RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 PUS7LQ9H0K6 701 aaKnown RBP21.83■■□□□ 1.09
CHPF-203ENST00000535926 PI16Q6UXB8 463 aa21.83■■□□□ 1.08
CHPF-203ENST00000535926 FILIP1Q7Z7B0 1213 aa21.83■■□□□ 1.08
CHPF-203ENST00000535926 AOPEPQ8N6M6 819 aa21.83■■□□□ 1.08
CHPF-203ENST00000535926 MRPS27Q92552 414 aaKnown RBP21.83■■□□□ 1.08
CHPF-203ENST00000535926 PLEKHG2Q9H7P9 1386 aa21.83■■□□□ 1.08
CHPF-203ENST00000535926 PKD1L3Q7Z443 1732 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 SMTNL1A8MU46 457 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 NCBP1Q09161 790 aaKnown RBP21.82■■□□□ 1.08
CHPF-203ENST00000535926 CCDC158Q5M9N0 1113 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 TTC39AQ5SRH9 613 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 PRDM4Q9UKN5 801 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 ADAMTSL3P82987 1691 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 PRC1O43663 620 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 RBM6P78332 1123 aaKnown RBP21.82■■□□□ 1.08
CHPF-203ENST00000535926 NAA30Q147X3 362 aaPredicted RBP21.82■■□□□ 1.08
CHPF-203ENST00000535926 CCDC57Q2TAC2 916 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 GORABQ5T7V8 394 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 SDF4Q9BRK5 362 aa21.82■■□□□ 1.08
CHPF-203ENST00000535926 ZAP70P43403 619 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 ANTXR2P58335 489 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 MB21D2Q8IYB1 491 aaPredicted RBP21.81■■□□□ 1.08
CHPF-203ENST00000535926 KLF18A0A0U1RQI7 1052 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 ERVV-2B6SEH9 535 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 IMMTQ16891 758 aaKnown RBP21.81■■□□□ 1.08
CHPF-203ENST00000535926 FBXO18Q8NFZ0 1043 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 C8orf76Q96K31 380 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 ISCA1Q9BUE6 129 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 CTNNA3Q9UI47 895 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 TJP1Q07157 1748 aa21.81■■□□□ 1.08
CHPF-203ENST00000535926 SKILP12757 684 aa21.8■■□□□ 1.08
CHPF-203ENST00000535926 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
CHPF-203ENST00000535926 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
CHPF-203ENST00000535926 NEDD4P46934 1319 aa21.8■■□□□ 1.08
CHPF-203ENST00000535926 CEP57L1Q8IYX8 460 aa21.8■■□□□ 1.08
CHPF-203ENST00000535926 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 A0A1W2PQ27 194 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 A0A1W2PQ64 194 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 A0A1W2PQD8 194 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 SPDYE4A6NLX3 237 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 U2AF2P26368 475 aaKnown RBP eCLIP21.79■■□□□ 1.08
CHPF-203ENST00000535926 CCZ1BP86790 482 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 CCZ1P86791 482 aaPredicted RBP21.79■■□□□ 1.08
CHPF-203ENST00000535926 NKX2-3Q8TAU0 364 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 FAM89AQ96GI7 184 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 ORC3Q9UBD5 711 aaPredicted RBP21.79■■□□□ 1.08
CHPF-203ENST00000535926 DENND2AQ9ULE3 1009 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 MYH15Q9Y2K3 1946 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 LAMB4A4D0S4 1761 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 KIF28PB7ZC32 967 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 STK38Q15208 465 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 NBPF11Q86T75 865 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 ZNF330Q9Y3S2 320 aaPredicted RBP21.79■■□□□ 1.08
CHPF-203ENST00000535926 PAXBP1Q9Y5B6 917 aa21.79■■□□□ 1.08
CHPF-203ENST00000535926 GOLGA8BA8MQT2 603 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 TCIRG1Q13488 830 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 DPCR1Q3MIW9 517 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 TOM1L2Q6ZVM7 507 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 ZNF592Q92610 1267 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 KIAA1468Q9P260 1216 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 CPDO75976 1380 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 SF3A1Q15459 793 aaKnown RBP21.78■■□□□ 1.08
CHPF-203ENST00000535926 CEP135Q66GS9 1140 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 CHMP4CQ96CF2 233 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 KCPQ6ZWJ8 1503 aa21.78■■□□□ 1.08
CHPF-203ENST00000535926 NEMFO60524 1076 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 ZSCAN20P17040 1043 aaPredicted RBP21.77■■□□□ 1.08
CHPF-203ENST00000535926 MYSM1Q5VVJ2 828 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 SYNE4Q8N205 404 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 BCL11BQ9C0K0 894 aaPredicted RBP21.77■■□□□ 1.08
CHPF-203ENST00000535926 POLR3EQ9NVU0 708 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 AKAP2Q9Y2D5 859 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 NUP188Q5SRE5 1749 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 SPTLC2O15270 562 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 ZFYP08048 801 aaPredicted RBP21.77■■□□□ 1.08
CHPF-203ENST00000535926 CCDC112Q8NEF3 446 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 APPBP2Q92624 585 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 NWD2Q9ULI1 1742 aa21.77■■□□□ 1.08
CHPF-203ENST00000535926 TRMT1Q9NXH9 659 aaKnown RBP21.76■■□□□ 1.07
CHPF-203ENST00000535926 GPAA1O43292 621 aa21.76■■□□□ 1.07
CHPF-203ENST00000535926 NYAP1Q6ZVC0 841 aa21.76■■□□□ 1.07
CHPF-203ENST00000535926 NCOA7Q8NI08 942 aa21.76■■□□□ 1.07
CHPF-203ENST00000535926 KCNG4Q8TDN1 519 aa21.76■■□□□ 1.07
CHPF-203ENST00000535926 NAT10Q9H0A0 1025 aaKnown RBP21.76■■□□□ 1.07
CHPF-203ENST00000535926 ZNF213O14771 459 aa21.76■■□□□ 1.07
CHPF-203ENST00000535926 NKX1-1Q15270 411 aaPredicted RBP21.76■■□□□ 1.07
CHPF-203ENST00000535926 LRRFIP1Q32MZ4 808 aaKnown RBP21.76■■□□□ 1.07
CHPF-203ENST00000535926 NBPF3Q9H094 633 aa21.76■■□□□ 1.07
CHPF-203ENST00000535926 WDR17Q8IZU2 1322 aa21.75■■□□□ 1.07
CHPF-203ENST00000535926 BIN1O00499 593 aa21.75■■□□□ 1.07
CHPF-203ENST00000535926 DHX16O60231 1041 aaKnown RBP21.75■■□□□ 1.07
CHPF-203ENST00000535926 YEATS4O95619 227 aa21.75■■□□□ 1.07
CHPF-203ENST00000535926 AXDND1Q5T1B0 1012 aaPredicted RBP21.75■■□□□ 1.07
CHPF-203ENST00000535926 AIFM3Q96NN9 605 aa21.75■■□□□ 1.07
CHPF-203ENST00000535926 CPLX1O14810 134 aa21.75■■□□□ 1.07
CHPF-203ENST00000535926 ZNF202O95125 648 aa21.75■■□□□ 1.07
CHPF-203ENST00000535926 CSF1RP07333 972 aa21.74■■□□□ 1.07
CHPF-203ENST00000535926 KIF23Q02241 960 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms