RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CLCN6P51797 869 aa18.36■□□□□ 0.53
MCF2L-232ENST00000535094 JMYQ8N9B5 988 aa18.36■□□□□ 0.53
MCF2L-232ENST00000535094 CCDC12Q8WUD4 166 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-232ENST00000535094 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
MCF2L-232ENST00000535094 ZCCHC17Q9NP64 241 aaKnown RBP18.36■□□□□ 0.53
MCF2L-232ENST00000535094 USP31Q70CQ4 1352 aa18.36■□□□□ 0.53
MCF2L-232ENST00000535094 LMAN1P49257 510 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 PTPN12Q05209 780 aaKnown RBP18.35■□□□□ 0.53
MCF2L-232ENST00000535094 PLCD3Q8N3E9 789 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 NUP133Q8WUM0 1156 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 DESI2Q9BSY9 194 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 CBFA2T2O43439 604 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 PFKFB1P16118 471 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
MCF2L-232ENST00000535094 PUF60Q9UHX1 559 aaKnown RBP18.35■□□□□ 0.53
MCF2L-232ENST00000535094 ZNF827Q17R98 1081 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 ADALQ6DHV7 355 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 LLPHQ9BRT6 129 aaKnown RBP18.35■□□□□ 0.53
MCF2L-232ENST00000535094 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
MCF2L-232ENST00000535094 ADD1P35611 737 aaKnown RBP18.34■□□□□ 0.53
MCF2L-232ENST00000535094 ADKP55263 362 aaKnown RBP18.34■□□□□ 0.53
MCF2L-232ENST00000535094 LRRFIP1Q32MZ4 808 aaKnown RBP18.34■□□□□ 0.53
MCF2L-232ENST00000535094 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-232ENST00000535094 TSPOAP1O95153 1857 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
MCF2L-232ENST00000535094 CCP110O43303 1012 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 GYS2P54840 703 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 SAFBQ15424 915 aaKnown RBP eCLIP18.34■□□□□ 0.53
MCF2L-232ENST00000535094 MYSM1Q5VVJ2 828 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 ANO1Q5XXA6 986 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 A0A1B0GUL7 405 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 SLFN14P0C7P3 912 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 ARMCX5Q6P1M9 558 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 CABLES1Q8TDN4 633 aa18.34■□□□□ 0.53
MCF2L-232ENST00000535094 ZSCAN12O43309 604 aa18.33■□□□□ 0.53
MCF2L-232ENST00000535094 CDC25BP30305 580 aa18.33■□□□□ 0.53
MCF2L-232ENST00000535094 STX17P56962 302 aa18.33■□□□□ 0.53
MCF2L-232ENST00000535094 ETF1P62495 437 aaKnown RBP18.33■□□□□ 0.53
MCF2L-232ENST00000535094 MORC2Q9Y6X9 1032 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-232ENST00000535094 RNF113AO15541 343 aaKnown RBP18.33■□□□□ 0.52
MCF2L-232ENST00000535094 PHACTR2O75167 634 aa18.33■□□□□ 0.52
MCF2L-232ENST00000535094 CTDNEP1O95476 244 aa18.33■□□□□ 0.52
MCF2L-232ENST00000535094 METAP2P50579 478 aaKnown RBP eCLIP18.33■□□□□ 0.52
MCF2L-232ENST00000535094 NRKQ7Z2Y5 1582 aa18.33■□□□□ 0.52
MCF2L-232ENST00000535094 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.52
MCF2L-232ENST00000535094 HAUS7Q99871 368 aa18.33■□□□□ 0.52
MCF2L-232ENST00000535094 FANCLQ9NW38 375 aa18.33■□□□□ 0.52
MCF2L-232ENST00000535094 SARM1Q6SZW1 724 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 PI16Q6UXB8 463 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 SLC26A6Q9BXS9 759 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 CCDC102BQ68D86 513 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 LINC00301Q8NCQ3 95 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 RASSF8Q8NHQ8 419 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 NCOA7Q8NI08 942 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
MCF2L-232ENST00000535094 CARMIL3Q8ND23 1372 aa18.32■□□□□ 0.52
MCF2L-232ENST00000535094 NLRP12P59046 1061 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 RBM6P78332 1123 aaKnown RBP18.31■□□□□ 0.52
MCF2L-232ENST00000535094 MYL5Q02045 173 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 HOOK1Q9UJC3 728 aaKnown RBP18.31■□□□□ 0.52
MCF2L-232ENST00000535094 TMEM232C9JQI7 657 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 KIF4BQ2VIQ3 1234 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 PPFIBP1Q86W92 1011 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 FMR1NBQ8N0W7 255 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-232ENST00000535094 KCNB2Q92953 911 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 CCDC102AQ96A19 550 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
MCF2L-232ENST00000535094 AFMP43652 599 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 ARFGAP3Q9NP61 516 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 CNNM1Q9NRU3 951 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 TBX22Q9Y458 520 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 GPTP24298 496 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 SYCP1Q15431 976 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 NYAP1Q6ZVC0 841 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 DPF2Q92785 391 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
MCF2L-232ENST00000535094 COPRSQ9NQ92 184 aa18.3■□□□□ 0.52
MCF2L-232ENST00000535094 PNMA6AP0CW24 399 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-232ENST00000535094 AKAP17AQ02040 695 aaKnown RBP18.29■□□□□ 0.52
MCF2L-232ENST00000535094 IMPACTQ9P2X3 320 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 ZNF609O15014 1411 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 GOLGA8AA7E2F4 631 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 METTL24Q5JXM2 366 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 ZKSCAN3Q9BRR0 538 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 CWC25Q9NXE8 425 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-232ENST00000535094 M0R2C6 588 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 A1BGP04217 495 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 RBM43Q6ZSC3 357 aaKnown RBP18.29■□□□□ 0.52
MCF2L-232ENST00000535094 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 OSBP2Q969R2 916 aa18.29■□□□□ 0.52
MCF2L-232ENST00000535094 BAG1Q99933 345 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-232ENST00000535094 MAST3O60307 1309 aa18.28■□□□□ 0.52
MCF2L-232ENST00000535094 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
MCF2L-232ENST00000535094 B4E1Z4 1266 aa18.28■□□□□ 0.52
MCF2L-232ENST00000535094 FGAP02671 866 aa18.28■□□□□ 0.52
MCF2L-232ENST00000535094 KRBA2Q6ZNG9 492 aa18.28■□□□□ 0.52
MCF2L-232ENST00000535094 CMTR1Q8N1G2 835 aaKnown RBP18.28■□□□□ 0.52
MCF2L-232ENST00000535094 TRIM34Q9BYJ4 488 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms