RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 USP17L4A6NCW7 530 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 ADM5C9JUS6 153 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 KCNJ4P48050 445 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 FLIIQ13045 1269 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 USP17L1Q7RTZ2 530 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 TTLL11Q8NHH1 800 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 CCDC102AQ96A19 550 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 GREM2Q9H772 168 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 TSKSQ9UJT2 592 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 SALL2Q9Y467 1007 aaPredicted RBP12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 ZNF609O15014 1411 aa12.28□□□□□ -0.44
PPFIA1-223ENST00000532793 CASP8AP2Q9UKL3 1982 aa12.27□□□□□ -0.44
PPFIA1-223ENST00000532793 EGFRP00533 1210 aa12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 CCT4P50991 539 aaKnown RBP12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 CCDC184Q52MB2 194 aa12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 ANGEL2Q5VTE6 544 aaKnown RBP12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 DNAAF4Q8WXU2 420 aa12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 ABHD8Q96I13 439 aa12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 ANKRD2Q9GZV1 360 aa12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 MYO3BQ8WXR4 1341 aa12.27□□□□□ -0.45
PPFIA1-223ENST00000532793 SCARF1Q14162 830 aa12.26□□□□□ -0.45
PPFIA1-223ENST00000532793 GCKRQ14397 625 aa12.26□□□□□ -0.45
PPFIA1-223ENST00000532793 MYOZ2Q9NPC6 264 aa12.26□□□□□ -0.45
PPFIA1-223ENST00000532793 MINPP1Q9UNW1 487 aa12.26□□□□□ -0.45
PPFIA1-223ENST00000532793 LEMD3Q9Y2U8 911 aa12.26□□□□□ -0.45
PPFIA1-223ENST00000532793 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
PPFIA1-223ENST00000532793 FANCIQ9NVI1 1328 aa12.26□□□□□ -0.45
PPFIA1-223ENST00000532793 PAPPA2Q9BXP8 1791 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 CCDC85CA6NKD9 419 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 H7C1W4 665 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 ITGA6P23229 1130 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 NF2P35240 595 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 ZNF280AP59817 542 aaPredicted RBP12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 LSM11P83369 360 aaKnown RBP eCLIP12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 G2E3Q7L622 706 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 WDR63Q8IWG1 891 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 LINS1Q8NG48 757 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 CDCA5Q96FF9 252 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 COA1Q9GZY4 146 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 HDAC9Q9UKV0 1011 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 PITPNM2Q9BZ72 1349 aa12.25□□□□□ -0.45
PPFIA1-223ENST00000532793 ZNF804BA4D1E1 1349 aa12.24□□□□□ -0.45
PPFIA1-223ENST00000532793 FKBP1BP68106 108 aa12.24□□□□□ -0.45
PPFIA1-223ENST00000532793 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
PPFIA1-223ENST00000532793 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
PPFIA1-223ENST00000532793 DLK2Q6UY11 383 aa12.24□□□□□ -0.45
PPFIA1-223ENST00000532793 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
PPFIA1-223ENST00000532793 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 MMP14P50281 582 aa12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 IFIT5Q13325 482 aaKnown RBP12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 STRIP1Q5VSL9 837 aa12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 ZNF646O15015 1829 aaPredicted RBP12.23□□□□□ -0.45
PPFIA1-223ENST00000532793 ASTN2O75129 1339 aaPredicted RBP12.22□□□□□ -0.45
PPFIA1-223ENST00000532793 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
PPFIA1-223ENST00000532793 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
PPFIA1-223ENST00000532793 DGKZQ13574 1117 aa12.22□□□□□ -0.45
PPFIA1-223ENST00000532793 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
PPFIA1-223ENST00000532793 SAGE1Q9NXZ1 904 aa12.22□□□□□ -0.45
PPFIA1-223ENST00000532793 PCNTO95613 3336 aa12.22□□□□□ -0.45
PPFIA1-223ENST00000532793 FAM155AB1AL88 458 aaPredicted RBP12.21□□□□□ -0.45
PPFIA1-223ENST00000532793 VAMP4O75379 141 aa12.21□□□□□ -0.45
PPFIA1-223ENST00000532793 SLC10A3P09131 477 aa12.21□□□□□ -0.45
PPFIA1-223ENST00000532793 CHRNDQ07001 517 aa12.21□□□□□ -0.45
PPFIA1-223ENST00000532793 FAM9BQ8IZU0 186 aa12.21□□□□□ -0.45
PPFIA1-223ENST00000532793 GMLQ99445 158 aa12.21□□□□□ -0.45
PPFIA1-223ENST00000532793 CSF1RP07333 972 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 GTF2IP78347 998 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 DACT2Q5SW24 774 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 APOBEC3FQ8IUX4 373 aaKnown RBP12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 KIAA0825Q8IV33 1275 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 ZIC5Q96T25 663 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 MCOLN1Q9GZU1 580 aa12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
PPFIA1-223ENST00000532793 F6X3S4 739 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 WNT10BO00744 389 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 MYO1BO43795 1136 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 TRPA1O75762 1119 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 SASH1O94885 1247 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 NBPF9Q3BBW0 867 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 TXNRD3Q86VQ6 643 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 RASAL3Q86YV0 1011 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 CNNM1Q9NRU3 951 aa12.19□□□□□ -0.46
PPFIA1-223ENST00000532793 WTIPA6NIX2 430 aaPredicted RBP12.18□□□□□ -0.46
PPFIA1-223ENST00000532793 GRM8O00222 908 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms