RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 HHIPL1Q96JK4 782 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 RCAN3Q9UKA8 241 aa12.25□□□□□ -0.45
NUP98-220ENST00000533346 RASSF10A6NK89 507 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 GYG1P46976 350 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 PDE3AQ14432 1141 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 TBC1D10BQ4KMP7 808 aaPredicted RBP12.24□□□□□ -0.45
NUP98-220ENST00000533346 CST9Q5W186 159 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 CERS5Q8N5B7 392 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
NUP98-220ENST00000533346 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
NUP98-220ENST00000533346 WNT10BO00744 389 aa12.23□□□□□ -0.45
NUP98-220ENST00000533346 SLC5A1P13866 664 aa12.23□□□□□ -0.45
NUP98-220ENST00000533346 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
NUP98-220ENST00000533346 SCARF1Q14162 830 aa12.23□□□□□ -0.45
NUP98-220ENST00000533346 TBC1D22AQ8WUA7 517 aa12.23□□□□□ -0.45
NUP98-220ENST00000533346 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
NUP98-220ENST00000533346 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
NUP98-220ENST00000533346 NOP58Q9Y2X3 529 aaKnown RBP12.23□□□□□ -0.45
NUP98-220ENST00000533346 PDS5AQ29RF7 1337 aaKnown RBP12.22□□□□□ -0.45
NUP98-220ENST00000533346 PNMA6EA0A0J9YXQ4 647 aa12.22□□□□□ -0.45
NUP98-220ENST00000533346 SEMA3EO15041 775 aa12.22□□□□□ -0.45
NUP98-220ENST00000533346 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
NUP98-220ENST00000533346 GLIS2Q9BZE0 524 aaPredicted RBP12.22□□□□□ -0.45
NUP98-220ENST00000533346 GPR108Q9NPR9 543 aa12.22□□□□□ -0.45
NUP98-220ENST00000533346 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
NUP98-220ENST00000533346 PA2G4Q9UQ80 394 aaKnown RBP12.22□□□□□ -0.45
NUP98-220ENST00000533346 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
NUP98-220ENST00000533346 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
NUP98-220ENST00000533346 COL1A1P02452 1464 aaPredicted RBP12.21□□□□□ -0.45
NUP98-220ENST00000533346 SALL1Q9NSC2 1324 aa12.21□□□□□ -0.45
NUP98-220ENST00000533346 MVPQ14764 893 aaKnown RBP12.21□□□□□ -0.45
NUP98-220ENST00000533346 ATP2B3Q16720 1220 aa12.21□□□□□ -0.45
NUP98-220ENST00000533346 RBM26Q5T8P6 1007 aaKnown RBP12.21□□□□□ -0.45
NUP98-220ENST00000533346 KRT26Q7Z3Y9 468 aa12.21□□□□□ -0.45
NUP98-220ENST00000533346 KIAA0825Q8IV33 1275 aa12.21□□□□□ -0.45
NUP98-220ENST00000533346 ITPRIPQ8IWB1 547 aa12.21□□□□□ -0.45
NUP98-220ENST00000533346 SERPINA10Q9UK55 444 aa12.21□□□□□ -0.45
NUP98-220ENST00000533346 THSD7BQ9C0I4 1608 aa12.21□□□□□ -0.46
NUP98-220ENST00000533346 TRAF5O00463 557 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 BCAMP50895 628 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 DEFB115Q30KQ5 88 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 NBPF9Q3BBW0 867 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 ANGEL2Q5VTE6 544 aaKnown RBP12.2□□□□□ -0.46
NUP98-220ENST00000533346 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 USP48Q86UV5 1035 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 RPAP2Q8IXW5 612 aaPredicted RBP12.2□□□□□ -0.46
NUP98-220ENST00000533346 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
NUP98-220ENST00000533346 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 SIL1Q9H173 461 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 ZBTB40Q9NUA8 1239 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 GGA3Q9NZ52 723 aa12.2□□□□□ -0.46
NUP98-220ENST00000533346 IGSF3O75054 1194 aa12.19□□□□□ -0.46
NUP98-220ENST00000533346 FKBP1BP68106 108 aa12.19□□□□□ -0.46
NUP98-220ENST00000533346 FMR1Q06787 632 aaKnown RBP eCLIP12.19□□□□□ -0.46
NUP98-220ENST00000533346 CEP85Q6P2H3 762 aa12.19□□□□□ -0.46
NUP98-220ENST00000533346 GNL3LQ9NVN8 582 aaKnown RBP12.19□□□□□ -0.46
NUP98-220ENST00000533346 PPP2R3BQ9Y5P8 575 aa12.19□□□□□ -0.46
NUP98-220ENST00000533346 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
NUP98-220ENST00000533346 A0A1B0GUL7 405 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 SPDYE2BA6NHP3 402 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
NUP98-220ENST00000533346 SPDYE6P0CI01 402 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 TFCP2Q12800 502 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.46
NUP98-220ENST00000533346 DLGAP5Q15398 846 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 APOBEC3FQ8IUX4 373 aaKnown RBP12.18□□□□□ -0.46
NUP98-220ENST00000533346 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 DENND2AQ9ULE3 1009 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 PAPPA2Q9BXP8 1791 aa12.18□□□□□ -0.46
NUP98-220ENST00000533346 MAST3O60307 1309 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 ECE1P42892 770 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 TIMM10P62072 90 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 CFAP100Q494V2 611 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 XAGE2Q96GT9 111 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 ZNF512BQ96KM6 892 aaPredicted RBP12.17□□□□□ -0.46
NUP98-220ENST00000533346 PRMT6Q96LA8 375 aaPredicted RBP12.17□□□□□ -0.46
NUP98-220ENST00000533346 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
NUP98-220ENST00000533346 AKAP11Q9UKA4 1901 aa12.17□□□□□ -0.46
NUP98-220ENST00000533346 UNCXA6NJT0 531 aa12.16□□□□□ -0.46
NUP98-220ENST00000533346 ADM5C9JUS6 153 aa12.16□□□□□ -0.46
NUP98-220ENST00000533346 MYO1BO43795 1136 aa12.16□□□□□ -0.46
NUP98-220ENST00000533346 MAP2K2P36507 400 aa12.16□□□□□ -0.46
NUP98-220ENST00000533346 VEGFBP49765 207 aa12.16□□□□□ -0.46
NUP98-220ENST00000533346 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
NUP98-220ENST00000533346 CDCA5Q96FF9 252 aa12.16□□□□□ -0.46
NUP98-220ENST00000533346 ZDHHC15Q96MV8 337 aa12.16□□□□□ -0.46
NUP98-220ENST00000533346 GBA2Q9HCG7 927 aaPredicted RBP12.16□□□□□ -0.46
NUP98-220ENST00000533346 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.16□□□□□ -0.46
NUP98-220ENST00000533346 LAMB1P07942 1786 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 WDR33Q9C0J8 1336 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms