RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CDC37L1Q7L3B6 337 aa26.52■■□□□ 1.84
PKP3-211ENST00000534401 ARAP2Q8WZ64 1704 aa26.52■■□□□ 1.84
PKP3-211ENST00000534401 RBM26Q5T8P6 1007 aaKnown RBP26.51■■□□□ 1.83
PKP3-211ENST00000534401 OGFOD1Q8N543 542 aa26.51■■□□□ 1.83
PKP3-211ENST00000534401 MTMR14Q8NCE2 650 aa26.51■■□□□ 1.83
PKP3-211ENST00000534401 FBXW7Q969H0 707 aa26.51■■□□□ 1.83
PKP3-211ENST00000534401 ZBTB40Q9NUA8 1239 aa26.51■■□□□ 1.83
PKP3-211ENST00000534401 DDX19BQ9UMR2 479 aa26.51■■□□□ 1.83
PKP3-211ENST00000534401 NOP58Q9Y2X3 529 aaKnown RBP26.51■■□□□ 1.83
PKP3-211ENST00000534401 TMEM88BA6NKF7 163 aa26.5■■□□□ 1.83
PKP3-211ENST00000534401 FMR1Q06787 632 aaKnown RBP eCLIP26.5■■□□□ 1.833e-7■□□□□ 10.6
PKP3-211ENST00000534401 GLIS2Q9BZE0 524 aaPredicted RBP26.5■■□□□ 1.83
PKP3-211ENST00000534401 C1orf115Q9H7X2 142 aa26.5■■□□□ 1.83
PKP3-211ENST00000534401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.5■■□□□ 1.83
PKP3-211ENST00000534401 PITPNM2Q9BZ72 1349 aa26.49■■□□□ 1.83
PKP3-211ENST00000534401 TRAF5O00463 557 aa26.49■■□□□ 1.83
PKP3-211ENST00000534401 SCARF1Q14162 830 aa26.49■■□□□ 1.83
PKP3-211ENST00000534401 CST9Q5W186 159 aa26.49■■□□□ 1.83
PKP3-211ENST00000534401 CEP85Q6P2H3 762 aa26.49■■□□□ 1.83
PKP3-211ENST00000534401 KIAA0825Q8IV33 1275 aa26.49■■□□□ 1.83
PKP3-211ENST00000534401 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.49■■□□□ 1.83
PKP3-211ENST00000534401 COG6Q9Y2V7 657 aa26.49■■□□□ 1.83
PKP3-211ENST00000534401 ASTN2O75129 1339 aaPredicted RBP26.48■■□□□ 1.83
PKP3-211ENST00000534401 TFCP2Q12800 502 aa26.48■■□□□ 1.83
PKP3-211ENST00000534401 C20orf194Q5TEA3 1177 aa26.48■■□□□ 1.83
PKP3-211ENST00000534401 VPS37DQ86XT2 251 aa26.48■■□□□ 1.83
PKP3-211ENST00000534401 WNT10BO00744 389 aa26.47■■□□□ 1.83
PKP3-211ENST00000534401 KLRG1Q96E93 195 aa26.47■■□□□ 1.83
PKP3-211ENST00000534401 HDAC9Q9UKV0 1011 aa26.47■■□□□ 1.83
PKP3-211ENST00000534401 AKAP2Q9Y2D5 859 aa26.47■■□□□ 1.83
PKP3-211ENST00000534401 MYH13Q9UKX3 1938 aa26.46■■□□□ 1.83
PKP3-211ENST00000534401 G3BP1Q13283 466 aaKnown RBP eCLIP26.46■■□□□ 1.83
PKP3-211ENST00000534401 NBPF9Q3BBW0 867 aa26.46■■□□□ 1.83
PKP3-211ENST00000534401 MFSD14BQ5SR56 506 aa26.46■■□□□ 1.83
PKP3-211ENST00000534401 USP48Q86UV5 1035 aa26.46■■□□□ 1.83
PKP3-211ENST00000534401 DCPSQ96C86 337 aaKnown RBP26.46■■□□□ 1.83
PKP3-211ENST00000534401 GGA3Q9NZ52 723 aa26.46■■□□□ 1.83
PKP3-211ENST00000534401 KRT26Q7Z3Y9 468 aa26.45■■□□□ 1.82
PKP3-211ENST00000534401 TBC1D22AQ8WUA7 517 aa26.45■■□□□ 1.82
PKP3-211ENST00000534401 GPR108Q9NPR9 543 aa26.45■■□□□ 1.82
PKP3-211ENST00000534401 IQSEC3Q9UPP2 1182 aaPredicted RBP26.45■■□□□ 1.82
PKP3-211ENST00000534401 JAG2Q9Y219 1238 aa26.45■■□□□ 1.82
PKP3-211ENST00000534401 TIMM10P62072 90 aa26.44■■□□□ 1.82
PKP3-211ENST00000534401 CHMP4BQ9H444 224 aaKnown RBP26.44■■□□□ 1.82
PKP3-211ENST00000534401 SUGT1Q9Y2Z0 365 aa26.44■■□□□ 1.82
PKP3-211ENST00000534401 ECM29Q5VYK3 1845 aa26.44■■□□□ 1.82
PKP3-211ENST00000534401 A0A1B0GUL7 405 aa26.43■■□□□ 1.82
PKP3-211ENST00000534401 ADORA1P30542 326 aa26.43■■□□□ 1.82
PKP3-211ENST00000534401 ANGEL2Q5VTE6 544 aaKnown RBP26.43■■□□□ 1.82
PKP3-211ENST00000534401 RPAP2Q8IXW5 612 aaPredicted RBP26.43■■□□□ 1.82
PKP3-211ENST00000534401 JMYQ8N9B5 988 aa26.43■■□□□ 1.82
PKP3-211ENST00000534401 YTHDC1Q96MU7 727 aaKnown RBP26.43■■□□□ 1.82
PKP3-211ENST00000534401 MRIQ9BWK5 157 aa26.43■■□□□ 1.82
PKP3-211ENST00000534401 COL1A1P02452 1464 aaPredicted RBP26.42■■□□□ 1.82
PKP3-211ENST00000534401 SEMA3EO15041 775 aa26.42■■□□□ 1.82
PKP3-211ENST00000534401 PHKA1P46020 1223 aa26.42■■□□□ 1.82
PKP3-211ENST00000534401 GRIK5Q16478 980 aa26.42■■□□□ 1.82
PKP3-211ENST00000534401 RASSF10A6NK89 507 aa26.41■■□□□ 1.82
PKP3-211ENST00000534401 HDLBPQ00341 1268 aaKnown RBP26.41■■□□□ 1.82
PKP3-211ENST00000534401 CCDC102BQ68D86 513 aa26.41■■□□□ 1.82
PKP3-211ENST00000534401 SIRT2Q8IXJ6 389 aa26.41■■□□□ 1.82
PKP3-211ENST00000534401 XAGE2Q96GT9 111 aa26.41■■□□□ 1.82
PKP3-211ENST00000534401 SERPINA10Q9UK55 444 aa26.41■■□□□ 1.82
PKP3-211ENST00000534401 CNTNAP1P78357 1384 aa26.41■■□□□ 1.82
PKP3-211ENST00000534401 PDS5AQ29RF7 1337 aaKnown RBP26.4■■□□□ 1.82
PKP3-211ENST00000534401 SPDYE2BA6NHP3 402 aa26.4■■□□□ 1.82
PKP3-211ENST00000534401 ADM5C9JUS6 153 aa26.4■■□□□ 1.82
PKP3-211ENST00000534401 SURF6O75683 361 aaKnown RBP26.4■■□□□ 1.82
PKP3-211ENST00000534401 SPDYE6P0CI01 402 aa26.4■■□□□ 1.82
PKP3-211ENST00000534401 DLGAP5Q15398 846 aa26.4■■□□□ 1.82
PKP3-211ENST00000534401 DLK2Q6UY11 383 aa26.4■■□□□ 1.82
PKP3-211ENST00000534401 SULF1Q8IWU6 871 aa26.4■■□□□ 1.82
PKP3-211ENST00000534401 WDR66Q8TBY9 1149 aa26.4■■□□□ 1.82
PKP3-211ENST00000534401 GNL3LQ9NVN8 582 aaKnown RBP26.4■■□□□ 1.82
PKP3-211ENST00000534401 SALL1Q9NSC2 1324 aa26.39■■□□□ 1.82
PKP3-211ENST00000534401 FRAT2O75474 233 aaPredicted RBP26.39■■□□□ 1.82
PKP3-211ENST00000534401 CHAF1AQ13111 956 aaPredicted RBP26.39■■□□□ 1.82
PKP3-211ENST00000534401 CFAP100Q494V2 611 aa26.39■■□□□ 1.82
PKP3-211ENST00000534401 TTF2Q9UNY4 1162 aaKnown RBP26.39■■□□□ 1.82
PKP3-211ENST00000534401 PCDHAC2Q9Y5I4 1007 aa26.39■■□□□ 1.82
PKP3-211ENST00000534401 TLL2Q9Y6L7 1015 aa26.39■■□□□ 1.82
PKP3-211ENST00000534401 F8W031 263 aaPredicted RBP26.38■■□□□ 1.81
PKP3-211ENST00000534401 CELF2O95319 508 aaKnown RBP26.38■■□□□ 1.81
PKP3-211ENST00000534401 PRMT6Q96LA8 375 aaPredicted RBP26.38■■□□□ 1.81
PKP3-211ENST00000534401 DENND2AQ9ULE3 1009 aa26.38■■□□□ 1.81
PKP3-211ENST00000534401 HHIPL1Q96JK4 782 aa26.37■■□□□ 1.81
PKP3-211ENST00000534401 SAPCD2Q86UD0 394 aa26.36■■□□□ 1.81
PKP3-211ENST00000534401 AOX1Q06278 1338 aa26.36■■□□□ 1.81
PKP3-211ENST00000534401 RRP1P56182 461 aaKnown RBP26.35■■□□□ 1.81
PKP3-211ENST00000534401 TNNI3KQ59H18 835 aa26.35■■□□□ 1.81
PKP3-211ENST00000534401 CDCA5Q96FF9 252 aa26.35■■□□□ 1.81
PKP3-211ENST00000534401 FPGT-TNNI3KV9GXZ4 949 aa26.35■■□□□ 1.81
PKP3-211ENST00000534401 ARID4AP29374 1257 aaPredicted RBP26.34■■□□□ 1.81
PKP3-211ENST00000534401 CRKP46108 304 aa26.34■■□□□ 1.81
PKP3-211ENST00000534401 RASGRF1Q13972 1273 aa26.34■■□□□ 1.81
PKP3-211ENST00000534401 DEFB115Q30KQ5 88 aa26.34■■□□□ 1.81
PKP3-211ENST00000534401 APOBEC3FQ8IUX4 373 aaKnown RBP26.34■■□□□ 1.81
PKP3-211ENST00000534401 HHIPL2Q6UWX4 724 aa26.33■■□□□ 1.81
PKP3-211ENST00000534401 NEUROD6Q96NK8 337 aa26.33■■□□□ 1.81
PKP3-211ENST00000534401 MKRN1Q9UHC7 482 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms