RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 TMEM63CQ9P1W3 806 aa5.8□□□□□ -1.48
SKA3-207ENST00000536239 KANSL3Q9P2N6 904 aa5.8□□□□□ -1.48
SKA3-207ENST00000536239 FAM95CA0A1B0GW59 222 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 ACPPP15309 386 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 FAM69CQ0P6D2 419 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 C19orf57Q0VDD7 668 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 COL19A1Q14993 1142 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 NFKBIBQ15653 356 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 HGSNATQ68CP4 663 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 SMG8Q8ND04 991 aaKnown RBP5.79□□□□□ -1.48
SKA3-207ENST00000536239 MKNK1Q9BUB5 465 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 METTL22Q9BUU2 404 aaPredicted RBP5.79□□□□□ -1.48
SKA3-207ENST00000536239 SUGCTQ9HAC7 445 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 CNTN3Q9P232 1028 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 STIM2Q9P246 746 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 SOX13Q9UN79 622 aa5.79□□□□□ -1.48
SKA3-207ENST00000536239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.79□□□□□ -1.48
SKA3-207ENST00000536239 PDE2AO00408 941 aaPredicted RBP5.78□□□□□ -1.48
SKA3-207ENST00000536239 CYP26A1O43174 497 aa5.78□□□□□ -1.48
SKA3-207ENST00000536239 TIAF1O95411 115 aa5.78□□□□□ -1.48
SKA3-207ENST00000536239 PAOXQ6QHF9 649 aa5.78□□□□□ -1.48
SKA3-207ENST00000536239 CYP4F12Q9HCS2 524 aa5.78□□□□□ -1.48
SKA3-207ENST00000536239 DZANK1Q9NVP4 752 aa5.78□□□□□ -1.48
SKA3-207ENST00000536239 BSDC1Q9NW68 430 aaPredicted RBP5.78□□□□□ -1.48
SKA3-207ENST00000536239 CXXC1Q9P0U4 656 aaPredicted RBP5.78□□□□□ -1.48
SKA3-207ENST00000536239 SOX1O00570 391 aaPredicted RBP5.77□□□□□ -1.49
SKA3-207ENST00000536239 TRPA1O75762 1119 aa5.77□□□□□ -1.49
SKA3-207ENST00000536239 ZNF438Q7Z4V0 828 aa5.77□□□□□ -1.49
SKA3-207ENST00000536239 ABTB2Q8N961 1025 aa5.77□□□□□ -1.49
SKA3-207ENST00000536239 C1orf127Q8N9H9 656 aa5.77□□□□□ -1.49
SKA3-207ENST00000536239 NUDT16Q96DE0 195 aaKnown RBP5.77□□□□□ -1.49
SKA3-207ENST00000536239 ZMIZ1Q9ULJ6 1067 aa5.77□□□□□ -1.49
SKA3-207ENST00000536239 ADMP35318 185 aa5.76□□□□□ -1.49
SKA3-207ENST00000536239 USP11P51784 963 aa5.76□□□□□ -1.49
SKA3-207ENST00000536239 ELOAQ14241 798 aaKnown RBP5.76□□□□□ -1.49
SKA3-207ENST00000536239 CDPF1Q6NVV7 123 aa5.76□□□□□ -1.49
SKA3-207ENST00000536239 XKR5Q6UX68 686 aa5.76□□□□□ -1.49
SKA3-207ENST00000536239 AGBL5Q8NDL9 886 aa5.76□□□□□ -1.49
SKA3-207ENST00000536239 FBLIM1Q8WUP2 373 aa5.76□□□□□ -1.49
SKA3-207ENST00000536239 HHIPQ96QV1 700 aa5.76□□□□□ -1.49
SKA3-207ENST00000536239 LOC100289279A0A1B0GTE1 492 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 DLGAP3O95886 979 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 DRD2P14416 443 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 CES1P23141 567 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 EXOSC6Q5RKV6 272 aaKnown RBP5.75□□□□□ -1.49
SKA3-207ENST00000536239 ZAR1Q86SH2 424 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 TMEM102Q8N9M5 508 aaPredicted RBP5.75□□□□□ -1.49
SKA3-207ENST00000536239 TBC1D32Q96NH3 1257 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 USP26Q9BXU7 913 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 PRKAG2Q9UGJ0 569 aa5.75□□□□□ -1.49
SKA3-207ENST00000536239 RPLP1P05386 114 aaKnown RBP5.74□□□□□ -1.49
SKA3-207ENST00000536239 IKBKEQ14164 716 aa5.74□□□□□ -1.49
SKA3-207ENST00000536239 VN1R5Q7Z5H4 357 aa5.74□□□□□ -1.49
SKA3-207ENST00000536239 C2CD4AQ8NCU7 369 aaPredicted RBP5.74□□□□□ -1.49
SKA3-207ENST00000536239 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
SKA3-207ENST00000536239 BSNDQ8WZ55 320 aa5.74□□□□□ -1.49
SKA3-207ENST00000536239 EZH1Q92800 747 aaPredicted RBP5.74□□□□□ -1.49
SKA3-207ENST00000536239 NXPE3Q969Y0 559 aa5.74□□□□□ -1.49
SKA3-207ENST00000536239 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
SKA3-207ENST00000536239 PAK6Q9NQU5 681 aaPredicted RBP5.74□□□□□ -1.49
SKA3-207ENST00000536239 FAM170BA6NMN3 283 aa5.73□□□□□ -1.49
SKA3-207ENST00000536239 ATCAYQ86WG3 371 aa5.73□□□□□ -1.49
SKA3-207ENST00000536239 STK32AQ8WU08 396 aa5.73□□□□□ -1.49
SKA3-207ENST00000536239 GATA6Q92908 595 aa5.73□□□□□ -1.49
SKA3-207ENST00000536239 PMEPA1Q969W9 287 aa5.73□□□□□ -1.49
SKA3-207ENST00000536239 SOX17Q9H6I2 414 aaPredicted RBP5.73□□□□□ -1.49
SKA3-207ENST00000536239 PAPLNO95428 1278 aa5.72□□□□□ -1.49
SKA3-207ENST00000536239 SOX4Q06945 474 aaPredicted RBP5.72□□□□□ -1.49
SKA3-207ENST00000536239 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
SKA3-207ENST00000536239 OSMRQ99650 979 aa5.72□□□□□ -1.49
SKA3-207ENST00000536239 YIPF2Q9BWQ6 316 aa5.72□□□□□ -1.49
SKA3-207ENST00000536239 CHRDQ9H2X0 955 aa5.72□□□□□ -1.49
SKA3-207ENST00000536239 ZC3H7BQ9UGR2 993 aaKnown RBP5.72□□□□□ -1.49
SKA3-207ENST00000536239 ZNF648Q5T619 568 aaPredicted RBP5.71□□□□□ -1.5
SKA3-207ENST00000536239 DUSP27Q5VZP5 1158 aa5.71□□□□□ -1.5
SKA3-207ENST00000536239 ZKSCAN3Q9BRR0 538 aa5.71□□□□□ -1.5
SKA3-207ENST00000536239 GGNBP2Q9H3C7 697 aa5.71□□□□□ -1.5
SKA3-207ENST00000536239 EDEM1Q92611 657 aa5.7□□□□□ -1.5
SKA3-207ENST00000536239 LRRC4CQ9HCJ2 640 aa5.7□□□□□ -1.5
SKA3-207ENST00000536239 A6NHS1 94 aa5.69□□□□□ -1.5
SKA3-207ENST00000536239 ESRRAP11474 423 aaPredicted RBP5.69□□□□□ -1.5
SKA3-207ENST00000536239 PCSK2P16519 638 aa5.69□□□□□ -1.5
SKA3-207ENST00000536239 CYP27A1Q02318 531 aa5.69□□□□□ -1.5
SKA3-207ENST00000536239 GSTM4Q03013 218 aa5.69□□□□□ -1.5
SKA3-207ENST00000536239 DNM1Q05193 864 aaKnown RBP5.69□□□□□ -1.5
SKA3-207ENST00000536239 MAP7Q14244 749 aa5.69□□□□□ -1.5
SKA3-207ENST00000536239 C8orf34Q49A92 452 aa5.69□□□□□ -1.5
SKA3-207ENST00000536239 FBLN7Q53RD9 439 aa5.69□□□□□ -1.5
SKA3-207ENST00000536239 CLP1Q92989 425 aaKnown RBP5.69□□□□□ -1.5
SKA3-207ENST00000536239 ZNF777Q9ULD5 760 aaPredicted RBP5.69□□□□□ -1.5
SKA3-207ENST00000536239 DBX1A6NMT0 343 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 BIN1O00499 593 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 PDGFAP04085 211 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 NFICP08651 508 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 ADH5P11766 374 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 ZNF124Q15973 351 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 TMEM164Q5U3C3 297 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 ZNF765Q7L2R6 523 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 TTC16Q8NEE8 873 aa5.68□□□□□ -1.5
SKA3-207ENST00000536239 ASAP3Q8TDY4 903 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms