RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 CD209Q9NNX6 404 aa16.26■□□□□ 0.19
CHFR-210ENST00000535527 TLR7Q9NYK1 1049 aaKnown RBP16.26■□□□□ 0.19
CHFR-210ENST00000535527 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
CHFR-210ENST00000535527 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
CHFR-210ENST00000535527 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
CHFR-210ENST00000535527 KCNJ4P48050 445 aa16.25■□□□□ 0.19
CHFR-210ENST00000535527 PUM3Q15397 648 aaKnown RBP16.25■□□□□ 0.19
CHFR-210ENST00000535527 ATP2B3Q16720 1220 aa16.25■□□□□ 0.19
CHFR-210ENST00000535527 CYP4F22Q6NT55 531 aa16.25■□□□□ 0.19
CHFR-210ENST00000535527 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
CHFR-210ENST00000535527 USP50Q70EL3 339 aaPredicted RBP16.25■□□□□ 0.19
CHFR-210ENST00000535527 FBXO33Q7Z6M2 555 aa16.25■□□□□ 0.19
CHFR-210ENST00000535527 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
CHFR-210ENST00000535527 CERS5Q8N5B7 392 aa16.25■□□□□ 0.19
CHFR-210ENST00000535527 IQSEC3Q9UPP2 1182 aaPredicted RBP16.25■□□□□ 0.19
CHFR-210ENST00000535527 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
CHFR-210ENST00000535527 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
CHFR-210ENST00000535527 PHKA1P46020 1223 aa16.24■□□□□ 0.19
CHFR-210ENST00000535527 BCAMP50895 628 aa16.24■□□□□ 0.19
CHFR-210ENST00000535527 TIMM10P62072 90 aa16.24■□□□□ 0.19
CHFR-210ENST00000535527 GRIK5Q16478 980 aa16.24■□□□□ 0.19
CHFR-210ENST00000535527 CST9Q5W186 159 aa16.24■□□□□ 0.19
CHFR-210ENST00000535527 GJA3Q9Y6H8 435 aa16.24■□□□□ 0.19
CHFR-210ENST00000535527 TRPM7Q96QT4 1865 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 EGFRP00533 1210 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 IL1R1P14778 569 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 GMPSP49915 693 aaPredicted RBP16.23■□□□□ 0.19
CHFR-210ENST00000535527 DACT2Q5SW24 774 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 CIAPIN1Q6FI81 312 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
CHFR-210ENST00000535527 HHIPL1Q96JK4 782 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 GMLQ99445 158 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 COA1Q9GZY4 146 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
CHFR-210ENST00000535527 TNNI3KQ59H18 835 aa16.22■□□□□ 0.19
CHFR-210ENST00000535527 LPIN2Q92539 896 aa16.22■□□□□ 0.19
CHFR-210ENST00000535527 EAF2Q96CJ1 260 aaPredicted RBP16.22■□□□□ 0.19
CHFR-210ENST00000535527 MCOLN1Q9GZU1 580 aa16.22■□□□□ 0.19
CHFR-210ENST00000535527 IL1RAPL2Q9NP60 686 aa16.22■□□□□ 0.19
CHFR-210ENST00000535527 FPGT-TNNI3KV9GXZ4 949 aa16.22■□□□□ 0.19
CHFR-210ENST00000535527 TNRC18O15417 2968 aaPredicted RBP16.22■□□□□ 0.19
CHFR-210ENST00000535527 APBB1O00213 710 aa16.21■□□□□ 0.19
CHFR-210ENST00000535527 VIL1P09327 827 aaKnown RBP16.21■□□□□ 0.19
CHFR-210ENST00000535527 EPS15P42566 896 aa16.21■□□□□ 0.19
CHFR-210ENST00000535527 GRM1Q13255 1194 aa16.21■□□□□ 0.19
CHFR-210ENST00000535527 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHFR-210ENST00000535527 SCARF1Q14162 830 aa16.21■□□□□ 0.19
CHFR-210ENST00000535527 XAGE2Q96GT9 111 aa16.21■□□□□ 0.19
CHFR-210ENST00000535527 DBNDD2Q9BQY9 259 aa16.21■□□□□ 0.19
CHFR-210ENST00000535527 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
CHFR-210ENST00000535527 AOX1Q06278 1338 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
CHFR-210ENST00000535527 IGHDP01880 384 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 SLC5A1P13866 664 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
CHFR-210ENST00000535527 GTF2IP78347 998 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 PODNQ7Z5L7 613 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 RHPN1Q8TCX5 695 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 TRPM4Q8TD43 1214 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 PCDHAC2Q9Y5I4 1007 aa16.2■□□□□ 0.18
CHFR-210ENST00000535527 MYH7P12883 1935 aa16.19■□□□□ 0.18
CHFR-210ENST00000535527 AOC2O75106 756 aa16.19■□□□□ 0.18
CHFR-210ENST00000535527 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
CHFR-210ENST00000535527 ZNF804AQ7Z570 1209 aa16.19■□□□□ 0.18
CHFR-210ENST00000535527 SAPCD2Q86UD0 394 aa16.19■□□□□ 0.18
CHFR-210ENST00000535527 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
CHFR-210ENST00000535527 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
CHFR-210ENST00000535527 GPRC5DQ9NZD1 345 aa16.19■□□□□ 0.18
CHFR-210ENST00000535527 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
CHFR-210ENST00000535527 USP17L3A6NCW0 530 aa16.18■□□□□ 0.18
CHFR-210ENST00000535527 USP17L4A6NCW7 530 aa16.18■□□□□ 0.18
CHFR-210ENST00000535527 IFIT1P09914 478 aaKnown RBP16.18■□□□□ 0.18
CHFR-210ENST00000535527 HIRAP54198 1017 aaPredicted RBP16.18■□□□□ 0.18
CHFR-210ENST00000535527 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
CHFR-210ENST00000535527 RASGRF1Q13972 1273 aa16.18■□□□□ 0.18
CHFR-210ENST00000535527 CCDC102BQ68D86 513 aa16.18■□□□□ 0.18
CHFR-210ENST00000535527 RSBN1LQ6PCB5 846 aaPredicted RBP16.18■□□□□ 0.18
CHFR-210ENST00000535527 USP17L1Q7RTZ2 530 aa16.18■□□□□ 0.18
CHFR-210ENST00000535527 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
CHFR-210ENST00000535527 ADARB2Q9NS39 739 aaKnown RBP16.18■□□□□ 0.18
CHFR-210ENST00000535527 TSKSQ9UJT2 592 aa16.18■□□□□ 0.18
CHFR-210ENST00000535527 ASTN2O75129 1339 aaPredicted RBP16.18■□□□□ 0.18
CHFR-210ENST00000535527 TRAF5O00463 557 aa16.17■□□□□ 0.18
CHFR-210ENST00000535527 STRIP1Q5VSL9 837 aa16.17■□□□□ 0.18
CHFR-210ENST00000535527 FBXW7Q969H0 707 aa16.17■□□□□ 0.18
CHFR-210ENST00000535527 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
CHFR-210ENST00000535527 HMMRO75330 724 aa16.16■□□□□ 0.18
CHFR-210ENST00000535527 DGKZQ13574 1117 aa16.16■□□□□ 0.18
CHFR-210ENST00000535527 MICALL2Q8IY33 904 aa16.16■□□□□ 0.18
CHFR-210ENST00000535527 OTUD7AQ8TE49 926 aaPredicted RBP16.16■□□□□ 0.18
CHFR-210ENST00000535527 PGAP2Q9UHJ9 254 aa16.16■□□□□ 0.18
CHFR-210ENST00000535527 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
CHFR-210ENST00000535527 CASP8AP2Q9UKL3 1982 aa16.16■□□□□ 0.18
CHFR-210ENST00000535527 PDE4DIPQ5VU43 2346 aa16.16■□□□□ 0.18
CHFR-210ENST00000535527 CELF2O95319 508 aaKnown RBP16.15■□□□□ 0.18
CHFR-210ENST00000535527 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms