RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 SLC9C1Q4G0N8 1177 aa13.74□□□□□ -0.21
TNC-209ENST00000534839 NBPF11Q86T75 865 aa13.74□□□□□ -0.21
TNC-209ENST00000534839 DPF2Q92785 391 aa13.74□□□□□ -0.21
TNC-209ENST00000534839 SHISA4Q96DD7 197 aa13.74□□□□□ -0.21
TNC-209ENST00000534839 POLKQ9UBT6 870 aa13.74□□□□□ -0.21
TNC-209ENST00000534839 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
TNC-209ENST00000534839 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
TNC-209ENST00000534839 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
TNC-209ENST00000534839 CLEC4GQ6UXB4 293 aa13.73□□□□□ -0.21
TNC-209ENST00000534839 NPM2Q86SE8 214 aaKnown RBP13.73□□□□□ -0.21
TNC-209ENST00000534839 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
TNC-209ENST00000534839 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
TNC-209ENST00000534839 ABCC12Q96J65 1359 aa13.72□□□□□ -0.21
TNC-209ENST00000534839 RPTORQ8N122 1335 aa13.72□□□□□ -0.21
TNC-209ENST00000534839 TRIM66O15016 1216 aa13.72□□□□□ -0.21
TNC-209ENST00000534839 RNF40O75150 1001 aa13.72□□□□□ -0.21
TNC-209ENST00000534839 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
TNC-209ENST00000534839 MDM2Q00987 491 aaPredicted RBP13.72□□□□□ -0.21
TNC-209ENST00000534839 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
TNC-209ENST00000534839 REPIN1Q9BWE0 567 aaKnown RBP13.72□□□□□ -0.21
TNC-209ENST00000534839 PTCH2Q9Y6C5 1203 aa13.72□□□□□ -0.21
TNC-209ENST00000534839 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
TNC-209ENST00000534839 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.21
TNC-209ENST00000534839 KIAA2012Q0VF49 1180 aa13.71□□□□□ -0.21
TNC-209ENST00000534839 SUPT20HQ8NEM7 779 aa13.71□□□□□ -0.21
TNC-209ENST00000534839 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
TNC-209ENST00000534839 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
TNC-209ENST00000534839 RTFDC1Q9BY42 306 aaPredicted RBP13.71□□□□□ -0.21
TNC-209ENST00000534839 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.22
TNC-209ENST00000534839 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
TNC-209ENST00000534839 RNMTO43148 476 aaKnown RBP13.7□□□□□ -0.22
TNC-209ENST00000534839 KIF4BQ2VIQ3 1234 aa13.7□□□□□ -0.22
TNC-209ENST00000534839 UBE2Q1Q7Z7E8 422 aa13.7□□□□□ -0.22
TNC-209ENST00000534839 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
TNC-209ENST00000534839 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
TNC-209ENST00000534839 RIC1Q4ADV7 1423 aa13.7□□□□□ -0.22
TNC-209ENST00000534839 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
TNC-209ENST00000534839 PSMD14O00487 310 aa13.69□□□□□ -0.22
TNC-209ENST00000534839 SH3TC2Q8TF17 1288 aa13.69□□□□□ -0.22
TNC-209ENST00000534839 ZNF496Q96IT1 587 aaPredicted RBP13.69□□□□□ -0.22
TNC-209ENST00000534839 CRAMP1Q96RY5 1269 aa13.69□□□□□ -0.22
TNC-209ENST00000534839 DAXXQ9UER7 740 aaPredicted RBP13.69□□□□□ -0.22
TNC-209ENST00000534839 ZNF652Q9Y2D9 606 aa13.69□□□□□ -0.22
TNC-209ENST00000534839 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
TNC-209ENST00000534839 EYSQ5T1H1 3165 aa13.69□□□□□ -0.22
TNC-209ENST00000534839 TMEM265A0A087WTH1 108 aa13.68□□□□□ -0.22
TNC-209ENST00000534839 PIP4K2AP48426 406 aaPredicted RBP13.68□□□□□ -0.22
TNC-209ENST00000534839 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
TNC-209ENST00000534839 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
TNC-209ENST00000534839 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
TNC-209ENST00000534839 TMUB1Q9BVT8 246 aa13.68□□□□□ -0.22
TNC-209ENST00000534839 TEX13AQ9BXU3 409 aaPredicted RBP13.68□□□□□ -0.22
TNC-209ENST00000534839 IGF2BP3O00425 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
TNC-209ENST00000534839 PPP4CP60510 307 aa13.67□□□□□ -0.22
TNC-209ENST00000534839 SP3Q02447 781 aa13.67□□□□□ -0.22
TNC-209ENST00000534839 LRIT3Q3SXY7 679 aa13.67□□□□□ -0.22
TNC-209ENST00000534839 SLF2Q8IX21 1173 aa13.67□□□□□ -0.22
TNC-209ENST00000534839 TTC5Q8N0Z6 440 aa13.67□□□□□ -0.22
TNC-209ENST00000534839 RBM17Q96I25 401 aaKnown RBP13.67□□□□□ -0.22
TNC-209ENST00000534839 TESK2Q96S53 571 aa13.67□□□□□ -0.22
TNC-209ENST00000534839 SCAF8Q9UPN6 1271 aaKnown RBP13.67□□□□□ -0.22
TNC-209ENST00000534839 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
TNC-209ENST00000534839 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
TNC-209ENST00000534839 MAP3K12Q12852 859 aa13.66□□□□□ -0.22
TNC-209ENST00000534839 NEUROD1Q13562 356 aa13.66□□□□□ -0.22
TNC-209ENST00000534839 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
TNC-209ENST00000534839 AMHR2Q16671 573 aa13.66□□□□□ -0.22
TNC-209ENST00000534839 PRAMEF18Q5VWM3 479 aa13.66□□□□□ -0.22
TNC-209ENST00000534839 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
TNC-209ENST00000534839 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
TNC-209ENST00000534839 BMP8BP34820 402 aa13.65□□□□□ -0.22
TNC-209ENST00000534839 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
TNC-209ENST00000534839 CRHR2Q13324 411 aa13.65□□□□□ -0.22
TNC-209ENST00000534839 SPRYD7Q5W111 196 aa13.65□□□□□ -0.22
TNC-209ENST00000534839 GDF15Q99988 308 aa13.65□□□□□ -0.22
TNC-209ENST00000534839 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
TNC-209ENST00000534839 TMX4Q9H1E5 349 aaPredicted RBP13.65□□□□□ -0.22
TNC-209ENST00000534839 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
TNC-209ENST00000534839 RPS12P25398 132 aaKnown RBP13.64□□□□□ -0.23
TNC-209ENST00000534839 SCARF1Q14162 830 aa13.64□□□□□ -0.23
TNC-209ENST00000534839 MTFR1Q15390 333 aa13.64□□□□□ -0.23
TNC-209ENST00000534839 MANSC4A6NHS7 340 aaPredicted RBP13.63□□□□□ -0.23
TNC-209ENST00000534839 DDX11L8A8MPP1 907 aa13.63□□□□□ -0.23
TNC-209ENST00000534839 INHBEP58166 350 aa13.63□□□□□ -0.23
TNC-209ENST00000534839 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
TNC-209ENST00000534839 HLFQ16534 295 aa13.63□□□□□ -0.23
TNC-209ENST00000534839 SULT6B1Q6IMI4 303 aa13.63□□□□□ -0.23
TNC-209ENST00000534839 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
TNC-209ENST00000534839 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
TNC-209ENST00000534839 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
TNC-209ENST00000534839 IRS2Q9Y4H2 1338 aa13.62□□□□□ -0.23
TNC-209ENST00000534839 PDE4DQ08499 809 aa13.61□□□□□ -0.23
TNC-209ENST00000534839 PARP9Q8IXQ6 854 aa13.61□□□□□ -0.23
TNC-209ENST00000534839 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
TNC-209ENST00000534839 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
TNC-209ENST00000534839 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
TNC-209ENST00000534839 CLCN1P35523 988 aa13.6□□□□□ -0.23
TNC-209ENST00000534839 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
TNC-209ENST00000534839 FAM161BQ96MY7 647 aa13.6□□□□□ -0.23
TNC-209ENST00000534839 GJA8P48165 433 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms