RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 HIF3AQ9Y2N7 669 aa9.93□□□□□ -0.82
PTPRK-220ENST00000531466 RNF114Q9Y508 228 aa9.93□□□□□ -0.82
PTPRK-220ENST00000531466 PDGFAP04085 211 aa9.92□□□□□ -0.82
PTPRK-220ENST00000531466 PCSK2P16519 638 aa9.92□□□□□ -0.82
PTPRK-220ENST00000531466 MAP4P27816 1152 aaKnown RBP9.92□□□□□ -0.82
PTPRK-220ENST00000531466 ARL4DP49703 201 aa9.92□□□□□ -0.82
PTPRK-220ENST00000531466 TTC16Q8NEE8 873 aa9.91□□□□□ -0.82
PTPRK-220ENST00000531466 HELQQ8TDG4 1101 aa9.91□□□□□ -0.82
PTPRK-220ENST00000531466 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
PTPRK-220ENST00000531466 RXRBP28702 533 aa9.9□□□□□ -0.82
PTPRK-220ENST00000531466 NOM1Q5C9Z4 860 aaKnown RBP9.9□□□□□ -0.82
PTPRK-220ENST00000531466 FBXL6Q8N531 539 aa9.9□□□□□ -0.82
PTPRK-220ENST00000531466 TMEM102Q8N9M5 508 aaPredicted RBP9.9□□□□□ -0.82
PTPRK-220ENST00000531466 OSMRQ99650 979 aa9.9□□□□□ -0.82
PTPRK-220ENST00000531466 USP26Q9BXU7 913 aa9.9□□□□□ -0.82
PTPRK-220ENST00000531466 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
PTPRK-220ENST00000531466 MPSTP25325 297 aa9.89□□□□□ -0.83
PTPRK-220ENST00000531466 IKBKEQ14164 716 aa9.89□□□□□ -0.83
PTPRK-220ENST00000531466 NUTM2GQ5VZR2 741 aa9.89□□□□□ -0.83
PTPRK-220ENST00000531466 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
PTPRK-220ENST00000531466 ZKSCAN3Q9BRR0 538 aa9.89□□□□□ -0.83
PTPRK-220ENST00000531466 PIM2Q9P1W9 311 aa9.89□□□□□ -0.83
PTPRK-220ENST00000531466 MEGF11A6BM72 1044 aa9.88□□□□□ -0.83
PTPRK-220ENST00000531466 EREGO14944 169 aa9.88□□□□□ -0.83
PTPRK-220ENST00000531466 MZF1P28698 734 aaPredicted RBP9.88□□□□□ -0.83
PTPRK-220ENST00000531466 VN1R5Q7Z5H4 357 aa9.88□□□□□ -0.83
PTPRK-220ENST00000531466 BSNDQ8WZ55 320 aa9.88□□□□□ -0.83
PTPRK-220ENST00000531466 PMEPA1Q969W9 287 aa9.88□□□□□ -0.83
PTPRK-220ENST00000531466 NXPE3Q969Y0 559 aa9.88□□□□□ -0.83
PTPRK-220ENST00000531466 ATG3Q9NT62 314 aa9.88□□□□□ -0.83
PTPRK-220ENST00000531466 YBX3P16989 372 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPRK-220ENST00000531466 EIF1AXP47813 144 aaKnown RBP9.87□□□□□ -0.83
PTPRK-220ENST00000531466 ADGRE2Q9UHX3 823 aa9.87□□□□□ -0.83
PTPRK-220ENST00000531466 KRTAP4-8A0A0G2JLE6 195 aa9.86□□□□□ -0.83
PTPRK-220ENST00000531466 DLGAP3O95886 979 aa9.86□□□□□ -0.83
PTPRK-220ENST00000531466 F13BP05160 661 aa9.86□□□□□ -0.83
PTPRK-220ENST00000531466 ASAP3Q8TDY4 903 aa9.86□□□□□ -0.83
PTPRK-220ENST00000531466 TMPRSS13Q9BYE2 586 aa9.86□□□□□ -0.83
PTPRK-220ENST00000531466 POLIQ9UNA4 740 aa9.86□□□□□ -0.83
PTPRK-220ENST00000531466 LEMD3Q9Y2U8 911 aa9.86□□□□□ -0.83
PTPRK-220ENST00000531466 LOC100289279A0A1B0GTE1 492 aa9.85□□□□□ -0.83
PTPRK-220ENST00000531466 TIAF1O95411 115 aa9.85□□□□□ -0.83
PTPRK-220ENST00000531466 MTMR3Q13615 1198 aa9.85□□□□□ -0.83
PTPRK-220ENST00000531466 ABI1Q8IZP0 508 aa9.85□□□□□ -0.83
PTPRK-220ENST00000531466 SHISA5Q8N114 240 aa9.85□□□□□ -0.83
PTPRK-220ENST00000531466 SMG8Q8ND04 991 aaKnown RBP9.85□□□□□ -0.83
PTPRK-220ENST00000531466 GIMAP7Q8NHV1 300 aa9.85□□□□□ -0.83
PTPRK-220ENST00000531466 GTF3C2Q8WUA4 911 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-220ENST00000531466 OSBPL1AQ9BXW6 950 aa9.85□□□□□ -0.83
PTPRK-220ENST00000531466 PHACTR2O75167 634 aa9.84□□□□□ -0.83
PTPRK-220ENST00000531466 DRD2P14416 443 aa9.84□□□□□ -0.83
PTPRK-220ENST00000531466 CCDC97Q96F63 343 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-220ENST00000531466 CYP4F12Q9HCS2 524 aa9.84□□□□□ -0.83
PTPRK-220ENST00000531466 TNFRSF21O75509 655 aa9.83□□□□□ -0.84
PTPRK-220ENST00000531466 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
PTPRK-220ENST00000531466 SUGCTQ9HAC7 445 aa9.83□□□□□ -0.84
PTPRK-220ENST00000531466 FOXD3Q9UJU5 478 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-220ENST00000531466 ANGEL1Q9UNK9 670 aaKnown RBP9.83□□□□□ -0.84
PTPRK-220ENST00000531466 FAM95CA0A1B0GW59 222 aa9.82□□□□□ -0.84
PTPRK-220ENST00000531466 EDN3P14138 238 aa9.82□□□□□ -0.84
PTPRK-220ENST00000531466 USP11P51784 963 aa9.82□□□□□ -0.84
PTPRK-220ENST00000531466 FBLIM1Q8WUP2 373 aa9.82□□□□□ -0.84
PTPRK-220ENST00000531466 LATS2Q9NRM7 1088 aa9.82□□□□□ -0.84
PTPRK-220ENST00000531466 FOSL1P15407 271 aa9.81□□□□□ -0.84
PTPRK-220ENST00000531466 AAMPQ13685 434 aa9.81□□□□□ -0.84
PTPRK-220ENST00000531466 MSMPQ1L6U9 139 aa9.81□□□□□ -0.84
PTPRK-220ENST00000531466 CDPF1Q6NVV7 123 aa9.81□□□□□ -0.84
PTPRK-220ENST00000531466 PAOXQ6QHF9 649 aa9.81□□□□□ -0.84
PTPRK-220ENST00000531466 SNX29Q8TEQ0 813 aa9.81□□□□□ -0.84
PTPRK-220ENST00000531466 ESRRAP11474 423 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-220ENST00000531466 GSTM4Q03013 218 aa9.8□□□□□ -0.84
PTPRK-220ENST00000531466 BHLHE41Q9C0J9 482 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-220ENST00000531466 SOX17Q9H6I2 414 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-220ENST00000531466 METTL12A8MUP2 240 aa9.79□□□□□ -0.84
PTPRK-220ENST00000531466 ALKBH2Q6NS38 261 aa9.79□□□□□ -0.84
PTPRK-220ENST00000531466 C2CD4AQ8NCU7 369 aaPredicted RBP9.79□□□□□ -0.84
PTPRK-220ENST00000531466 CCDC39Q9UFE4 941 aa9.79□□□□□ -0.84
PTPRK-220ENST00000531466 ADMP35318 185 aa9.78□□□□□ -0.84
PTPRK-220ENST00000531466 EXOSC6Q5RKV6 272 aaKnown RBP9.78□□□□□ -0.84
PTPRK-220ENST00000531466 PEAR1Q5VY43 1037 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-220ENST00000531466 SERPINA10Q9UK55 444 aa9.78□□□□□ -0.84
PTPRK-220ENST00000531466 TBC1D32Q96NH3 1257 aa9.77□□□□□ -0.85
PTPRK-220ENST00000531466 POLR3DP05423 398 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-220ENST00000531466 SOX4Q06945 474 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-220ENST00000531466 CPSF6Q16630 551 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRK-220ENST00000531466 NFXL1Q6ZNB6 911 aa9.76□□□□□ -0.85
PTPRK-220ENST00000531466 PRKAG2Q9UGJ0 569 aa9.76□□□□□ -0.85
PTPRK-220ENST00000531466 AMOTL2Q9Y2J4 779 aa9.76□□□□□ -0.85
PTPRK-220ENST00000531466 CYP26A1O43174 497 aa9.75□□□□□ -0.85
PTPRK-220ENST00000531466 VSIG10LQ86VR7 867 aa9.75□□□□□ -0.85
PTPRK-220ENST00000531466 METTL22Q9BUU2 404 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-220ENST00000531466 FAM170BA6NMN3 283 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 PRNPP04156 253 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 SSFA2P28290 1259 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 EHHADHQ08426 723 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 ZAR1Q86SH2 424 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 TP53INP2Q8IXH6 220 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 YIPF2Q9BWQ6 316 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 NRSN2Q9GZP1 204 aa9.74□□□□□ -0.85
PTPRK-220ENST00000531466 FZD6O60353 706 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms