RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 EPHX2P34913 555 aa11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 TTLL11Q8NHH1 800 aa11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 CDC5LQ99459 802 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 CXCL9Q07325 125 aa11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 KIAA2012Q0VF49 1180 aa11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 TBC1D16Q8TBP0 767 aa11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 EYA3Q99504 573 aa11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 VPS33BQ9H267 617 aa11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 GGA1Q9UJY5 639 aa11.31□□□□□ -0.6
CCDC90B-219ENST00000534753 ITGA6P23229 1130 aa11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 EPS15P42566 896 aa11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 CIAPIN1Q6FI81 312 aa11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 SSH1Q8WYL5 1049 aa11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 SRCIN1Q9C0H9 1055 aa11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
CCDC90B-219ENST00000534753 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 ECE2O60344 883 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 GMPSP49915 693 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 HNRNPUQ00839 825 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 TNIP1Q15025 636 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 MAP1SQ66K74 1059 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 PNMA8AQ86V59 439 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 MPHOSPH8Q99549 860 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 ZSWIM6Q9HCJ5 1215 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 SPEF2Q9C093 1822 aa11.29□□□□□ -0.6
CCDC90B-219ENST00000534753 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 ANKRD18BA2A2Z9 1011 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 GRM8O00222 908 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 COL9A1P20849 921 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 SCNN1DP51172 638 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 CASP7P55210 303 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 LRRC37AA6NMS7 1700 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 XDHP47989 1333 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 SCN4AP35499 1836 aa11.28□□□□□ -0.6
CCDC90B-219ENST00000534753 PSMD14O00487 310 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 PLIN1O60240 522 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 ALDH1L1O75891 902 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 KCNJ4P48050 445 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 FOXO4P98177 505 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 IFIT5Q13325 482 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 EPHA10Q5JZY3 1008 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 LMBR1LQ6UX01 489 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 ERICH6Q7L0X2 663 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 ZNF594Q96JF6 807 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 BSDC1Q9NW68 430 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 FAM198AQ9UFP1 575 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 MINPP1Q9UNW1 487 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 MYH3P11055 1940 aa11.27□□□□□ -0.61
CCDC90B-219ENST00000534753 SHTN1A0MZ66 631 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 CSF1RP07333 972 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 ATP2B4P23634 1241 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 CCDC57Q2TAC2 916 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 CNTROBQ8N137 903 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 PLA2G12BQ9BX93 195 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 GPRC5DQ9NZD1 345 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 PTPRCP08575 1304 aa11.26□□□□□ -0.61
CCDC90B-219ENST00000534753 H7C1D1 291 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 TAF5LO75529 589 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 NBPF7P0C2Y1 421 aaPredicted RBP11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 CLCN1P35523 988 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 CCT4P50991 539 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 ALDH1L2Q3SY69 923 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 TRMT2AQ8IZ69 625 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 TTC13Q8NBP0 860 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 RTL9Q8NET4 1388 aa11.25□□□□□ -0.61
CCDC90B-219ENST00000534753 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 PRSS12P56730 875 aa11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 FMR1Q06787 632 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 CHRNDQ07001 517 aa11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 TBC1D10BQ4KMP7 808 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 USP50Q70EL3 339 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms