RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 PPP1R7Q15435 360 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 HIBCHQ6NVY1 386 aaPredicted RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 TRIM50Q86XT4 487 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 CEP112Q8N8E3 955 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 FAM76AQ8TAV0 307 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 WHAMMQ8TF30 809 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 SPATA32Q96LK8 384 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 FMN1Q68DA7 1419 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 SMIM23A6NLE4 172 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 HMGB1P09429 215 aaKnown RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 DNA2P51530 1060 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 HDGFL1Q5TGJ6 251 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 ARHGAP22Q7Z5H3 698 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 FAM114A1Q8IWE2 563 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 GPR161Q8N6U8 529 aaKnown RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 PLEKHG4BQ96PX9 1271 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 OCEL1Q9H607 264 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 GJB2P29033 226 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 PAPOLAP51003 745 aaKnown RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 DMPKQ09013 629 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 PRPF4BQ13523 1007 aaKnown RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 ARMCX5Q6P1M9 558 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 PLA2G4DQ86XP0 818 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 SEC62Q99442 399 aaKnown RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 RABL2AQ9UBK7 228 aaPredicted RBP10.06□□□□□ -0.8
CAPRIN1-209ENST00000530820 ANKRD18BA2A2Z9 1011 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 C21orf2O43822 256 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 NEFHP12036 1026 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 ADKP55263 362 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 ZC3H6P61129 1189 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 APBA1Q02410 837 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 POTEDQ86YR6 584 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 SDF4Q9BRK5 362 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 CAPS2Q9BXY5 557 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 DNAAF2Q9NVR5 837 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 ERLIN1O75477 346 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 F13A1P00488 732 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 GUCY1A3Q02108 690 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 PIAS4Q8N2W9 510 aaPredicted RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 USP33Q8TEY7 942 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 FUCA2Q9BTY2 467 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 TMOD4Q9NZQ9 345 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 STK38LQ9Y2H1 464 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 ZNF711Q9Y462 761 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 SERPINC1P01008 464 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 PARP1P09874 1014 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 CYP11B2P19099 503 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 ATF7IPQ6VMQ6 1270 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 CCDC13Q8IYE1 715 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 CCDC170Q8IYT3 715 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 SIX5Q8N196 739 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 IQUBQ8NA54 791 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 CEP295NLQ96MC4 621 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 UBE2OQ9C0C9 1292 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 ITM2BQ9Y287 266 aa10.05□□□□□ -0.8
CAPRIN1-209ENST00000530820 RPGRIP1LQ68CZ1 1315 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 ANKRD33BA6NCL7 494 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 TSPY2A6NKD2 308 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 LDHAP00338 332 aaKnown RBP10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 TSPY3P0CV98 308 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 TSPY8P0CW00 308 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 ERFP50548 548 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 TSPY1Q01534 308 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 FOXD4Q12950 439 aaPredicted RBP10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 MORC4Q8TE76 937 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.04□□□□□ -0.83e-12■■■□□ 15.2
CAPRIN1-209ENST00000530820 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.04□□□□□ -0.82e-11■□□□□ 8
CAPRIN1-209ENST00000530820 HOOK1Q9UJC3 728 aaKnown RBP10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 ZSCAN9O15535 394 aaPredicted RBP10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 LARGE1O95461 756 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 SLC4A2P04920 1241 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 TXLNAP40222 546 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 NCAPH2Q6IBW4 605 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 RAVER1Q8IY67 606 aaKnown RBP10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 SPAG5Q96R06 1193 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 LRRC27Q9C0I9 530 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 L2HGDHQ9H9P8 463 aa10.04□□□□□ -0.8
CAPRIN1-209ENST00000530820 CPP00450 1065 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 ATP1A3P13637 1013 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 MTF1Q14872 753 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 ME3Q16798 604 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 FAM81AQ8TBF8 368 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 ARPC5LQ9BPX5 153 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 THUMPD2Q9BTF0 503 aaKnown RBP10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 PREBQ9HCU5 417 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 PLCB1Q9NQ66 1216 aa10.03□□□□□ -0.8
CAPRIN1-209ENST00000530820 THRAP3Q9Y2W1 955 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms