RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 CFDP1Q9UEE9 299 aaPredicted RBP8.21□□□□□ -1.1
TNFRSF1A-206ENST00000535038 KDM5CP41229 1560 aa8.21□□□□□ -1.1
TNFRSF1A-206ENST00000535038 C9orf84Q5VXU9 1444 aa8.2□□□□□ -1.1
TNFRSF1A-206ENST00000535038 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
TNFRSF1A-206ENST00000535038 BCORL1Q5H9F3 1711 aa8.2□□□□□ -1.1
TNFRSF1A-206ENST00000535038 ARID3CA6NKF2 412 aa8.2□□□□□ -1.1
TNFRSF1A-206ENST00000535038 DLL1O00548 723 aa8.2□□□□□ -1.1
TNFRSF1A-206ENST00000535038 GDF6Q6KF10 455 aaPredicted RBP8.2□□□□□ -1.1
TNFRSF1A-206ENST00000535038 RALGAPBQ86X10 1494 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 UNC13BO14795 1591 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 HOXD8P13378 290 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 OCLNQ16625 522 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 C16orf46Q6P387 395 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 MEGF10Q96KG7 1140 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 SAP130Q9H0E3 1048 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 ZMIZ1Q9ULJ6 1067 aa8.19□□□□□ -1.1
TNFRSF1A-206ENST00000535038 PLXNC1O60486 1568 aa8.18□□□□□ -1.1
TNFRSF1A-206ENST00000535038 ELOAQ14241 798 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-206ENST00000535038 NLRP13Q86W25 1043 aa8.18□□□□□ -1.1
TNFRSF1A-206ENST00000535038 IL22RA1Q8N6P7 574 aa8.18□□□□□ -1.1
TNFRSF1A-206ENST00000535038 MRPL18Q9H0U6 180 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-206ENST00000535038 SRA1Q9HD15 236 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-206ENST00000535038 CCDC141Q6ZP82 1450 aa8.18□□□□□ -1.1
TNFRSF1A-206ENST00000535038 TRIP4Q15650 581 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 STK32AQ8WU08 396 aa8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 COL26A1Q96A83 441 aa8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 AKTIPQ9H8T0 292 aa8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 DHX29Q7Z478 1369 aaKnown RBP8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 MAGI2Q86UL8 1455 aa8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 CLASP1Q7Z460 1538 aa8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 ABCC2Q92887 1545 aa8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 TTC37Q6PGP7 1564 aa8.17□□□□□ -1.1
TNFRSF1A-206ENST00000535038 PLEKHD1A6NEE1 506 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 E9PCH4 1651 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 FAM69CQ0P6D2 419 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 KIF7Q2M1P5 1343 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 MAP4K3Q8IVH8 894 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 DCAF11Q8TEB1 546 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 MKNK1Q9BUB5 465 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 FAM13BQ9NYF5 915 aa8.16□□□□□ -1.1
TNFRSF1A-206ENST00000535038 IQGAP3Q86VI3 1631 aa8.15□□□□□ -1.1
TNFRSF1A-206ENST00000535038 UHRF1BP1LA0JNW5 1464 aa8.15□□□□□ -1.1
TNFRSF1A-206ENST00000535038 ARID4BQ4LE39 1312 aaPredicted RBP8.15□□□□□ -1.1
TNFRSF1A-206ENST00000535038 HYAL3O43820 417 aaPredicted RBP8.15□□□□□ -1.1
TNFRSF1A-206ENST00000535038 PRR23CQ6ZRP0 262 aa8.15□□□□□ -1.1
TNFRSF1A-206ENST00000535038 PIK3R5Q8WYR1 880 aa8.15□□□□□ -1.1
TNFRSF1A-206ENST00000535038 TRIM33Q9UPN9 1127 aa8.15□□□□□ -1.1
TNFRSF1A-206ENST00000535038 MYO5CQ9NQX4 1742 aa8.15□□□□□ -1.11
TNFRSF1A-206ENST00000535038 LAMC1P11047 1609 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ERCC6L2Q5T890 1561 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 FAM135AQ9P2D6 1515 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ALX3O95076 343 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 SETDB1Q15047 1291 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 FAM26DQ5JW98 314 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 DZIP1LQ8IYY4 767 aaKnown RBP8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 CACTIN-AS1Q8N1I8 211 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 TMEM130Q8N3G9 435 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 MUC3BQ9H195 1237 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 PRKRIP1Q9H875 184 aaPredicted RBP8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 CXXC1Q9P0U4 656 aaPredicted RBP8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 RNF112Q9ULX5 631 aa8.14□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ATP10AO60312 1499 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 PLA2R1Q13018 1463 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 TNFRSF10BO14763 440 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 CAPN12Q6ZSI9 719 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 OR13H1Q8NG92 308 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 TRPM1Q7Z4N2 1603 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 SYCP2Q9BX26 1530 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 PLEKHH2Q8IVE3 1493 aa8.13□□□□□ -1.11
TNFRSF1A-206ENST00000535038 NUP155O75694 1391 aa8.12□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ZAP70P43403 619 aa8.12□□□□□ -1.11
TNFRSF1A-206ENST00000535038 NAA30Q147X3 362 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF1A-206ENST00000535038 SPACA7Q96KW9 195 aa8.12□□□□□ -1.11
TNFRSF1A-206ENST00000535038 FNDC3AQ9Y2H6 1198 aaKnown RBP8.12□□□□□ -1.11
TNFRSF1A-206ENST00000535038 PPME1Q9Y570 386 aa8.12□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ARAP3Q8WWN8 1544 aa8.12□□□□□ -1.11
TNFRSF1A-206ENST00000535038 GPRASP1Q5JY77 1395 aa8.11□□□□□ -1.11
TNFRSF1A-206ENST00000535038 USP47Q96K76 1375 aa8.11□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ZCCHC11Q5TAX3 1644 aaKnown RBP8.11□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ATG7O95352 703 aa8.11□□□□□ -1.11
TNFRSF1A-206ENST00000535038 HYAL2Q12891 473 aa8.11□□□□□ -1.11
TNFRSF1A-206ENST00000535038 CCDC184Q52MB2 194 aa8.11□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ABCC1P33527 1531 aa8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 DUOX2Q9NRD8 1548 aa8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 GLB1P16278 677 aa8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 SRPK2P78362 688 aaKnown RBP8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 TMEM164Q5U3C3 297 aa8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 TTC39BQ5VTQ0 682 aaPredicted RBP8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 AGGF1Q8N302 714 aaeCLIP8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 GPR152Q8TDT2 470 aa8.1□□□□□ -1.11
TNFRSF1A-206ENST00000535038 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms