RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 FRAT2O75474 233 aaPredicted RBP29.58■■■□□ 2.33
HMGA2-208ENST00000537429 JDP2Q8WYK2 163 aa29.58■■■□□ 2.33
HMGA2-208ENST00000537429 DENND2AQ9ULE3 1009 aa29.58■■■□□ 2.33
HMGA2-208ENST00000537429 NIM1KQ8IY84 436 aa29.57■■■□□ 2.32
HMGA2-208ENST00000537429 COL1A1P02452 1464 aaPredicted RBP29.57■■■□□ 2.32
HMGA2-208ENST00000537429 MYH13Q9UKX3 1938 aa29.57■■■□□ 2.32
HMGA2-208ENST00000537429 YDJCA8MPS7 323 aa29.56■■■□□ 2.32
HMGA2-208ENST00000537429 PI16Q6UXB8 463 aa29.56■■■□□ 2.32
HMGA2-208ENST00000537429 SPATA5Q8NB90 893 aa29.56■■■□□ 2.32
HMGA2-208ENST00000537429 HAUS7Q99871 368 aa29.56■■■□□ 2.32
HMGA2-208ENST00000537429 PDS5AQ29RF7 1337 aaKnown RBP29.56■■■□□ 2.32
HMGA2-208ENST00000537429 ZNRF3Q9ULT6 936 aa29.55■■■□□ 2.32
HMGA2-208ENST00000537429 DICER1Q9UPY3 1922 aaKnown RBP29.55■■■□□ 2.32
HMGA2-208ENST00000537429 KCNQ5Q9NR82 932 aa29.55■■■□□ 2.32
HMGA2-208ENST00000537429 SNRKQ9NRH2 765 aa29.55■■■□□ 2.32
HMGA2-208ENST00000537429 FAM205AQ6ZU69 1335 aa29.54■■■□□ 2.32
HMGA2-208ENST00000537429 SCN9AQ15858 1988 aa29.54■■■□□ 2.32
HMGA2-208ENST00000537429 ZAP70P43403 619 aa29.54■■■□□ 2.32
HMGA2-208ENST00000537429 RNF181Q9P0P0 153 aa29.54■■■□□ 2.32
HMGA2-208ENST00000537429 NDUFB9Q9Y6M9 179 aa29.54■■■□□ 2.32
HMGA2-208ENST00000537429 TTC22Q5TAA0 569 aa29.53■■■□□ 2.32
HMGA2-208ENST00000537429 GTF2IP78347 998 aa29.52■■■□□ 2.32
HMGA2-208ENST00000537429 DNAJC2Q99543 621 aaKnown RBP29.52■■■□□ 2.32
HMGA2-208ENST00000537429 CYP2E1P05181 493 aaPredicted RBP29.51■■■□□ 2.32
HMGA2-208ENST00000537429 GSPT1P15170 499 aaKnown RBP29.51■■■□□ 2.32
HMGA2-208ENST00000537429 CHAF1AQ13111 956 aaPredicted RBP29.51■■■□□ 2.32
HMGA2-208ENST00000537429 C9orf131Q5VYM1 1079 aa29.51■■■□□ 2.32
HMGA2-208ENST00000537429 TTLL5Q6EMB2 1281 aa29.51■■■□□ 2.32
HMGA2-208ENST00000537429 FBXW7Q969H0 707 aa29.51■■■□□ 2.32
HMGA2-208ENST00000537429 FZD9O00144 591 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 STRIP1Q5VSL9 837 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 JAG2Q9Y219 1238 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 PSME4Q14997 1843 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 USP17L3A6NCW0 530 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 USP17L4A6NCW7 530 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 USP17L1Q7RTZ2 530 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 WDR66Q8TBY9 1149 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 EDC3Q96F86 508 aaKnown RBP29.5■■■□□ 2.31
HMGA2-208ENST00000537429 PAG1Q9NWQ8 432 aa29.5■■■□□ 2.31
HMGA2-208ENST00000537429 ZNF646O15015 1829 aaPredicted RBP29.49■■■□□ 2.31
HMGA2-208ENST00000537429 ANTXR1Q9H6X2 564 aa29.49■■■□□ 2.31
HMGA2-208ENST00000537429 SALL1Q9NSC2 1324 aa29.49■■■□□ 2.31
HMGA2-208ENST00000537429 GOLIM4O00461 696 aa29.48■■■□□ 2.31
HMGA2-208ENST00000537429 MAP4K4O95819 1239 aaPredicted RBP29.48■■■□□ 2.31
HMGA2-208ENST00000537429 CXCL9Q07325 125 aa29.48■■■□□ 2.31
HMGA2-208ENST00000537429 RAD17O75943 681 aa29.47■■■□□ 2.31
HMGA2-208ENST00000537429 DACT2Q5SW24 774 aa29.47■■■□□ 2.31
HMGA2-208ENST00000537429 TBC1D22AQ8WUA7 517 aa29.47■■■□□ 2.31
HMGA2-208ENST00000537429 TBC1D9Q6ZT07 1266 aa29.46■■■□□ 2.31
HMGA2-208ENST00000537429 EIF6P56537 245 aaKnown RBP29.45■■■□□ 2.31
HMGA2-208ENST00000537429 FKBP1AP62942 108 aaKnown RBP29.45■■■□□ 2.31
HMGA2-208ENST00000537429 TTF1Q15361 905 aaPredicted RBP29.45■■■□□ 2.31
HMGA2-208ENST00000537429 BMP2KLQ5H9B9 411 aa29.45■■■□□ 2.31
HMGA2-208ENST00000537429 TIAM2Q8IVF5 1701 aa29.45■■■□□ 2.31
HMGA2-208ENST00000537429 VIL1P09327 827 aaKnown RBP29.45■■■□□ 2.3
HMGA2-208ENST00000537429 MFSD14BQ5SR56 506 aa29.45■■■□□ 2.3
HMGA2-208ENST00000537429 CIAPIN1Q6FI81 312 aa29.45■■■□□ 2.3
HMGA2-208ENST00000537429 EVI5LQ96CN4 794 aa29.45■■■□□ 2.3
HMGA2-208ENST00000537429 PIH1D3Q9NQM4 214 aaKnown RBP29.45■■■□□ 2.3
HMGA2-208ENST00000537429 TRIM6-TRIM34B2RNG4 842 aa29.44■■■□□ 2.3
HMGA2-208ENST00000537429 PSMD14O00487 310 aa29.44■■■□□ 2.3
HMGA2-208ENST00000537429 SDSP20132 328 aa29.44■■■□□ 2.3
HMGA2-208ENST00000537429 ZGPATQ8N5A5 531 aaKnown RBP29.44■■■□□ 2.3
HMGA2-208ENST00000537429 CERS5Q8N5B7 392 aa29.44■■■□□ 2.3
HMGA2-208ENST00000537429 ABCF2Q9UG63 623 aa29.44■■■□□ 2.3
HMGA2-208ENST00000537429 CNTROBQ8N137 903 aa29.43■■■□□ 2.3
HMGA2-208ENST00000537429 KBTBD3Q8NAB2 608 aa29.43■■■□□ 2.3
HMGA2-208ENST00000537429 MXD3Q9BW11 206 aa29.43■■■□□ 2.3
HMGA2-208ENST00000537429 TNIP1Q15025 636 aa29.42■■■□□ 2.3
HMGA2-208ENST00000537429 DOCK2Q92608 1830 aa29.42■■■□□ 2.3
HMGA2-208ENST00000537429 RILPL2Q969X0 211 aa29.42■■■□□ 2.3
HMGA2-208ENST00000537429 MYO5AQ9Y4I1 1855 aaKnown RBP29.42■■■□□ 2.3
HMGA2-208ENST00000537429 ZNF541Q9H0D2 1346 aa29.41■■■□□ 2.3
HMGA2-208ENST00000537429 PRDX5P30044 214 aa29.41■■■□□ 2.3
HMGA2-208ENST00000537429 RSBN1LQ6PCB5 846 aaPredicted RBP29.41■■■□□ 2.3
HMGA2-208ENST00000537429 ZC3H4Q9UPT8 1303 aaKnown RBP29.41■■■□□ 2.3
HMGA2-208ENST00000537429 GRIK5Q16478 980 aa29.4■■■□□ 2.3
HMGA2-208ENST00000537429 LRP2BPQ9P2M1 347 aa29.4■■■□□ 2.3
HMGA2-208ENST00000537429 SUGT1Q9Y2Z0 365 aa29.4■■■□□ 2.3
HMGA2-208ENST00000537429 SPTY2D1Q68D10 685 aaPredicted RBP29.4■■■□□ 2.3
HMGA2-208ENST00000537429 ERICH6Q7L0X2 663 aa29.4■■■□□ 2.3
HMGA2-208ENST00000537429 MYO3BQ8WXR4 1341 aa29.39■■■□□ 2.3
HMGA2-208ENST00000537429 GJA3Q9Y6H8 435 aa29.39■■■□□ 2.3
HMGA2-208ENST00000537429 IGSF3O75054 1194 aa29.38■■■□□ 2.29
HMGA2-208ENST00000537429 IDH1O75874 414 aaKnown RBP29.38■■■□□ 2.29
HMGA2-208ENST00000537429 LDHBP07195 334 aaKnown RBP29.38■■■□□ 2.29
HMGA2-208ENST00000537429 GMLQ99445 158 aa29.38■■■□□ 2.29
HMGA2-208ENST00000537429 AK9Q5TCS8 1911 aa29.38■■■□□ 2.29
HMGA2-208ENST00000537429 MAP3K12Q12852 859 aa29.37■■■□□ 2.29
HMGA2-208ENST00000537429 FSD1Q9BTV5 496 aa29.37■■■□□ 2.29
HMGA2-208ENST00000537429 ZBTB12Q9Y330 459 aaPredicted RBP29.37■■■□□ 2.29
HMGA2-208ENST00000537429 AGBL3Q8NEM8 1001 aa29.36■■■□□ 2.29
HMGA2-208ENST00000537429 RAI14Q9P0K7 980 aa29.36■■■□□ 2.29
HMGA2-208ENST00000537429 TICAM2Q86XR7 235 aa29.35■■■□□ 2.29
HMGA2-208ENST00000537429 GPC2Q8N158 579 aa29.35■■■□□ 2.29
HMGA2-208ENST00000537429 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.35■■■□□ 2.29
HMGA2-208ENST00000537429 MECOMQ03112 1051 aa29.35■■■□□ 2.29
HMGA2-208ENST00000537429 ZNF384Q8TF68 577 aa29.35■■■□□ 2.29
HMGA2-208ENST00000537429 NSUN4Q96CB9 384 aaKnown RBP29.35■■■□□ 2.29
HMGA2-208ENST00000537429 RPS12P25398 132 aaKnown RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms