RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 GRIA4P48058 902 aa7.26□□□□□ -1.25
ATPAF1-211ENST00000534216 KLHL23Q8NBE8 558 aa7.26□□□□□ -1.25
ATPAF1-211ENST00000534216 KLHDC7BQ96G42 594 aa7.26□□□□□ -1.25
ATPAF1-211ENST00000534216 A0A096LPE4 126 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 A0A1W2PPZ6 126 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 GADD45BO75293 160 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 CD68P34810 354 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 MAPK8P45983 427 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 IKBKEQ14164 716 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 SPRED3Q2MJR0 410 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 FOXD4L6Q3SYB3 417 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 FOXD4L3Q6VB84 417 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 TXNRD3Q86VQ6 643 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 HOMEZQ8IX15 550 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 OSGEPQ9NPF4 335 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 KCNK4Q9NYG8 393 aa7.25□□□□□ -1.25
ATPAF1-211ENST00000534216 SOX1O00570 391 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-211ENST00000534216 HGSNATQ68CP4 663 aa7.24□□□□□ -1.25
ATPAF1-211ENST00000534216 PRPF40BQ6NWY9 871 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-211ENST00000534216 PI16Q6UXB8 463 aa7.24□□□□□ -1.25
ATPAF1-211ENST00000534216 TMEM130Q8N3G9 435 aa7.24□□□□□ -1.25
ATPAF1-211ENST00000534216 WFDC12Q8WWY7 111 aa7.24□□□□□ -1.25
ATPAF1-211ENST00000534216 SLC7A3Q8WY07 619 aa7.24□□□□□ -1.25
ATPAF1-211ENST00000534216 ADAM11O75078 769 aa7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 ESRRAP11474 423 aaPredicted RBP7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 C19orf57Q0VDD7 668 aa7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 GRM2Q14416 872 aa7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 GLIS3Q8NEA6 775 aa7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 CLEC4MQ9H2X3 399 aaPredicted RBP7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 ABCB6Q9NP58 842 aa7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 NLRP2Q9NX02 1062 aa7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 TRAK1Q9UPV9 953 aa7.23□□□□□ -1.25
ATPAF1-211ENST00000534216 F8W735 103 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 DDX3YO15523 660 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 WISP1O95388 367 aa7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 P4HBP07237 508 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 ITPKAP23677 461 aa7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 NOS3P29474 1203 aa7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 IREB2P48200 963 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 ARL4DP49703 201 aa7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 FBF1Q8TES7 1133 aa7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 FOXD4L4Q8WXT5 416 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 SETDB2Q96T68 719 aa7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 SOX17Q9H6I2 414 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 AKTIPQ9H8T0 292 aa7.22□□□□□ -1.25
ATPAF1-211ENST00000534216 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 NLRP12P59046 1061 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 PCDH1Q08174 1060 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 DOC2BQ14184 412 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 ZNF423Q2M1K9 1284 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 ALG1LQ6GMV1 187 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 ZNF576Q9H609 170 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 TPSG1Q9NRR2 321 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 WWC3Q9ULE0 1092 aa7.21□□□□□ -1.26
ATPAF1-211ENST00000534216 ALX3O95076 343 aa7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 ATP2B2Q01814 1243 aa7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 PTPN12Q05209 780 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 COL19A1Q14993 1142 aa7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 DUOXA2Q1HG44 320 aa7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 DNAJC14Q6Y2X3 702 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 ACAD11Q709F0 780 aa7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 UBASH3BQ8TF42 649 aa7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 SSBP4Q9BWG4 385 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 BCO2Q9BYV7 579 aa7.2□□□□□ -1.26
ATPAF1-211ENST00000534216 NXPE4Q6UWF7 544 aa7.19□□□□□ -1.26
ATPAF1-211ENST00000534216 Q6ZS46 218 aa7.19□□□□□ -1.26
ATPAF1-211ENST00000534216 KIAA1211Q6ZU35 1233 aa7.19□□□□□ -1.26
ATPAF1-211ENST00000534216 AGGF1Q8N302 714 aaeCLIP7.19□□□□□ -1.26
ATPAF1-211ENST00000534216 MEGF10Q96KG7 1140 aa7.19□□□□□ -1.26
ATPAF1-211ENST00000534216 B3GALT4O96024 378 aa7.18□□□□□ -1.26
ATPAF1-211ENST00000534216 LDHBP07195 334 aaKnown RBP7.18□□□□□ -1.26
ATPAF1-211ENST00000534216 FURINP09958 794 aa7.18□□□□□ -1.26
ATPAF1-211ENST00000534216 CCDC27Q2M243 656 aa7.18□□□□□ -1.26
ATPAF1-211ENST00000534216 PPP4R2Q9NY27 417 aa7.18□□□□□ -1.26
ATPAF1-211ENST00000534216 EIF4EBP3O60516 100 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 FCGRTP55899 365 aa7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 GSTM4Q03013 218 aa7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 RPS26P11Q5JNZ5 115 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 DTHD1Q6ZMT9 781 aa7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 NPAS4Q8IUM7 802 aa7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 DZIP1LQ8IYY4 767 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 USP26Q9BXU7 913 aa7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 NRSN2Q9GZP1 204 aa7.17□□□□□ -1.26
ATPAF1-211ENST00000534216 ZBTB7CA1YPR0 619 aa7.16□□□□□ -1.26
ATPAF1-211ENST00000534216 XRCC5P13010 732 aaKnown RBP7.16□□□□□ -1.26
ATPAF1-211ENST00000534216 GLB1P16278 677 aa7.16□□□□□ -1.26
ATPAF1-211ENST00000534216 RSPO4Q2I0M5 234 aaPredicted RBP7.16□□□□□ -1.26
ATPAF1-211ENST00000534216 EAPPQ56P03 285 aaPredicted RBP7.16□□□□□ -1.26
ATPAF1-211ENST00000534216 NKAPLQ5M9Q1 402 aa7.16□□□□□ -1.26
ATPAF1-211ENST00000534216 OSBPL7Q9BZF2 842 aa7.16□□□□□ -1.26
ATPAF1-211ENST00000534216 LOC100289279A0A1B0GTE1 492 aa7.15□□□□□ -1.26
ATPAF1-211ENST00000534216 GIPC1O14908 333 aa7.15□□□□□ -1.26
ATPAF1-211ENST00000534216 PRPF40AO75400 957 aaKnown RBP7.15□□□□□ -1.26
ATPAF1-211ENST00000534216 FAAP100Q0VG06 881 aa7.15□□□□□ -1.26
ATPAF1-211ENST00000534216 TP53INP1Q96A56 240 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms