RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 NCAPD2Q15021 1401 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 TNS3Q68CZ2 1445 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 LTBP4Q8N2S1 1624 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 COL18A1P39060 1754 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.22
CHKA-208ENST00000533910 PPM1GO15355 546 aaPredicted RBP7.4□□□□□ -1.22
CHKA-208ENST00000533910 DHX9Q08211 1270 aaKnown RBP7.4□□□□□ -1.22
CHKA-208ENST00000533910 WDR63Q8IWG1 891 aa7.4□□□□□ -1.22
CHKA-208ENST00000533910 ABTB2Q8N961 1025 aa7.4□□□□□ -1.22
CHKA-208ENST00000533910 NPHP3Q7Z494 1330 aa7.4□□□□□ -1.22
CHKA-208ENST00000533910 RGPD2P0DJD1 1756 aa7.4□□□□□ -1.23
CHKA-208ENST00000533910 RGPD5Q99666 1765 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 IL16Q14005 1332 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 IGSF1Q8N6C5 1336 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 FOXO3O43524 673 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 IL2RAP01589 272 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 PRKAR2BP31323 418 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 TMPOP42166 694 aaKnown RBP7.39□□□□□ -1.23
CHKA-208ENST00000533910 SCARF1Q14162 830 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 HSP90AB2PQ58FF8 381 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 SLC9A9Q8IVB4 645 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 AGBL1Q96MI9 1066 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 EGFL7Q9UHF1 273 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 RCAN3Q9UKA8 241 aa7.39□□□□□ -1.23
CHKA-208ENST00000533910 BACH1O14867 736 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
CHKA-208ENST00000533910 IGFBP4P22692 258 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 MAPK1P28482 360 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 HOXC9P31274 260 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 RRP1P56182 461 aaKnown RBP7.38□□□□□ -1.23
CHKA-208ENST00000533910 WDR4P57081 412 aaKnown RBP7.38□□□□□ -1.23
CHKA-208ENST00000533910 ARHGAP4P98171 946 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 FKBP4Q02790 459 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHKA-208ENST00000533910 NR5A1Q13285 461 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 SH3PXD2AQ5TCZ1 1133 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 KRT28Q7Z3Y7 464 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 KDF1Q8NAX2 398 aaPredicted RBP7.38□□□□□ -1.23
CHKA-208ENST00000533910 KCNH5Q8NCM2 988 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 ZFP42Q96MM3 310 aa7.38□□□□□ -1.23
CHKA-208ENST00000533910 RRP7AQ9Y3A4 280 aaKnown RBP7.38□□□□□ -1.23
CHKA-208ENST00000533910 AHDC1Q5TGY3 1603 aaPredicted RBP7.38□□□□□ -1.23
CHKA-208ENST00000533910 HMOX1P09601 288 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 NFE2L2Q16236 605 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
CHKA-208ENST00000533910 CYP2U1Q7Z449 544 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 NPAS4Q8IUM7 802 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 IRF7Q92985 503 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 SLC4A9Q96Q91 983 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 PARP3Q9Y6F1 533 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 ROBO1Q9Y6N7 1651 aa7.37□□□□□ -1.23
CHKA-208ENST00000533910 COL22A1Q8NFW1 1626 aaPredicted RBP7.37□□□□□ -1.23
CHKA-208ENST00000533910 VIRMAQ69YN4 1812 aaKnown RBP7.36□□□□□ -1.23
CHKA-208ENST00000533910 SOS2Q07890 1332 aaPredicted RBP7.36□□□□□ -1.23
CHKA-208ENST00000533910 SPATA31A3Q5VYP0 1347 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 RBM47A0AV96 593 aaKnown RBP7.36□□□□□ -1.23
CHKA-208ENST00000533910 A6NJY4 79 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 IGSF3O75054 1194 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 GNRH1P01148 92 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 TIMP2P16035 220 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 MPSTP25325 297 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 AMPHP49418 695 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 SMTNP53814 917 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 FOXK2Q01167 660 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 XPCQ01831 940 aaPredicted RBP7.36□□□□□ -1.23
CHKA-208ENST00000533910 FAM26DQ5JW98 314 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 BRINP3Q76B58 766 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 ARHGEF25Q86VW2 580 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 GIPC2Q8TF65 315 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 IP6K1Q92551 441 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 NGLY1Q96IV0 654 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 PHACTR3Q96KR7 559 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 BCL2L13Q9BXK5 485 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 ZFAND3Q9H8U3 227 aa7.36□□□□□ -1.23
CHKA-208ENST00000533910 SCHIP1Q9P0W5 487 aaPredicted RBP7.36□□□□□ -1.23
CHKA-208ENST00000533910 CPDO75976 1380 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 ADAMTS7Q9UKP4 1686 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 FANCIQ9NVI1 1328 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 FAM181BA6NEQ2 426 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
CHKA-208ENST00000533910 GCP02774 474 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 NEFMP07197 916 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 ZNF16P17020 682 aaPredicted RBP7.35□□□□□ -1.23
CHKA-208ENST00000533910 RIPK4P57078 832 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 LMOD3Q0VAK6 560 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 COX20Q5RI15 118 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 SULT6B1Q6IMI4 303 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 HELQQ8TDG4 1101 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 CNKSR1Q969H4 720 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 ITPKCQ96DU7 683 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 MYH16Q9H6N6 1097 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 ZNF395Q9H8N7 513 aaPredicted RBP7.35□□□□□ -1.23
CHKA-208ENST00000533910 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
CHKA-208ENST00000533910 KIAA1522Q9P206 1035 aaPredicted RBP7.35□□□□□ -1.23
CHKA-208ENST00000533910 PLEKHG2Q9H7P9 1386 aa7.34□□□□□ -1.23
CHKA-208ENST00000533910 CT47B1P0C2W7 299 aaPredicted RBP7.34□□□□□ -1.23
CHKA-208ENST00000533910 IRX6P78412 446 aaPredicted RBP7.34□□□□□ -1.23
CHKA-208ENST00000533910 TLR1Q15399 786 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms