RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 KAT14Q9H8E8 782 aa14.02□□□□□ -0.17
BDNF-218ENST00000533246 TTC37Q6PGP7 1564 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 ZAP70P43403 619 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 PHKBQ93100 1093 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 N4BP3O15049 544 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 BRD1O95696 1058 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 GABPB1Q06547 395 aaPredicted RBP14.01□□□□□ -0.17
BDNF-218ENST00000533246 KBTBD3Q8NAB2 608 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 DNAI1Q9UI46 699 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 GPAA1O43292 621 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 ZNF853P0CG23 659 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 ODF2Q5BJF6 829 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 CEP135Q66GS9 1140 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
BDNF-218ENST00000533246 TMCO3Q6UWJ1 677 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 CCDC91Q7Z6B0 441 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 SETDB2Q96T68 719 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 ERCC6L2Q5T890 1561 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 KIAA0232Q92628 1395 aa14.01□□□□□ -0.17
BDNF-218ENST00000533246 HOXB7P09629 217 aa14□□□□□ -0.17
BDNF-218ENST00000533246 PDE4BQ07343 736 aa14□□□□□ -0.17
BDNF-218ENST00000533246 LRCH2Q5VUJ6 765 aa14□□□□□ -0.17
BDNF-218ENST00000533246 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
BDNF-218ENST00000533246 UTP14AQ9BVJ6 771 aaKnown RBP14□□□□□ -0.17
BDNF-218ENST00000533246 IFNKQ9P0W0 207 aa14□□□□□ -0.17
BDNF-218ENST00000533246 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
BDNF-218ENST00000533246 EP400NLQ6ZTU2 488 aa14□□□□□ -0.17
BDNF-218ENST00000533246 ANTXR1Q9H6X2 564 aa14□□□□□ -0.17
BDNF-218ENST00000533246 ARMT1Q9H993 441 aa14□□□□□ -0.17
BDNF-218ENST00000533246 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
BDNF-218ENST00000533246 ZSCAN12O43309 604 aa14□□□□□ -0.17
BDNF-218ENST00000533246 LRRC24Q50LG9 513 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 PIK3R5Q8WYR1 880 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 MCM9Q9NXL9 1143 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 MYRIPQ8NFW9 859 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 TPCN1Q9ULQ1 816 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 PRDM15P57071 1507 aaPredicted RBP13.99□□□□□ -0.17
BDNF-218ENST00000533246 KIF5CO60282 957 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 MTIF2P46199 727 aaKnown RBP13.99□□□□□ -0.17
BDNF-218ENST00000533246 ZNF287Q9HBT7 754 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 PICALMQ13492 652 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 LEO1Q8WVC0 666 aaPredicted RBP13.99□□□□□ -0.17
BDNF-218ENST00000533246 PAIP2Q9BPZ3 127 aaKnown RBP13.99□□□□□ -0.17
BDNF-218ENST00000533246 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
BDNF-218ENST00000533246 LIG1P18858 919 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 GSDMDP57764 484 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 SPTY2D1Q68D10 685 aaPredicted RBP13.98□□□□□ -0.17
BDNF-218ENST00000533246 CACNA2D4Q7Z3S7 1137 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 HEATR3Q7Z4Q2 680 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 GPT2Q8TD30 523 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 CRNKL1Q9BZJ0 848 aaKnown RBP13.98□□□□□ -0.17
BDNF-218ENST00000533246 KRT23Q9C075 422 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 TDRD12Q587J7 1177 aaKnown RBP13.98□□□□□ -0.17
BDNF-218ENST00000533246 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 TMEM132AQ24JP5 1023 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 CCDC191Q8NCU4 936 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 PUS3Q9BZE2 481 aaKnown RBP13.98□□□□□ -0.17
BDNF-218ENST00000533246 BABAM1Q9NWV8 329 aa13.98□□□□□ -0.17
BDNF-218ENST00000533246 ADGBQ8N7X0 1667 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 BAG3O95817 575 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 CASQ1P31415 396 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 KIF5BP33176 963 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 USP8P40818 1118 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 RRAGBQ5VZM2 374 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 EFCC1Q9HA90 598 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 MAGEB6P1A0A0J9YX57 407 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 ZNF445P59923 1031 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 TTC31Q49AM3 519 aaPredicted RBP13.97□□□□□ -0.17
BDNF-218ENST00000533246 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
BDNF-218ENST00000533246 PRM3Q9NNZ6 103 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 RBM28Q9NW13 759 aaKnown RBP13.97□□□□□ -0.17
BDNF-218ENST00000533246 TRIM75PA6NK02 468 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 TSPY3P0CV98 308 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 TSPY8P0CW00 308 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 PPP2R5AQ15172 486 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 SYCP1Q15431 976 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 MAPK8IP1Q9UQF2 711 aa13.97□□□□□ -0.17
BDNF-218ENST00000533246 A0A087WWV3 80 aa13.96□□□□□ -0.17
BDNF-218ENST00000533246 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
BDNF-218ENST00000533246 CCDC12Q8WUD4 166 aaPredicted RBP13.96□□□□□ -0.17
BDNF-218ENST00000533246 PHKG2P15735 406 aa13.96□□□□□ -0.17
BDNF-218ENST00000533246 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
BDNF-218ENST00000533246 STAMQ92783 540 aa13.96□□□□□ -0.17
BDNF-218ENST00000533246 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.18
BDNF-218ENST00000533246 FSD2A1L4K1 749 aa13.96□□□□□ -0.18
BDNF-218ENST00000533246 CAVIN2O95810 425 aa13.96□□□□□ -0.18
BDNF-218ENST00000533246 CTDSPL2Q05D32 466 aa13.96□□□□□ -0.18
BDNF-218ENST00000533246 IBTKQ9P2D0 1353 aaPredicted RBP13.96□□□□□ -0.18
BDNF-218ENST00000533246 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 KIF2AO00139 706 aaPredicted RBP13.95□□□□□ -0.18
BDNF-218ENST00000533246 ERLIN1O75477 346 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 MCM7P33993 719 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 SPA17Q15506 151 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 APPBP2Q92624 585 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 TFCP2L1Q9NZI6 479 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 DBNLQ9UJU6 430 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms