RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 MYO3BQ8WXR4 1341 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 ADM5C9JUS6 153 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 SASH1O94885 1247 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 ADORA1P30542 326 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 CHAF1AQ13111 956 aaPredicted RBP23.26■■□□□ 1.31
GMDS-208ENST00000530927 SCARF1Q14162 830 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 POLA2Q14181 598 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 MVPQ14764 893 aaKnown RBP23.26■■□□□ 1.31
GMDS-208ENST00000530927 GRIK5Q16478 980 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 NBPF9Q3BBW0 867 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 ZC3H15Q8WU90 426 aaKnown RBP23.26■■□□□ 1.31
GMDS-208ENST00000530927 LPIN2Q92539 896 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 FBXO3Q9UK99 471 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 PCNTO95613 3336 aa23.26■■□□□ 1.31
GMDS-208ENST00000530927 IFIT1P09914 478 aaKnown RBP23.25■■□□□ 1.31
GMDS-208ENST00000530927 SLC5A1P13866 664 aa23.25■■□□□ 1.31
GMDS-208ENST00000530927 ATP8B2P98198 1209 aa23.25■■□□□ 1.31
GMDS-208ENST00000530927 COL1A1P02452 1464 aaPredicted RBP23.25■■□□□ 1.31
GMDS-208ENST00000530927 CAVIN4Q5BKX8 364 aa23.25■■□□□ 1.31
GMDS-208ENST00000530927 ANGEL2Q5VTE6 544 aaKnown RBP23.25■■□□□ 1.31
GMDS-208ENST00000530927 CST9Q5W186 159 aa23.25■■□□□ 1.31
GMDS-208ENST00000530927 AOX1Q06278 1338 aa23.24■■□□□ 1.31
GMDS-208ENST00000530927 FAM205AQ6ZU69 1335 aa23.24■■□□□ 1.31
GMDS-208ENST00000530927 TIMM10P62072 90 aa23.24■■□□□ 1.31
GMDS-208ENST00000530927 CEP85Q6P2H3 762 aa23.24■■□□□ 1.31
GMDS-208ENST00000530927 SSH3Q8TE77 659 aa23.24■■□□□ 1.31
GMDS-208ENST00000530927 CREBZFQ9NS37 354 aa23.24■■□□□ 1.31
GMDS-208ENST00000530927 ARAP2Q8WZ64 1704 aa23.23■■□□□ 1.31
GMDS-208ENST00000530927 TMEM88BA6NKF7 163 aa23.23■■□□□ 1.31
GMDS-208ENST00000530927 MFSD14BQ5SR56 506 aa23.23■■□□□ 1.31
GMDS-208ENST00000530927 OGFOD1Q8N543 542 aa23.23■■□□□ 1.31
GMDS-208ENST00000530927 ZNF408Q9H9D4 720 aa23.23■■□□□ 1.31
GMDS-208ENST00000530927 MKRN1Q9UHC7 482 aaKnown RBP23.23■■□□□ 1.31
GMDS-208ENST00000530927 WNT10BO00744 389 aa23.22■■□□□ 1.31
GMDS-208ENST00000530927 FRAT2O75474 233 aaPredicted RBP23.22■■□□□ 1.31
GMDS-208ENST00000530927 MS4A1P11836 297 aa23.22■■□□□ 1.31
GMDS-208ENST00000530927 PHKA1P46020 1223 aa23.22■■□□□ 1.31
GMDS-208ENST00000530927 CDC37L1Q7L3B6 337 aa23.22■■□□□ 1.31
GMDS-208ENST00000530927 KRT26Q7Z3Y9 468 aa23.22■■□□□ 1.31
GMDS-208ENST00000530927 TRPM7Q96QT4 1865 aa23.22■■□□□ 1.31
GMDS-208ENST00000530927 DCPSQ96C86 337 aaKnown RBP23.21■■□□□ 1.31
GMDS-208ENST00000530927 KLRG1Q96E93 195 aa23.21■■□□□ 1.31
GMDS-208ENST00000530927 A0A1B0GUL7 405 aa23.2■■□□□ 1.3
GMDS-208ENST00000530927 CELF2O95319 508 aaKnown RBP23.2■■□□□ 1.3
GMDS-208ENST00000530927 G3BP1Q13283 466 aaKnown RBP eCLIP23.2■■□□□ 1.33e-7■■■■□ 19.5
GMDS-208ENST00000530927 MYH13Q9UKX3 1938 aa23.2■■□□□ 1.3
GMDS-208ENST00000530927 FKBP1AP62942 108 aaKnown RBP23.19■■□□□ 1.3
GMDS-208ENST00000530927 ZBED3Q96IU2 234 aaPredicted RBP23.19■■□□□ 1.3
GMDS-208ENST00000530927 ZBTB40Q9NUA8 1239 aa23.19■■□□□ 1.3
GMDS-208ENST00000530927 HDAC9Q9UKV0 1011 aa23.19■■□□□ 1.3
GMDS-208ENST00000530927 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
GMDS-208ENST00000530927 SURF6O75683 361 aaKnown RBP23.18■■□□□ 1.3
GMDS-208ENST00000530927 CFAP100Q494V2 611 aa23.18■■□□□ 1.3
GMDS-208ENST00000530927 XAGE2Q96GT9 111 aa23.18■■□□□ 1.3
GMDS-208ENST00000530927 TTF2Q9UNY4 1162 aaKnown RBP23.18■■□□□ 1.3
GMDS-208ENST00000530927 PRAMEF18Q5VWM3 479 aa23.17■■□□□ 1.3
GMDS-208ENST00000530927 CCDC102BQ68D86 513 aa23.17■■□□□ 1.3
GMDS-208ENST00000530927 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
GMDS-208ENST00000530927 ABT1Q9ULW3 272 aaKnown RBP23.17■■□□□ 1.3
GMDS-208ENST00000530927 PDE3AQ14432 1141 aa23.16■■□□□ 1.3
GMDS-208ENST00000530927 SULF1Q8IWU6 871 aa23.16■■□□□ 1.3
GMDS-208ENST00000530927 NEUROD6Q96NK8 337 aa23.16■■□□□ 1.3
GMDS-208ENST00000530927 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
GMDS-208ENST00000530927 DLGAP5Q15398 846 aa23.16■■□□□ 1.3
GMDS-208ENST00000530927 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.16■■□□□ 1.3
GMDS-208ENST00000530927 PRMT6Q96LA8 375 aaPredicted RBP23.16■■□□□ 1.3
GMDS-208ENST00000530927 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
GMDS-208ENST00000530927 CNTNAP1P78357 1384 aa23.15■■□□□ 1.3
GMDS-208ENST00000530927 CLRN2A0PK11 232 aa23.15■■□□□ 1.3
GMDS-208ENST00000530927 RBM5P52756 815 aaKnown RBP eCLIP23.15■■□□□ 1.3
GMDS-208ENST00000530927 CDCA5Q96FF9 252 aa23.15■■□□□ 1.3
GMDS-208ENST00000530927 RRP1P56182 461 aaKnown RBP23.14■■□□□ 1.29
GMDS-208ENST00000530927 AKAP2Q9Y2D5 859 aa23.14■■□□□ 1.29
GMDS-208ENST00000530927 NOP58Q9Y2X3 529 aaKnown RBP23.14■■□□□ 1.29
GMDS-208ENST00000530927 SPDYE2BA6NHP3 402 aa23.13■■□□□ 1.29
GMDS-208ENST00000530927 SPDYE6P0CI01 402 aa23.13■■□□□ 1.29
GMDS-208ENST00000530927 PITPNM2Q9BZ72 1349 aa23.13■■□□□ 1.29
GMDS-208ENST00000530927 RASGRF1Q13972 1273 aa23.12■■□□□ 1.29
GMDS-208ENST00000530927 PI16Q6UXB8 463 aa23.12■■□□□ 1.29
GMDS-208ENST00000530927 MTMR14Q8NCE2 650 aa23.12■■□□□ 1.29
GMDS-208ENST00000530927 ECM29Q5VYK3 1845 aa23.12■■□□□ 1.29
GMDS-208ENST00000530927 RASSF10A6NK89 507 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 PRDX5P30044 214 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 CRKP46108 304 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 VEGFBP49765 207 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 TNNI3KQ59H18 835 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 TBC1D22AQ8WUA7 517 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 GNL3LQ9NVN8 582 aaKnown RBP23.11■■□□□ 1.29
GMDS-208ENST00000530927 TLR7Q9NYK1 1049 aaKnown RBP23.11■■□□□ 1.29
GMDS-208ENST00000530927 TLL2Q9Y6L7 1015 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 FPGT-TNNI3KV9GXZ4 949 aa23.11■■□□□ 1.29
GMDS-208ENST00000530927 MMP14P50281 582 aa23.1■■□□□ 1.29
GMDS-208ENST00000530927 SAPCD2Q86UD0 394 aa23.1■■□□□ 1.29
GMDS-208ENST00000530927 DBNDD2Q9BQY9 259 aa23.1■■□□□ 1.29
GMDS-208ENST00000530927 APBB1O00213 710 aa23.09■■□□□ 1.29
GMDS-208ENST00000530927 GRM1Q13255 1194 aa23.09■■□□□ 1.29
GMDS-208ENST00000530927 DEFB115Q30KQ5 88 aa23.09■■□□□ 1.29
GMDS-208ENST00000530927 CYP4F22Q6NT55 531 aa23.09■■□□□ 1.29
GMDS-208ENST00000530927 PAXIP1Q6ZW49 1069 aaPredicted RBP23.09■■□□□ 1.29
GMDS-208ENST00000530927 MOB2Q70IA6 237 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms