RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CBFA2T2O43439 604 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 PPFIA2O75334 1257 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 SYF2O95926 243 aaKnown RBP9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 NPM1P06748 294 aaKnown RBP eCLIP9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 FAM173BQ6P4H8 233 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 TRIM74Q86UV6 250 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 TRIM73Q86UV7 250 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 KIFC2Q96AC6 838 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 ZSWIM4Q9H7M6 989 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 KAT14Q9H8E8 782 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 CDC23Q9UJX2 597 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 ANAPC4Q9UJX5 808 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 LRRIQ3A6PVS8 624 aaPredicted RBP9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 PARD3BQ8TEW8 1205 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 CENPHQ9H3R5 247 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 DUOX2Q9NRD8 1548 aa9.74□□□□□ -0.85
SRGAP1-202ENST00000537556 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 GOLGA6L7A0A1B0GV03 622 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 MAFGO15525 162 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 RASSF9O75901 435 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 VSNL1P62760 191 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 DCTN1Q14203 1278 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 NSD2O96028 1365 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 NUP153P49790 1475 aaKnown RBP9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 GLI2P10070 1586 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 GOLGA6CA6NDK9 693 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 IFIT2P09913 472 aaKnown RBP9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 GOLGA6DP0CG33 693 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 PEX19P40855 299 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 PIP4K2BP78356 416 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 CCT2P78371 535 aaKnown RBP9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 WDR93Q6P2C0 686 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 TLDC1Q6P9B6 456 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 GOLGA6AQ9NYA3 693 aa9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 PUF60Q9UHX1 559 aaKnown RBP9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.73□□□□□ -0.85
SRGAP1-202ENST00000537556 ARHGEF40Q8TER5 1519 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 FRMD3A2A2Y4 597 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 NDUFAB1O14561 156 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 LARGE1O95461 756 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 MAGEA8P43361 318 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 DRP2Q13474 957 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 CDCA2Q69YH5 1023 aaPredicted RBP9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 BRAPQ7Z569 592 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 ZBTB10Q96DT7 871 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 HOOK2Q96ED9 719 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 VCPKMTQ9H867 229 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 PTPRTO14522 1441 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 ACTN3Q08043 901 aaPredicted RBP9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 TBC1D25Q3MII6 688 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 SBNO2Q9Y2G9 1366 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 CTAGE15A4D2H0 777 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 STX10O60499 249 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 RHOXF2BP0C7M4 288 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 CTAGE8P0CG41 777 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 NAP1L1P55209 391 aaKnown RBP9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 IFFO1Q0D2I5 559 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 STIM1Q13586 685 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 TWISTNBQ3B726 338 aaPredicted RBP9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 C1QTNF12Q5T7M4 302 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 CTAGE6Q86UF2 777 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 CTAGE4Q8IX94 777 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 SPDYE1Q8NFV5 336 aaPredicted RBP9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 RHOXF2Q9BQY4 288 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 TM6SF1Q9BZW5 370 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 CDC42BPAQ5VT25 1732 aa9.72□□□□□ -0.85
SRGAP1-202ENST00000537556 SKAP2O75563 359 aaPredicted RBP9.71□□□□□ -0.85
SRGAP1-202ENST00000537556 RAB27AP51159 221 aa9.71□□□□□ -0.85
SRGAP1-202ENST00000537556 CCAR1Q8IX12 1150 aaKnown RBP9.71□□□□□ -0.85
SRGAP1-202ENST00000537556 PARP9Q8IXQ6 854 aa9.71□□□□□ -0.85
SRGAP1-202ENST00000537556 LMBR1Q8WVP7 490 aa9.71□□□□□ -0.85
SRGAP1-202ENST00000537556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.85
SRGAP1-202ENST00000537556 SALL3Q9BXA9 1300 aa9.71□□□□□ -0.86
SRGAP1-202ENST00000537556 TOP1P11387 765 aaKnown RBP9.71□□□□□ -0.86
SRGAP1-202ENST00000537556 GNGT1P63211 74 aa9.71□□□□□ -0.86
SRGAP1-202ENST00000537556 FANCCQ00597 558 aa9.71□□□□□ -0.86
SRGAP1-202ENST00000537556 USP32Q8NFA0 1604 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 CDKL5O76039 1030 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 RTN3O95197 1032 aaPredicted RBP9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 FAM160A1Q05DH4 1040 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 KCNB1Q14721 858 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 SLMAPQ14BN4 828 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 CAPRIN2Q6IMN6 1127 aaKnown RBP9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 NFXL1Q6ZNB6 911 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 OR8K1Q8NGG5 319 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 PAGR1Q9BTK6 254 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 STAP2Q9UGK3 403 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 HPCAL4Q9UM19 191 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 SAMM50Q9Y512 469 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 AOX1Q06278 1338 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 KIF5CO60282 957 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 AMPHP49418 695 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 ME3Q16798 604 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 HSP90AB2PQ58FF8 381 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 C3orf20Q8ND61 904 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms