RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 PNPLA6Q8IY17 1366 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 STAG2Q8N3U4 1231 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 ZNF280CQ8ND82 737 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 C2orf49Q9BVC5 232 aaPredicted RBP7.65□□□□□ -1.18
ATM-224ENST00000534625 ANKRD30BQ9BXX2 1392 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 STK26Q9P289 416 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 LRPPRCP42704 1394 aaKnown RBP7.64□□□□□ -1.19
ATM-224ENST00000534625 ABCC11Q96J66 1382 aa7.64□□□□□ -1.19
ATM-224ENST00000534625 AFF2P51816 1311 aa7.64□□□□□ -1.19
ATM-224ENST00000534625 LGR5O75473 907 aa7.64□□□□□ -1.19
ATM-224ENST00000534625 DPYDQ12882 1025 aa7.64□□□□□ -1.19
ATM-224ENST00000534625 SCG3Q8WXD2 468 aaKnown RBP7.64□□□□□ -1.19
ATM-224ENST00000534625 TRIM11Q96F44 468 aa7.64□□□□□ -1.19
ATM-224ENST00000534625 SLC30A3Q99726 388 aa7.64□□□□□ -1.19
ATM-224ENST00000534625 PRR12Q9ULL5 1215 aa7.64□□□□□ -1.19
ATM-224ENST00000534625 LAMC1P11047 1609 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 TECPR2O15040 1411 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 PIK3C2GO75747 1445 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 ACIN1Q9UKV3 1341 aaKnown RBP7.63□□□□□ -1.19
ATM-224ENST00000534625 RXRBP28702 533 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
ATM-224ENST00000534625 FOXD4L6Q3SYB3 417 aaPredicted RBP7.63□□□□□ -1.19
ATM-224ENST00000534625 CFAP70Q5T0N1 1121 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
ATM-224ENST00000534625 FOXD4L3Q6VB84 417 aaPredicted RBP7.63□□□□□ -1.19
ATM-224ENST00000534625 ALDH16A1Q8IZ83 802 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 GAS2L2Q8NHY3 880 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 SUSD3Q96L08 255 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 ARXQ96QS3 562 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 PLVAPQ9BX97 442 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 C14orf93Q9H972 538 aaKnown RBP7.63□□□□□ -1.19
ATM-224ENST00000534625 IFT172Q9UG01 1749 aa7.63□□□□□ -1.19
ATM-224ENST00000534625 RAB3GAP2Q9H2M9 1393 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 PLEKHH1Q9ULM0 1364 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 FAM196BA6NMK8 535 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L15C9J2P7 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L10C9JJH3 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L13C9JLJ4 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L12C9JPN9 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L11C9JVI0 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L21D6R901 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L18D6R9N7 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L22D6RA61 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L17D6RBQ6 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L19D6RCP7 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L20D6RJB6 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 USP17L24Q0WX57 530 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 RSPO4Q2I0M5 234 aaPredicted RBP7.62□□□□□ -1.19
ATM-224ENST00000534625 SYT9Q86SS6 491 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 C8orf37Q96NL8 207 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
ATM-224ENST00000534625 NEUROD4Q9HD90 331 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 CHMP3Q9Y3E7 222 aa7.62□□□□□ -1.19
ATM-224ENST00000534625 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
ATM-224ENST00000534625 SCO2A0A1W2PP80 73 aa7.61□□□□□ -1.19
ATM-224ENST00000534625 FOXO3O43524 673 aa7.61□□□□□ -1.19
ATM-224ENST00000534625 KCNQ4P56696 695 aa7.61□□□□□ -1.19
ATM-224ENST00000534625 TYRO3Q06418 890 aa7.61□□□□□ -1.19
ATM-224ENST00000534625 ANKMY2Q8IV38 441 aa7.61□□□□□ -1.19
ATM-224ENST00000534625 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
ATM-224ENST00000534625 NRXN1Q9ULB1 1477 aa7.61□□□□□ -1.19
ATM-224ENST00000534625 YTHDC2Q9H6S0 1430 aaKnown RBP7.61□□□□□ -1.19
ATM-224ENST00000534625 NPHP3Q7Z494 1330 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 CDC42BPGQ6DT37 1551 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 SIN3BO75182 1162 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 XPCQ01831 940 aaPredicted RBP7.6□□□□□ -1.19
ATM-224ENST00000534625 NGLY1Q96IV0 654 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 CEP63Q96MT8 703 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 HINFPQ9BQA5 517 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
ATM-224ENST00000534625 CDK12Q9NYV4 1490 aaPredicted RBP7.6□□□□□ -1.19
ATM-224ENST00000534625 ELOA3CA0A087WX78 387 aaPredicted RBP7.59□□□□□ -1.19
ATM-224ENST00000534625 ELOA3DA6NLF2 546 aaPredicted RBP7.59□□□□□ -1.19
ATM-224ENST00000534625 ADARB2-AS1A8MUL3 147 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 SPATA31C1P0DKV0 1188 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 IGFBP4P22692 258 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 RBM6P78332 1123 aaKnown RBP7.59□□□□□ -1.19
ATM-224ENST00000534625 ELOA3BQ3SY89 546 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 NKAPLQ5M9Q1 402 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 ELOA3Q8NG57 546 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 BCS1LQ9Y276 419 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 PXDNQ92626 1479 aa7.59□□□□□ -1.19
ATM-224ENST00000534625 DHX57Q6P158 1386 aaKnown RBP7.59□□□□□ -1.2
ATM-224ENST00000534625 KNDC1Q76NI1 1749 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 MYOM2P54296 1465 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 BTLAQ7Z6A9 289 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 RAB44Q7Z6P3 723 aaPredicted RBP7.58□□□□□ -1.2
ATM-224ENST00000534625 TNFRSF25Q93038 417 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 DMGDHQ9UI17 866 aaKnown RBP7.58□□□□□ -1.2
ATM-224ENST00000534625 USP21Q9UK80 565 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 KCNH4Q9UQ05 1017 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 STARD13Q9Y3M8 1113 aa7.58□□□□□ -1.2
ATM-224ENST00000534625 COL22A1Q8NFW1 1626 aaPredicted RBP7.57□□□□□ -1.2
ATM-224ENST00000534625 SAFB2Q14151 953 aaKnown RBP eCLIP7.57□□□□□ -1.2
ATM-224ENST00000534625 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
ATM-224ENST00000534625 KRT28Q7Z3Y7 464 aa7.57□□□□□ -1.2
ATM-224ENST00000534625 PRAM1Q96QH2 718 aa7.57□□□□□ -1.2
ATM-224ENST00000534625 KRTAP4-12Q9BQ66 201 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms