSWAP-206ENST00000537582 CCDC129Q6ZRS4 1044 aa18.92■□□□□ 0.62
SFSWAP-206ENST00000537582 PODNQ7Z5L7 613 aa18.92■□□□□ 0.62
SFSWAP-206ENST00000537582 MAGEB6Q8N7X4 407 aa18.92■□□□□ 0.62
SFSWAP-206ENST00000537582 RAI14Q9P0K7 980 aa18.92■□□□□ 0.62
SFSWAP-206ENST00000537582 ZNF532Q9HCE3 1301 aa18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 LTBP3Q9NS15 1303 aa18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 TCRBV5S4A2TA0A5A2 114 aa18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 MFAP1P55081 439 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 MFSD14BQ5SR56 506 aa18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 TTLL5Q6EMB2 1281 aa18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 ZNF589Q86UQ0 364 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 WDR66Q8TBY9 1149 aa18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 SALL1Q9NSC2 1324 aa18.91■□□□□ 0.62
SFSWAP-206ENST00000537582 M0R2C6 588 aa18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 MAP3K12Q12852 859 aa18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 ZMYM1Q5SVZ6 1142 aa18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 CASC1Q6TDU7 716 aa18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 ADGRA1Q86SQ6 560 aa18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 OSBP2Q969R2 916 aa18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 ZNF646O15015 1829 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-206ENST00000537582 SGSM2O43147 1006 aa18.89■□□□□ 0.62
SFSWAP-206ENST00000537582 RAD17O75943 681 aa18.89■□□□□ 0.62
SFSWAP-206ENST00000537582 MECOMQ03112 1051 aa18.89■□□□□ 0.62
SFSWAP-206ENST00000537582 NIM1KQ8IY84 436 aa18.89■□□□□ 0.62
SFSWAP-206ENST00000537582 MAST3O60307 1309 aa18.89■□□□□ 0.61
SFSWAP-206ENST00000537582 HIP1O00291 1037 aa18.89■□□□□ 0.61
SFSWAP-206ENST00000537582 DACT2Q5SW24 774 aa18.89■□□□□ 0.61
SFSWAP-206ENST00000537582 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
SFSWAP-206ENST00000537582 NSUN4Q96CB9 384 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-206ENST00000537582 PUS7LQ9H0K6 701 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-206ENST00000537582 MYH7P12883 1935 aa18.88■□□□□ 0.61
SFSWAP-206ENST00000537582 F8W031 263 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-206ENST00000537582 LDHBP07195 334 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-206ENST00000537582 VPS33BQ9H267 617 aa18.88■□□□□ 0.61
SFSWAP-206ENST00000537582 USP17L3A6NCW0 530 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 USP17L4A6NCW7 530 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 ZFYP08048 801 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms