RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CCDC97Q96F63 343 aaPredicted RBP7.96□□□□□ -1.14
USP47-211ENST00000531513 FMNL2Q96PY5 1086 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 RUSC1Q9BVN2 902 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 CHRDQ9H2X0 955 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 KCNF1Q9H3M0 494 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 SOX13Q9UN79 622 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 HGSNATQ68CP4 663 aa7.95□□□□□ -1.14
USP47-211ENST00000531513 FDX2Q6P4F2 183 aa7.95□□□□□ -1.14
USP47-211ENST00000531513 PCSK2P16519 638 aa7.94□□□□□ -1.14
USP47-211ENST00000531513 C8orf34Q49A92 452 aa7.94□□□□□ -1.14
USP47-211ENST00000531513 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
USP47-211ENST00000531513 DTX1Q86Y01 620 aa7.94□□□□□ -1.14
USP47-211ENST00000531513 HIF3AQ9Y2N7 669 aa7.94□□□□□ -1.14
USP47-211ENST00000531513 TAL1P17542 331 aaPredicted RBP7.93□□□□□ -1.14
USP47-211ENST00000531513 MPSTP25325 297 aa7.93□□□□□ -1.14
USP47-211ENST00000531513 C19orf57Q0VDD7 668 aa7.93□□□□□ -1.14
USP47-211ENST00000531513 TMEM102Q8N9M5 508 aaPredicted RBP7.93□□□□□ -1.14
USP47-211ENST00000531513 GAS2O43903 313 aaKnown RBP7.92□□□□□ -1.14
USP47-211ENST00000531513 MZF1P28698 734 aaPredicted RBP7.92□□□□□ -1.14
USP47-211ENST00000531513 EIF1AXP47813 144 aaKnown RBP7.92□□□□□ -1.14
USP47-211ENST00000531513 ZKSCAN3Q9BRR0 538 aa7.92□□□□□ -1.14
USP47-211ENST00000531513 WDR64B1ANS9 1081 aa7.91□□□□□ -1.14
USP47-211ENST00000531513 ARL4DP49703 201 aa7.91□□□□□ -1.14
USP47-211ENST00000531513 SGO2Q562F6 1265 aa7.91□□□□□ -1.14
USP47-211ENST00000531513 VN1R5Q7Z5H4 357 aa7.91□□□□□ -1.14
USP47-211ENST00000531513 TTC16Q8NEE8 873 aa7.91□□□□□ -1.14
USP47-211ENST00000531513 MFSD14AQ96MC6 490 aa7.91□□□□□ -1.14
USP47-211ENST00000531513 OSMRQ99650 979 aa7.91□□□□□ -1.14
USP47-211ENST00000531513 MEGF11A6BM72 1044 aa7.9□□□□□ -1.14
USP47-211ENST00000531513 EREGO14944 169 aa7.9□□□□□ -1.14
USP47-211ENST00000531513 MAP4P27816 1152 aaKnown RBP7.9□□□□□ -1.14
USP47-211ENST00000531513 TXKP42681 527 aa7.9□□□□□ -1.14
USP47-211ENST00000531513 GTF3C2Q8WUA4 911 aaPredicted RBP7.9□□□□□ -1.14
USP47-211ENST00000531513 BSNDQ8WZ55 320 aa7.9□□□□□ -1.14
USP47-211ENST00000531513 PMEPA1Q969W9 287 aa7.9□□□□□ -1.14
USP47-211ENST00000531513 NXPE3Q969Y0 559 aa7.9□□□□□ -1.14
USP47-211ENST00000531513 POLIQ9UNA4 740 aa7.9□□□□□ -1.14
USP47-211ENST00000531513 SOX1O00570 391 aaPredicted RBP7.89□□□□□ -1.15
USP47-211ENST00000531513 YBX3P16989 372 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP47-211ENST00000531513 HOXA10P31260 410 aaPredicted RBP7.89□□□□□ -1.15
USP47-211ENST00000531513 MTMR3Q13615 1198 aa7.89□□□□□ -1.15
USP47-211ENST00000531513 IKBKEQ14164 716 aa7.89□□□□□ -1.15
USP47-211ENST00000531513 CCDC82Q8N4S0 544 aa7.89□□□□□ -1.15
USP47-211ENST00000531513 USP26Q9BXU7 913 aa7.89□□□□□ -1.15
USP47-211ENST00000531513 TMPRSS13Q9BYE2 586 aa7.89□□□□□ -1.15
USP47-211ENST00000531513 LOC100289279A0A1B0GTE1 492 aa7.88□□□□□ -1.15
USP47-211ENST00000531513 PHACTR2O75167 634 aa7.88□□□□□ -1.15
USP47-211ENST00000531513 WNT11O96014 354 aa7.88□□□□□ -1.15
USP47-211ENST00000531513 NUTM2GQ5VZR2 741 aa7.88□□□□□ -1.15
USP47-211ENST00000531513 PIM2Q9P1W9 311 aa7.88□□□□□ -1.15
USP47-211ENST00000531513 FOXD3Q9UJU5 478 aaPredicted RBP7.88□□□□□ -1.15
USP47-211ENST00000531513 TNFRSF21O75509 655 aa7.87□□□□□ -1.15
USP47-211ENST00000531513 TIAF1O95411 115 aa7.87□□□□□ -1.15
USP47-211ENST00000531513 DLGAP3O95886 979 aa7.87□□□□□ -1.15
USP47-211ENST00000531513 SNX29Q8TEQ0 813 aa7.87□□□□□ -1.15
USP47-211ENST00000531513 SUGCTQ9HAC7 445 aa7.87□□□□□ -1.15
USP47-211ENST00000531513 PDIA4P13667 645 aaKnown RBP7.86□□□□□ -1.15
USP47-211ENST00000531513 EDN3P14138 238 aa7.86□□□□□ -1.15
USP47-211ENST00000531513 RXRBP28702 533 aa7.86□□□□□ -1.15
USP47-211ENST00000531513 ALKBH2Q6NS38 261 aa7.86□□□□□ -1.15
USP47-211ENST00000531513 FBXL6Q8N531 539 aa7.86□□□□□ -1.15
USP47-211ENST00000531513 C12orf50Q8NA57 414 aaPredicted RBP7.86□□□□□ -1.15
USP47-211ENST00000531513 SMG8Q8ND04 991 aaKnown RBP7.86□□□□□ -1.15
USP47-211ENST00000531513 ASAP3Q8TDY4 903 aa7.86□□□□□ -1.15
USP47-211ENST00000531513 BHLHE41Q9C0J9 482 aaPredicted RBP7.86□□□□□ -1.15
USP47-211ENST00000531513 LATS2Q9NRM7 1088 aa7.86□□□□□ -1.15
USP47-211ENST00000531513 RNF114Q9Y508 228 aa7.86□□□□□ -1.15
USP47-211ENST00000531513 F13BP05160 661 aa7.85□□□□□ -1.15
USP47-211ENST00000531513 SOX17Q9H6I2 414 aaPredicted RBP7.85□□□□□ -1.15
USP47-211ENST00000531513 CYP4F12Q9HCS2 524 aa7.85□□□□□ -1.15
USP47-211ENST00000531513 ATG3Q9NT62 314 aa7.85□□□□□ -1.15
USP47-211ENST00000531513 ADGRE2Q9UHX3 823 aa7.85□□□□□ -1.15
USP47-211ENST00000531513 ESRRAP11474 423 aaPredicted RBP7.84□□□□□ -1.15
USP47-211ENST00000531513 MSMPQ1L6U9 139 aa7.84□□□□□ -1.15
USP47-211ENST00000531513 PEAR1Q5VY43 1037 aaPredicted RBP7.84□□□□□ -1.15
USP47-211ENST00000531513 SHISA5Q8N114 240 aa7.84□□□□□ -1.15
USP47-211ENST00000531513 GIMAP7Q8NHV1 300 aa7.84□□□□□ -1.15
USP47-211ENST00000531513 LEMD3Q9Y2U8 911 aa7.84□□□□□ -1.15
USP47-211ENST00000531513 TMEM88BA6NKF7 163 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 PPP1R15AO75807 674 aaPredicted RBP7.83□□□□□ -1.16
USP47-211ENST00000531513 DRD2P14416 443 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 NPR3P17342 541 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 SSFA2P28290 1259 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 AAMPQ13685 434 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 ABI1Q8IZP0 508 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 OSBPL1AQ9BXW6 950 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 AMOTL2Q9Y2J4 779 aa7.83□□□□□ -1.16
USP47-211ENST00000531513 ARID1BQ8NFD5 2236 aaPredicted RBP7.82□□□□□ -1.16
USP47-211ENST00000531513 FAM95CA0A1B0GW59 222 aa7.82□□□□□ -1.16
USP47-211ENST00000531513 METTL12A8MUP2 240 aa7.82□□□□□ -1.16
USP47-211ENST00000531513 FZD6O60353 706 aa7.82□□□□□ -1.16
USP47-211ENST00000531513 RANGAP1P46060 587 aaPredicted RBP7.82□□□□□ -1.16
USP47-211ENST00000531513 GSTM4Q03013 218 aa7.82□□□□□ -1.16
USP47-211ENST00000531513 EHHADHQ08426 723 aa7.82□□□□□ -1.16
USP47-211ENST00000531513 CDPF1Q6NVV7 123 aa7.82□□□□□ -1.16
USP47-211ENST00000531513 C2CD4AQ8NCU7 369 aaPredicted RBP7.82□□□□□ -1.16
USP47-211ENST00000531513 FBLIM1Q8WUP2 373 aa7.82□□□□□ -1.16
USP47-211ENST00000531513 FOSL1P15407 271 aa7.81□□□□□ -1.16
USP47-211ENST00000531513 USP5P45974 858 aa7.81□□□□□ -1.16
USP47-211ENST00000531513 USP11P51784 963 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms