RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ECM29Q5VYK3 1845 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 FGAP02671 866 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 CLCN1P35523 988 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 HS1BP3Q53T59 392 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
UBE3B-207ENST00000537063 TTC6Q86TZ1 520 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 TAF1LQ8IZX4 1826 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 GPAA1O43292 621 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 PHKA1P46020 1223 aa11□□□□□ -0.65
UBE3B-207ENST00000537063 IMMTQ16891 758 aaKnown RBP11□□□□□ -0.65
UBE3B-207ENST00000537063 HSP90B1P14625 803 aaKnown RBP10.99□□□□□ -0.65
UBE3B-207ENST00000537063 PDIA3P30101 505 aaKnown RBP10.99□□□□□ -0.65
UBE3B-207ENST00000537063 HMGN5P82970 282 aaKnown RBP10.99□□□□□ -0.65
UBE3B-207ENST00000537063 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 CLEC4GQ6UXB4 293 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 LRRC2Q9BYS8 371 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 NBPF3Q9H094 633 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 VPS72Q15906 364 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 WASHC4Q2M389 1173 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
UBE3B-207ENST00000537063 ANP32BQ92688 251 aaKnown RBP10.99□□□□□ -0.65
UBE3B-207ENST00000537063 SCAND2PQ9GZW5 306 aaPredicted RBP10.99□□□□□ -0.65
UBE3B-207ENST00000537063 ZSCAN16Q9H4T2 348 aaPredicted RBP10.99□□□□□ -0.65
UBE3B-207ENST00000537063 HCLS1P14317 486 aaPredicted RBP10.98□□□□□ -0.65
UBE3B-207ENST00000537063 CCDC152Q4G0S7 254 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 RGS22Q8NE09 1264 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 ESPNB1AK53 854 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 SLC5A1P13866 664 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 ANTXR2P58335 489 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 ALX1Q15699 326 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 PTPDC1A2A3K4 754 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 PDE6AP16499 860 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 UVSSAQ2YD98 709 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 FERMT3Q86UX7 667 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 LINC00116Q8NCU8 138 aa10.98□□□□□ -0.65
UBE3B-207ENST00000537063 TOM1O60784 492 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 SLC9C2Q5TAH2 1124 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 SPATA5Q8NB90 893 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 LEO1Q8WVC0 666 aaPredicted RBP10.97□□□□□ -0.65
UBE3B-207ENST00000537063 SEC31BQ9NQW1 1179 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 KCNQ2O43526 872 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 ADD1P35611 737 aaKnown RBP10.97□□□□□ -0.65
UBE3B-207ENST00000537063 NIP7Q9Y221 180 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBE3B-207ENST00000537063 ZNF652Q9Y2D9 606 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 ZNF532Q9HCE3 1301 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 MCM5P33992 734 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 RASGRF1Q13972 1273 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 NCOA7Q8NI08 942 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 TRIM44Q96DX7 344 aaPredicted RBP10.97□□□□□ -0.65
UBE3B-207ENST00000537063 WWC3Q9ULE0 1092 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 CACNA1SQ13698 1873 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
UBE3B-207ENST00000537063 NUTM2BA6NNL0 878 aaPredicted RBP10.96□□□□□ -0.65
UBE3B-207ENST00000537063 NUTM2EB1AL46 878 aaPredicted RBP10.96□□□□□ -0.65
UBE3B-207ENST00000537063 RBM43Q6ZSC3 357 aaKnown RBP10.96□□□□□ -0.65
UBE3B-207ENST00000537063 NUTM2AQ8IVF1 878 aaPredicted RBP10.96□□□□□ -0.65
UBE3B-207ENST00000537063 KIF3AQ9Y496 699 aa10.96□□□□□ -0.65
UBE3B-207ENST00000537063 KIAA1551Q9HCM1 1747 aa10.96□□□□□ -0.65
UBE3B-207ENST00000537063 ZNF804BA4D1E1 1349 aa10.96□□□□□ -0.65
UBE3B-207ENST00000537063 MAST2Q6P0Q8 1798 aa10.96□□□□□ -0.65
UBE3B-207ENST00000537063 PRC1O43663 620 aa10.96□□□□□ -0.65
UBE3B-207ENST00000537063 FGD1P98174 961 aa10.96□□□□□ -0.65
UBE3B-207ENST00000537063 FAM173BQ6P4H8 233 aa10.96□□□□□ -0.65
UBE3B-207ENST00000537063 STRBPQ96SI9 672 aaKnown RBP10.96□□□□□ -0.65
UBE3B-207ENST00000537063 TAF1P21675 1872 aa10.96□□□□□ -0.66
UBE3B-207ENST00000537063 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.66
UBE3B-207ENST00000537063 ATL3Q6DD88 541 aa10.96□□□□□ -0.66
UBE3B-207ENST00000537063 FNBP4Q8N3X1 1017 aaPredicted RBP10.96□□□□□ -0.66
UBE3B-207ENST00000537063 ZNF213O14771 459 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 FDPSP14324 419 aaKnown RBP10.95□□□□□ -0.66
UBE3B-207ENST00000537063 TBC1D10CQ8IV04 446 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 SPATA32Q96LK8 384 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 MPHOSPH8Q99549 860 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 HAND2P61296 217 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 RC3H1Q5TC82 1133 aaKnown RBP10.95□□□□□ -0.66
UBE3B-207ENST00000537063 HELBQ8NG08 1087 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-207ENST00000537063 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 NCOA5Q9HCD5 579 aaKnown RBP10.95□□□□□ -0.66
UBE3B-207ENST00000537063 MYH13Q9UKX3 1938 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 PNPLA7Q6ZV29 1317 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 NID2Q14112 1375 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 IGHMBP2P38935 993 aaKnown RBP10.95□□□□□ -0.66
UBE3B-207ENST00000537063 SLC10A5Q5PT55 438 aa10.95□□□□□ -0.66
UBE3B-207ENST00000537063 GPHNQ9NQX3 736 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-207ENST00000537063 COL1A1P02452 1464 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-207ENST00000537063 H3BQV1 296 aa10.94□□□□□ -0.66
UBE3B-207ENST00000537063 IDH1O75874 414 aaKnown RBP10.94□□□□□ -0.66
UBE3B-207ENST00000537063 IFFO2Q5TF58 517 aa10.94□□□□□ -0.66
UBE3B-207ENST00000537063 CHST3Q7LGC8 479 aa10.94□□□□□ -0.66
UBE3B-207ENST00000537063 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
UBE3B-207ENST00000537063 PGBD1Q96JS3 809 aa10.94□□□□□ -0.66
UBE3B-207ENST00000537063 LIG1P18858 919 aa10.94□□□□□ -0.66
UBE3B-207ENST00000537063 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
UBE3B-207ENST00000537063 CHRNDQ07001 517 aa10.94□□□□□ -0.66
UBE3B-207ENST00000537063 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
UBE3B-207ENST00000537063 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms