RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 PALLDQ8WX93 1383 aa21.08■□□□□ 0.97
UBXN1-213ENST00000532904 MYH14Q7Z406 1995 aaKnown RBP21.08■□□□□ 0.97
UBXN1-213ENST00000532904 CRKLP46109 303 aaKnown RBP21.08■□□□□ 0.96
UBXN1-213ENST00000532904 IFIT5Q13325 482 aaKnown RBP21.08■□□□□ 0.96
UBXN1-213ENST00000532904 PDCL2Q8N4E4 241 aa21.08■□□□□ 0.96
UBXN1-213ENST00000532904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.08■□□□□ 0.96
UBXN1-213ENST00000532904 NGLY1Q96IV0 654 aa21.08■□□□□ 0.96
UBXN1-213ENST00000532904 ZNF594Q96JF6 807 aaPredicted RBP21.08■□□□□ 0.96
UBXN1-213ENST00000532904 CEP126Q9P2H0 1117 aa21.08■□□□□ 0.96
UBXN1-213ENST00000532904 CYP21A2P08686 494 aa21.07■□□□□ 0.96
UBXN1-213ENST00000532904 HSP90B1P14625 803 aaKnown RBP21.07■□□□□ 0.96
UBXN1-213ENST00000532904 MCMDC2Q4G0Z9 681 aa21.07■□□□□ 0.96
UBXN1-213ENST00000532904 AKAP2Q9Y2D5 859 aa21.07■□□□□ 0.96
UBXN1-213ENST00000532904 GPTP24298 496 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 SCRN1Q12765 414 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 CCDC129Q6ZRS4 1044 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 PFKFB2O60825 505 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 ADD1P35611 737 aaKnown RBP21.06■□□□□ 0.96
UBXN1-213ENST00000532904 CTSWP56202 376 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 NAA16Q6N069 864 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-213ENST00000532904 SARM1Q6SZW1 724 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 TTLL11Q8NHH1 800 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 CLIP2Q9UDT6 1046 aa21.06■□□□□ 0.96
UBXN1-213ENST00000532904 IQCB1Q15051 598 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 SYCP1Q15431 976 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 C8orf37Q96NL8 207 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 PUS3Q9BZE2 481 aaKnown RBP21.05■□□□□ 0.96
UBXN1-213ENST00000532904 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
UBXN1-213ENST00000532904 RCOR1Q9UKL0 485 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 TBC1D2BQ9UPU7 963 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 SMTNL1A8MU46 457 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 CTAGE5O15320 804 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 PDE8AO60658 829 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 HMGB1P09429 215 aaKnown RBP21.05■□□□□ 0.96
UBXN1-213ENST00000532904 ITPK1Q13572 414 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 FAM98CQ17RN3 349 aaKnown RBP21.05■□□□□ 0.96
UBXN1-213ENST00000532904 NEUROD6Q96NK8 337 aa21.05■□□□□ 0.96
UBXN1-213ENST00000532904 SEC62Q99442 399 aaKnown RBP21.05■□□□□ 0.96
UBXN1-213ENST00000532904 A0A1B0GUL7 405 aa21.04■□□□□ 0.96
UBXN1-213ENST00000532904 IRS4O14654 1257 aaPredicted RBP21.04■□□□□ 0.96
UBXN1-213ENST00000532904 ATP2B3Q16720 1220 aa21.04■□□□□ 0.96
UBXN1-213ENST00000532904 UTP14CQ5TAP6 766 aaKnown RBP21.04■□□□□ 0.96
UBXN1-213ENST00000532904 KBTBD3Q8NAB2 608 aa21.04■□□□□ 0.96
UBXN1-213ENST00000532904 DNAJC2Q99543 621 aaKnown RBP21.04■□□□□ 0.96
UBXN1-213ENST00000532904 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
UBXN1-213ENST00000532904 THSD7AQ9UPZ6 1657 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 TIMM10P62072 90 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 TAF7LQ5H9L4 462 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 STOX1Q6ZVD7 989 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 NSUN7Q8NE18 718 aaKnown RBP21.03■□□□□ 0.96
UBXN1-213ENST00000532904 CACTINQ8WUQ7 758 aaKnown RBP21.03■□□□□ 0.96
UBXN1-213ENST00000532904 PRDM10Q9NQV6 1147 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 NDUFB9Q9Y6M9 179 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 UBN2Q6ZU65 1347 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 CHGBP05060 677 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 DMTNQ08495 405 aa21.03■□□□□ 0.96
UBXN1-213ENST00000532904 BCORQ6W2J9 1755 aa21.02■□□□□ 0.96
UBXN1-213ENST00000532904 ZSCAN20P17040 1043 aaPredicted RBP21.02■□□□□ 0.96
UBXN1-213ENST00000532904 STX1AQ16623 288 aa21.02■□□□□ 0.96
UBXN1-213ENST00000532904 CCDC144BQ3MJ40 725 aa21.02■□□□□ 0.96
UBXN1-213ENST00000532904 PARP10Q53GL7 1025 aa21.02■□□□□ 0.96
UBXN1-213ENST00000532904 ATL3Q6DD88 541 aa21.02■□□□□ 0.96
UBXN1-213ENST00000532904 DHX32Q7L7V1 743 aaKnown RBP21.02■□□□□ 0.96
UBXN1-213ENST00000532904 CCDC144CPQ8IYA2 1237 aa21.02■□□□□ 0.96
UBXN1-213ENST00000532904 C16orf45Q96MC5 204 aaPredicted RBP21.02■□□□□ 0.96
UBXN1-213ENST00000532904 MYH15Q9Y2K3 1946 aa21.02■□□□□ 0.96
UBXN1-213ENST00000532904 A0A0G2JS52 829 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 ANKRD18BA2A2Z9 1011 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 GOLGA6L19H0YKK7 550 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 CAMTA2O94983 1202 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 TNNT1P13805 278 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 ITGA6P23229 1130 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 CBX1P83916 185 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 CCAR1Q8IX12 1150 aaKnown RBP21.01■□□□□ 0.95
UBXN1-213ENST00000532904 SYNE4Q8N205 404 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 MRFAP1L1Q96HT8 127 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 RIPOR2Q9Y4F9 1068 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 PAXBP1Q9Y5B6 917 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 ABCC12Q96J65 1359 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 LAMB2P55268 1798 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 CTDNEP1O95476 244 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 C11orf57Q6ZUT1 292 aaPredicted RBP21.01■□□□□ 0.95
UBXN1-213ENST00000532904 LRRC2Q9BYS8 371 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 AGXT2Q9BYV1 514 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 PAG1Q9NWQ8 432 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 LRP5O75197 1615 aa21.01■□□□□ 0.95
UBXN1-213ENST00000532904 RGL2O15211 777 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 KCNQ2O43526 872 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 NEMFO60524 1076 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 FGD1P98174 961 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
UBXN1-213ENST00000532904 PTPDC1A2A3K4 754 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 EXOSC10Q01780 885 aaKnown RBP21■□□□□ 0.95
UBXN1-213ENST00000532904 NCBP1Q09161 790 aaKnown RBP21■□□□□ 0.95
UBXN1-213ENST00000532904 RIC1Q4ADV7 1423 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 DSCC1Q9BVC3 393 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 GOLPH3LQ9H4A5 285 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 GREM2Q9H772 168 aa21■□□□□ 0.95
UBXN1-213ENST00000532904 HELLSQ9NRZ9 838 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms