RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
SSH3-207ENST00000531495 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
SSH3-207ENST00000531495 WNK4Q96J92 1243 aa16.91■□□□□ 0.3
SSH3-207ENST00000531495 VEZTQ9HBM0 779 aa16.91■□□□□ 0.3
SSH3-207ENST00000531495 COL1A1P02452 1464 aaPredicted RBP16.91■□□□□ 0.3
SSH3-207ENST00000531495 FKBP1AP62942 108 aaKnown RBP16.9■□□□□ 0.3
SSH3-207ENST00000531495 CFAP100Q494V2 611 aa16.9■□□□□ 0.3
SSH3-207ENST00000531495 C15orf52Q6ZUT6 534 aaKnown RBP16.9■□□□□ 0.3
SSH3-207ENST00000531495 G2E3Q7L622 706 aa16.9■□□□□ 0.3
SSH3-207ENST00000531495 DNAAF4Q8WXU2 420 aa16.9■□□□□ 0.3
SSH3-207ENST00000531495 FZD1Q9UP38 647 aa16.9■□□□□ 0.3
SSH3-207ENST00000531495 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
SSH3-207ENST00000531495 PSME4Q14997 1843 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 CLRN2A0PK11 232 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 TAF5LO75529 589 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 FLIIQ13045 1269 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 TNFAIP1Q13829 316 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 ANKRD13AQ8IZ07 590 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 EFCC1Q9HA90 598 aa16.89■□□□□ 0.29
SSH3-207ENST00000531495 SPDYE2BA6NHP3 402 aa16.88■□□□□ 0.29
SSH3-207ENST00000531495 SPDYE6P0CI01 402 aa16.88■□□□□ 0.29
SSH3-207ENST00000531495 IL1R1P14778 569 aa16.88■□□□□ 0.29
SSH3-207ENST00000531495 TAF7LQ5H9L4 462 aa16.88■□□□□ 0.29
SSH3-207ENST00000531495 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
SSH3-207ENST00000531495 PRMT6Q96LA8 375 aaPredicted RBP16.88■□□□□ 0.29
SSH3-207ENST00000531495 TMEM106CQ9BVX2 250 aa16.88■□□□□ 0.29
SSH3-207ENST00000531495 PTPN22Q9Y2R2 807 aa16.88■□□□□ 0.29
SSH3-207ENST00000531495 TNRC18O15417 2968 aaPredicted RBP16.88■□□□□ 0.29
SSH3-207ENST00000531495 IGF2BP3O00425 579 aaKnown RBP eCLIP16.87■□□□□ 0.29
SSH3-207ENST00000531495 WDHD1O75717 1129 aaPredicted RBP16.87■□□□□ 0.29
SSH3-207ENST00000531495 SP3Q02447 781 aa16.87■□□□□ 0.29
SSH3-207ENST00000531495 RASA3Q14644 834 aa16.87■□□□□ 0.29
SSH3-207ENST00000531495 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
SSH3-207ENST00000531495 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
SSH3-207ENST00000531495 NBPF12Q5TAG4 269 aaPredicted RBP16.87■□□□□ 0.29
SSH3-207ENST00000531495 CERS5Q8N5B7 392 aa16.87■□□□□ 0.29
SSH3-207ENST00000531495 PLIN1O60240 522 aa16.86■□□□□ 0.29
SSH3-207ENST00000531495 USP2O75604 605 aaPredicted RBP16.86■□□□□ 0.29
SSH3-207ENST00000531495 CASP7P55210 303 aa16.86■□□□□ 0.29
SSH3-207ENST00000531495 CRHR2Q13324 411 aa16.86■□□□□ 0.29
SSH3-207ENST00000531495 NBPF11Q86T75 865 aa16.86■□□□□ 0.29
SSH3-207ENST00000531495 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
SSH3-207ENST00000531495 CD99L2Q8TCZ2 262 aa16.86■□□□□ 0.29
SSH3-207ENST00000531495 SNAP23O00161 211 aa16.85■□□□□ 0.29
SSH3-207ENST00000531495 LDHAL6AQ6ZMR3 332 aa16.85■□□□□ 0.29
SSH3-207ENST00000531495 CNNM1Q9NRU3 951 aa16.85■□□□□ 0.29
SSH3-207ENST00000531495 TESPA1A2RU30 521 aaPredicted RBP16.84■□□□□ 0.29
SSH3-207ENST00000531495 POTEFA5A3E0 1075 aa16.84■□□□□ 0.29
SSH3-207ENST00000531495 TNNI2P48788 182 aa16.84■□□□□ 0.29
SSH3-207ENST00000531495 HABP4Q5JVS0 413 aaKnown RBP16.84■□□□□ 0.29
SSH3-207ENST00000531495 IL16Q14005 1332 aa16.84■□□□□ 0.29
SSH3-207ENST00000531495 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 OPTNQ96CV9 577 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 ELP3Q9H9T3 547 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 ZFYVE28Q9HCC9 887 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 SERPINA10Q9UK55 444 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 JAG2Q9Y219 1238 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 PCDHAC2Q9Y5I4 1007 aa16.83■□□□□ 0.28
SSH3-207ENST00000531495 GTF2A2P52657 109 aa16.82■□□□□ 0.28
SSH3-207ENST00000531495 FOXO4P98177 505 aa16.82■□□□□ 0.28
SSH3-207ENST00000531495 MFSD14BQ5SR56 506 aa16.82■□□□□ 0.28
SSH3-207ENST00000531495 ZNF70Q9UC06 446 aaPredicted RBP16.82■□□□□ 0.28
SSH3-207ENST00000531495 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
SSH3-207ENST00000531495 IRS2Q9Y4H2 1338 aa16.81■□□□□ 0.28
SSH3-207ENST00000531495 HIBADHP31937 336 aaKnown RBP16.81■□□□□ 0.28
SSH3-207ENST00000531495 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
SSH3-207ENST00000531495 UBE4AQ14139 1066 aa16.81■□□□□ 0.28
SSH3-207ENST00000531495 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
SSH3-207ENST00000531495 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
SSH3-207ENST00000531495 PTPN18Q99952 460 aa16.81■□□□□ 0.28
SSH3-207ENST00000531495 TDRD3Q9H7E2 651 aaKnown RBP16.81■□□□□ 0.28
SSH3-207ENST00000531495 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
SSH3-207ENST00000531495 CSADQ9Y600 493 aa16.81■□□□□ 0.28
SSH3-207ENST00000531495 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
SSH3-207ENST00000531495 EN2P19622 333 aaPredicted RBP16.8■□□□□ 0.28
SSH3-207ENST00000531495 GJA5P36382 358 aa16.8■□□□□ 0.28
SSH3-207ENST00000531495 KIF22Q14807 665 aa16.8■□□□□ 0.28
SSH3-207ENST00000531495 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
SSH3-207ENST00000531495 SLC4A8Q2Y0W8 1093 aa16.8■□□□□ 0.28
SSH3-207ENST00000531495 SLC9C1Q4G0N8 1177 aa16.8■□□□□ 0.28
SSH3-207ENST00000531495 VPS37DQ86XT2 251 aa16.8■□□□□ 0.28
SSH3-207ENST00000531495 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
SSH3-207ENST00000531495 MYH3P11055 1940 aa16.8■□□□□ 0.28
SSH3-207ENST00000531495 CCL15-CCL14A0A0B4J2E2 113 aa16.79■□□□□ 0.28
SSH3-207ENST00000531495 VAMP4O75379 141 aa16.79■□□□□ 0.28
SSH3-207ENST00000531495 CCL15Q16663 113 aa16.79■□□□□ 0.28
SSH3-207ENST00000531495 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
SSH3-207ENST00000531495 TDRD7Q8NHU6 1098 aaKnown RBP16.79■□□□□ 0.28
SSH3-207ENST00000531495 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
SSH3-207ENST00000531495 MS4A4AQ96JQ5 239 aa16.79■□□□□ 0.28
SSH3-207ENST00000531495 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
SSH3-207ENST00000531495 GRM8O00222 908 aa16.78■□□□□ 0.28
SSH3-207ENST00000531495 FRAT2O75474 233 aaPredicted RBP16.78■□□□□ 0.28
SSH3-207ENST00000531495 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
SSH3-207ENST00000531495 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.28
SSH3-207ENST00000531495 F6X3S4 739 aa16.77■□□□□ 0.28
SSH3-207ENST00000531495 CRKP46108 304 aa16.77■□□□□ 0.28
SSH3-207ENST00000531495 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms