RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 UQCRFS1P1P0C7P4 283 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 C20orf194Q5TEA3 1177 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 ZNF804AQ7Z570 1209 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 SMC5Q8IY18 1101 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 CWC22Q9HCG8 908 aaKnown RBP8.1□□□□□ -1.11
IFT88-207ENST00000537103 SEC31BQ9NQW1 1179 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 BCS1LQ9Y276 419 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 RFX7Q2KHR2 1363 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 NEFLP07196 543 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
IFT88-207ENST00000537103 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 GOPCQ9HD26 462 aa8.1□□□□□ -1.11
IFT88-207ENST00000537103 COL1A1P02452 1464 aaPredicted RBP8.09□□□□□ -1.11
IFT88-207ENST00000537103 PLIN1O60240 522 aa8.09□□□□□ -1.11
IFT88-207ENST00000537103 MNX1P50219 401 aaPredicted RBP8.09□□□□□ -1.11
IFT88-207ENST00000537103 TNIP1Q15025 636 aa8.09□□□□□ -1.11
IFT88-207ENST00000537103 GPR162Q16538 588 aa8.09□□□□□ -1.11
IFT88-207ENST00000537103 TBC1D22AQ8WUA7 517 aa8.09□□□□□ -1.11
IFT88-207ENST00000537103 L3MBTL3Q96JM7 780 aaPredicted RBP8.09□□□□□ -1.11
IFT88-207ENST00000537103 GNL3LQ9NVN8 582 aaKnown RBP8.09□□□□□ -1.11
IFT88-207ENST00000537103 PNMA6EA0A0J9YXQ4 647 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 C21orf2O43822 256 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 METTL24Q5JXM2 366 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 CERS3Q8IU89 383 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 SIRT2Q8IXJ6 389 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 RASEFQ8IZ41 740 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.12
IFT88-207ENST00000537103 CCDC102AQ96A19 550 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 ZNRF3Q9ULT6 936 aa8.09□□□□□ -1.12
IFT88-207ENST00000537103 ARID4AP29374 1257 aaPredicted RBP8.08□□□□□ -1.12
IFT88-207ENST00000537103 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
IFT88-207ENST00000537103 CAVIN4Q5BKX8 364 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 TTC41PQ6P2S7 1318 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 NIM1KQ8IY84 436 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 AGBL3Q8NEM8 1001 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 ZC3H12CQ9C0D7 883 aaKnown RBP8.08□□□□□ -1.12
IFT88-207ENST00000537103 MAST3O60307 1309 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 ATP2B3Q16720 1220 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 WASHC4Q2M389 1173 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 TDRD7Q8NHU6 1098 aaKnown RBP8.08□□□□□ -1.12
IFT88-207ENST00000537103 DPF2Q92785 391 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 PCMTD1Q96MG8 357 aaPredicted RBP8.08□□□□□ -1.12
IFT88-207ENST00000537103 CHMP3Q9Y3E7 222 aa8.08□□□□□ -1.12
IFT88-207ENST00000537103 UFL1O94874 794 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 STRIP1Q5VSL9 837 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 CENPQQ7L2Z9 268 aaPredicted RBP8.07□□□□□ -1.12
IFT88-207ENST00000537103 GPC2Q8N158 579 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 JDP2Q8WYK2 163 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 LRRCC1Q9C099 1032 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 DENND2AQ9ULE3 1009 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 ADAMTSL1Q8N6G6 1762 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 DOCK2Q92608 1830 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 GPR37O15354 613 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 SURF6O75683 361 aaKnown RBP8.07□□□□□ -1.12
IFT88-207ENST00000537103 KCNJ4P48050 445 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 EIF6P56537 245 aaKnown RBP8.07□□□□□ -1.12
IFT88-207ENST00000537103 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 CLASRPQ8N2M8 674 aaKnown RBP8.07□□□□□ -1.12
IFT88-207ENST00000537103 MTMR14Q8NCE2 650 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 RHPN1Q8TCX5 695 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 GPATCH3Q96I76 525 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 OSBPL3Q9H4L5 887 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 STAP2Q9UGK3 403 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 POLLQ9UGP5 575 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 FPGT-TNNI3KV9GXZ4 949 aa8.07□□□□□ -1.12
IFT88-207ENST00000537103 KDM2BQ8NHM5 1336 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 SASH1O94885 1247 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 VIL1P09327 827 aaKnown RBP8.06□□□□□ -1.12
IFT88-207ENST00000537103 ARHGAP27Q6ZUM4 889 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 WDR66Q8TBY9 1149 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 NSFL1CQ9UNZ2 370 aaKnown RBP8.06□□□□□ -1.12
IFT88-207ENST00000537103 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 PPIP5K2O43314 1243 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 HIBADHP31937 336 aaKnown RBP8.06□□□□□ -1.12
IFT88-207ENST00000537103 LRRC24Q50LG9 513 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 SPTY2D1Q68D10 685 aaPredicted RBP8.06□□□□□ -1.12
IFT88-207ENST00000537103 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 UBE2Q2Q8WVN8 375 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 JARID2Q92833 1246 aaPredicted RBP8.06□□□□□ -1.12
IFT88-207ENST00000537103 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
IFT88-207ENST00000537103 COL2A1P02458 1487 aaPredicted RBP8.06□□□□□ -1.12
IFT88-207ENST00000537103 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
IFT88-207ENST00000537103 EXOC6Q8TAG9 804 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 ECM29Q5VYK3 1845 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 SALL3Q9BXA9 1300 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 TAF1P21675 1872 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 ATP5JP18859 108 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 NUCB1Q02818 461 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 TTF1Q15361 905 aaPredicted RBP8.05□□□□□ -1.12
IFT88-207ENST00000537103 LRRFIP1Q32MZ4 808 aaKnown RBP8.05□□□□□ -1.12
IFT88-207ENST00000537103 CCDC158Q5M9N0 1113 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 DPY19L2Q6NUT2 758 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 LARGE2Q8N3Y3 721 aa8.05□□□□□ -1.12
IFT88-207ENST00000537103 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
IFT88-207ENST00000537103 FAM84BQ96KN1 310 aaPredicted RBP8.05□□□□□ -1.12
IFT88-207ENST00000537103 PUS3Q9BZE2 481 aaKnown RBP8.05□□□□□ -1.12
IFT88-207ENST00000537103 CD209Q9NNX6 404 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms